BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,266,044	C→T	intergenic (‑16/+83)	tdcB ← / ← tdcA	catabolic threonine dehydratase/DNA‑binding transcriptional activator TdcA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,266,044	0	C	T	100.0%	471.3 / NA	130	intergenic (‑16/+83)	tdcB/tdcA	catabolic threonine dehydratase/DNA‑binding transcriptional activator TdcA
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (70/60); total (70/60)

Only 100 of 131 total aligned reads displayed.

TGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGCCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACTTCTATTAATTGCCTTCGTCTACACCCATTATAAGATGAATACT  >  NC_000913/3265908‑3266179

tGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGTCTg                                                                                                                                      <  2:8610/140‑1 (MQ=255)

tGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGTCTg                                                                                                                                      >  1:596815/1‑140 (MQ=255)

tGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGTCTg                                                                                                                                      >  1:8610/1‑140 (MQ=255)

 gCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGTCTGa                                                                                                                                     >  2:1959721/1‑140 (MQ=255)

  cAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGTCTGaa                                                                                                                                    <  1:636814/140‑1 (MQ=255)

     cGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGTCTGAATTa                                                                                                                                 <  2:596815/140‑1 (MQ=255)

       ttCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGTCTGAATTaa                                                                                                                                >  1:507257/1‑139 (MQ=255)

        tctcTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGTCTGAATTAAat                                                                                                                              <  1:1959721/137‑1 (MQ=255)

          aCTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGTCt                                                                                                                                       >  2:1366871/1‑129 (MQ=255)

               aaTAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGTCTGAATTAAATATGTAgg                                                                                                                       >  1:1615175/1‑140 (MQ=255)

                      ggAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGgtaaccgt                                                                                                                >  1:897411/1‑140 (MQ=255)

                      ggAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGgtaaccg                                                                                                                 <  1:1234571/139‑1 (MQ=255)

                        aGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGgtaaccgtaa                                                                                                              >  1:1960842/1‑140 (MQ=255)

                            aGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGa                                                                                                          >  1:438176/1‑140 (MQ=255)

                             ggCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGac                                                                                                         <  2:107777/140‑1 (MQ=255)

                             ggCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGac                                                                                                         <  2:1615175/140‑1 (MQ=255)

                             ggCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGac                                                                                                         <  1:638406/140‑1 (MQ=255)

                             ggCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGac                                                                                                         <  1:1869466/140‑1 (MQ=255)

                                 tGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCt                                                                                                     >  1:63599/1‑140 (MQ=255)

                                  gCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTg                                                                                                    >  1:984201/1‑140 (MQ=255)

                                   ccTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGc                                                                                                   >  1:776163/1‑140 (MQ=255)

                                       ttttATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAaga                                                                                               <  2:747844/140‑1 (MQ=255)

                                       ttttATAAAGTGGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCCTCAATAGCAACCGGCAGATCGTTTGTAATTTGCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAaga                                                                                               >  2:1952788/1‑140 (MQ=255)

                                         ttATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTTAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAagaca                                                                                             >  1:374755/1‑140 (MQ=255)

                                         ttATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCaa                                                                                                 <  2:1890170/136‑1 (MQ=255)

                                         ttATAAATTCGCCCAGCCAGTCGTTATTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCaa                                                                                                 >  1:1890170/1‑136 (MQ=255)

                                           ataAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAagacaga                                                                                           <  2:1780910/140‑1 (MQ=255)

                                            taAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAagacagac                                                                                          >  2:649338/1‑140 (MQ=255)

                                              aaTTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGacagacag                                                                                        <  2:683557/140‑1 (MQ=255)

                                               aTTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAgg                                                                                       <  2:897411/140‑1 (MQ=255)

                                                   gCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTgg                                                                                    <  1:1500632/139‑1 (MQ=255)

                                                   gCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTgg                                                                                    >  2:1500632/1‑139 (MQ=255)

                                                   gCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGa                                                                                   <  1:1090049/140‑1 (MQ=255)

                                                   gCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGa                                                                                   <  1:656216/140‑1 (MQ=255)

                                                             tCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGt                                                                         >  2:459824/1‑140 (MQ=255)

                                                                     tCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGTCAGACAGGTGGATTATTTATGTTtaaataa                                                                 >  2:455097/1‑140 (MQ=255)

                                                                     tCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTtaaataa                                                                 <  2:1960842/140‑1 (MQ=255)

                                                                       gCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATaaaa                                                               >  2:729480/1‑140 (MQ=255)

                                                                        cTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATaaaaa                                                              >  2:453750/1‑140 (MQ=255)

                                                                             ataatGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAAt                                                         >  2:1429075/1‑140 (MQ=255)

                                                                                atGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGTCAGACAGGTGGATTATTTATGTTTAAATAAAAACAAAtaac                                                      <  1:455097/140‑1 (MQ=255)

                                                                                     atcaATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAAcc                                                 >  2:598410/1‑140 (MQ=255)

                                                                                          tAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACtt                                            >  1:1587583/1‑140 (MQ=255)

                                                                                             cAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACTTCTa                                         >  1:583594/1‑140 (MQ=255)

                                                                                               aCCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACTTCTAtt                                       >  1:365785/1‑140 (MQ=255)

                                                                                                ccGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACTTCTATTa                                      >  2:1509336/1‑140 (MQ=255)

                                                                                                    cAGATCGTATGTAATATGCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACTTCTATTAATTg                                  >  2:1443574/1‑140 (MQ=255)

                                                                                                      gATCGTATGTAATATGCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACTTCTATTAATTGcc                                <  1:649338/140‑1 (MQ=255)

                                                                                                      gATCGTATGTAATATGCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACTTCTATTAATTGcc                                <  1:1509336/140‑1 (MQ=255)

                                                                                                      gATCGTATGTAATATGCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGATAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACTTCTATTAATTGcc                                <  2:1860380/140‑1 (MQ=255)

                                                                                                       aTCGTATGTAATATGCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACTTCTATTAATTGCCt                               <  1:729480/140‑1 (MQ=255)

                                                                                                       aTCGTATGTAATATGCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACTTCTATTAATTGCCt                               <  2:738705/140‑1 (MQ=255)

                                                                                                       aTCGTATGTAATATGCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACTTCTATTAATTGCCt                               >  2:1527093/1‑140 (MQ=255)

                                                                                                       aTCGTATGTAATATGCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACTTCTATTAATTGCCt                               <  2:1587583/140‑1 (MQ=255)

                                                                                                        tCGTATGTAATATGCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACTTCTATTAATTGCCtt                              <  1:459824/140‑1 (MQ=255)

                                                                                                           tATGTAATATGCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACTTCTATTAATTGCCTTCGt                           >  2:771436/1‑140 (MQ=255)

                                                                                                             tGTAATATGCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACTTCTATTAATTGCCTTCGTCt                         <  1:771436/140‑1 (MQ=255)

                                                                                                             tGTAATATGCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACTTCTATTAATTGCCTTCGTCt                         <  2:374755/140‑1 (MQ=255)

                                                                                                              gTAATATGCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACTTCTATTAATTGCCTTCGTCTa                        <  1:803051/140‑1 (MQ=255)

                                                                                                               tAATATGCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACTTCTATTAATTGCCTTCGTCTac                       >  1:713231/1‑140 (MQ=255)

                                                                                                                 atatGCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACTTCTATTAATTGCCt                               <  1:1680252/130‑1 (MQ=255)

                                                                                                                 atatGCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACTTCTATTAATTGCCt                               >  2:1680252/1‑130 (MQ=255)

                                                                                                                  tatGCATTATAGAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACTTCTATTAATTGCCTTCGTCTACAcc                    <  1:151605/140‑1 (MQ=255)

                                                                                                                  tatGCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACTTCTATTAATTGCCTTCGTCTa                        <  1:1900765/136‑1 (MQ=255)

                                                                                                                  tatGCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACTTCTATTAATTGCCTTCGTCTa                        <  1:1667454/136‑1 (MQ=255)

                                                                                                                  tatGCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACTTCTATTAATTGCCTTCGTCTa                        >  2:1667454/1‑136 (MQ=255)

                                                                                                                  tatGCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACTTCTATTAATTGCCTTCGTCTACAcc                    >  1:1611230/1‑140 (MQ=255)

                                                                                                                  tatGCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACTTCTATTAATTGCCTTCGTCTACAcc                    <  1:1429075/140‑1 (MQ=255)

                                                                                                                    tGCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACTTCTATTAATTGCCTTCGTCTACACCCa                  >  2:406164/1‑140 (MQ=255)

                                                                                                                     gCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACTTCTATTAATTGCCTTCGTc                          <  1:757101/131‑1 (MQ=255)

                                                                                                                     gCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACTTCTATTAATTGCCTTCGTc                          >  2:757101/1‑131 (MQ=255)

                                                                                                                     gCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACTTCTATTAATTGCCTTCGTCTacac                     >  2:718020/1‑136 (MQ=255)

                                                                                                                     gCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACTTCTATTAATTGCCTTCGTCTacac                     <  1:718020/136‑1 (MQ=255)

                                                                                                                     gCATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACTTCTATTAATTGCCTTCGTCTACACCCAt                 >  2:1117540/1‑140 (MQ=255)

                                                                                                                      cATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAGGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACTTCTATTAATTGCCTTCGTCTACACCCAtt                <  2:63599/140‑1 (MQ=255)

                                                                                                                      cATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACTTCTATTAATTGcc                                <  2:1701358/124‑1 (MQ=255)

                                                                                                                      cATTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACTTCTATTAATTGCCTTCGTCTACACCCAtt                <  1:1443574/140‑1 (MQ=255)

                                                                                                                       aTTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACTTCTATTAATTGcc                                <  1:1018782/123‑1 (MQ=255)

                                                                                                                       aTTATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACTTCTATTAATTGCCTTCGTCTACACCCATta               >  2:1225083/1‑140 (MQ=255)

                                                                                                                        ttATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACTTCTATTAATTGCCTTCGTCTACACCCATtat              <  1:453750/140‑1 (MQ=255)

                                                                                                                        ttATAAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACTTCTATTAATTGCCTTCGTCTACACCCATtat              <  1:1952788/140‑1 (MQ=255)

                                                                                                                         tataAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACTTCTATTAATTGCCTTCGTCTACACCCATtata             >  2:108134/1‑140 (MQ=255)

                                                                                                                         tataAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACTTCTATTAATTGCCTTCGTCTACACCCATtata             >  1:1671150/1‑140 (MQ=255)

                                                                                                                         tataAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACTTCTATTAATTGCCTTCGTCTACACCCATtata             >  1:1637050/1‑140 (MQ=255)

                                                                                                                          ataAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACTTCTATTAATTGCCTTCGTCTACACCCATTATaa            <  1:108134/140‑1 (MQ=255)

                                                                                                                          ataAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACTTCTATTAATTGCCTTCGTCTACACCCATTATaa            <  2:365785/140‑1 (MQ=255)

                                                                                                                          ataAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACTTCTATTAATTGCCTTCGTCTACACCCATTATaa            <  1:1156595/140‑1 (MQ=255)

                                                                                                                           taAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACTTCTATTAATTGCCTTCGTCTacac                     >  2:1635152/1‑130 (MQ=255)

                                                                                                                           taAAACCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACTTCTATTAATTGCCTTCGTCTACACCCATTATAAg           >  1:243228/1‑140 (MQ=255)

                                                                                                                             aaaCCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACTTCTATTAATTGCCTTCGTCTACACCCATTATAAGAt         <  2:395042/140‑1 (MQ=255)

                                                                                                                              aaCCTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACTTCTATTAATTGCCTTCGTCTACACCCATTATAAGATg        >  2:431255/1‑140 (MQ=255)

                                                                                                                                ccTCTTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACTTCTATTAATTGCCTTCGTCTACACCCATTATAAGATGaa      <  2:583594/140‑1 (MQ=255)

                                                                                                                                   ctTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACTTCTATTAATTGCCTTCGTCTACACCCATTATAAGATGAATAc   >  2:379949/1‑140 (MQ=255)

                                                                                                                                   ctTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACTTCTATTAATTGCCTTCGTCTACACCCATTATAAGATGAATAc   >  2:672410/1‑140 (MQ=255)

                                                                                                                                   ctTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACTTCTATTAATTGCCTTCGTCTACACCCATTATAAGATGAATAc   >  2:1918901/1‑140 (MQ=255)

                                                                                                                                   ctTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACTTCTATTAATTGCCTTCGTCTACACCCATTATAAGATGAATAc   >  2:1386461/1‑140 (MQ=255)

                                                                                                                                   ctTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACTTCTATTAATTGCCTTCGTCTACACCCATTATAAGATGAATAc   >  2:12242/1‑140 (MQ=255)

                                                                                                                                   ctTCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACTTCTATTAATTGCCTTCGTCTACACCCATTATAAGATGAATAc   >  2:1189941/1‑140 (MQ=255)

                                                                                                                                    ttCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACTTCTATTAATTGCCTTCGTCTACACCCATTATAAGATGAATAct  >  1:662496/1‑140 (MQ=255)

                                                                                                                                    ttCGTCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACTTCTATTAATTGCCTTCGTCTACACCCATTATAAGATGAATAct  >  2:919024/1‑140 (MQ=255)

TGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAATATGCATTATAAAACCTCTTCGCCTGAATTAAATATGTAGGTAACCGTAACCGACACCTGCAAGACAGACAGGTGGATTATTTATGTTTAAATAAAAACAAATAACTAACCAACTTCTATTAATTGCCTTCGTCTACACCCATTATAAGATGAATACT  >  NC_000913/3265908‑3266179

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`