| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,455,442 | T→C | T69A (ACC→GCC) | yfcV ← | putative fimbrial protein YfcV |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,455,442 | 0 | T | C | 98.7% | 580.7 / ‑3.6 | 150 | T69A (ACC→GCC) | yfcV | putative fimbrial protein YfcV |
| Reads supporting (aligned to +/- strand): ref base T (1/1); new base C (83/65); total (84/66) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
Only 100 of 152 total aligned reads displayed.
TGAAAATGGTGTAATAATTGCCGCTATTTGCAGAAGAAACGGTACCAGTAAAGGTAGTGGTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGTGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAGTTTGTGATCGTCCGGAACGATAGAACACACTGAGTCTTCAATGGTGCCGTAAAAACGTGCAGTACCGTTGTTACCCGCAGCGAT > NC_000913/2455316‑2455577 | gAAAATGGTGTAATAATTGCCGCTATTTGCAGAAGAAACGGTACCAGTAAAGGTAGTGGTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCa > 2:1146813/1‑140 (MQ=255) ggTGTAATAATTGCCGCTATTTGCAGAAGAAACGGTACCAGTAAAGGTAGTGGTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAg > 2:1856125/1‑135 (MQ=255) ggTGTAATAATTGCCGCTATTTGCAGAAGAAACGGTACCAGTAAAGGTAGTGGTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAg < 1:1856125/135‑1 (MQ=255) ggTGTAATAATTGCCGCTATTTGCAGAAGAAACGGTACCAGTAAAGGTAGTGGTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGttttt > 2:1224961/1‑140 (MQ=255) tgtAATAATTGCCGCTATTTGCAGAAGAAACGGTACCAGTAAAGGTAGTGGTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCg > 2:1882304/1‑140 (MQ=255) tgtAATAATTGCCGCTATTTGCAGAAGAAACGGTACCAGTAAAGGTAGTGGTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCg > 1:160955/1‑140 (MQ=255) tgtAATAATTGCCGCTATTTGCAGAAGAAACGGTACCAGTAAAGGTAGTGGTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCg > 2:742302/1‑140 (MQ=255) gtAATAATTGCCGCTATTTGCAGAAGAAACGGTACCAGTAAAGGTAGTGGTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCgg > 2:404163/1‑140 (MQ=255) taataaTTGCCGCTATTTGCAGAAGAAACGGTACCAGTAAAGGTAGTGGTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGc > 1:1841002/1‑140 (MQ=255) aataatTGCCGCTATTTGCAGAAGAAACGGTACCAGTAAAGGTAGTGGTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCa < 1:753838/140‑1 (MQ=255) ataatTGCCGCTATTTGCAGAAGAAACGGTACCAGTAAAGGTAGTGGTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCAc < 2:704637/140‑1 (MQ=255) ataatTGCCGCTATTTGCAGAAGAAACGGTACCAGTAAAGGTAGTGGTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCAc < 1:887884/140‑1 (MQ=255) ataatTGCCGCTATTTGCAGAAGAAACGGTACCAGTAAAGGTAGTGGTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCAc < 1:1111934/140‑1 (MQ=255) ttGCCGCTATTTGCAGAAGAAACGGTACCAGTAAAGGTAGTGGTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGat > 2:485007/1‑140 (MQ=255) tGCCGCTATTTGCAGAAGAAACGGTACCAGTAAAGGTAGTGGTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGata < 2:198406/140‑1 (MQ=255) gCCGCTATTTGCAGAAGAAACGGTACCAGTAAAGGTAGTGGTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGTGCCGTTATTTTTCAGTTTTTCGGCACCGatat > 2:157807/1‑140 (MQ=255) gCCGCTATTTGCAGAAGAAACGGTACCAGTAAAGGTAGTGGTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGatat > 2:1799409/1‑140 (MQ=255) gCCGCTATTTGCAGAAGAAACGGTACCAGTAAAGGTAGTGGTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGatat > 2:1615229/1‑140 (MQ=255) gCCGCTATTTGCAGAAGAAACGGTACCAGTAAAGGTAGTGGTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGatat > 1:1625261/1‑140 (MQ=255) gCCGCTATTTGCAGAAGAAACGGTACCAGTAAAGGTAGTGGTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGatat > 2:1663466/1‑140 (MQ=255) gCCGCTATTTGCAGAAGAAACGGTACCAGTAAAGGTAGTGGTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGatat > 1:9656/1‑140 (MQ=255) gCCGCTATTTGCAGAAGAAACGGTACCAGTAAAGGTAGTGGTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTCTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCa > 1:202014/1‑133 (MQ=255) cGCTATTTGCAGAAGAAACGGTACCAGTAAAGGTAGTGGTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCg > 2:1056802/1‑134 (MQ=255) cGCTATTTGCAGAAGAAACGGTACCAGTAAAGGTAGTGGTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCa < 1:437197/140‑1 (MQ=255) gCTATTTGCAGAAGAAACGGTACCAGTAAAGGTAGTGGTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCTAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCAc > 1:985962/1‑140 (MQ=255) aTTTGCAGAAGAAACGGTACCAGTAAAGGTAGTGGTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCa < 1:1261699/140‑1 (MQ=255) tGCAGAAGAAACGGTACCAGTAAAGGTAGTGGTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCatat < 1:1663466/140‑1 (MQ=255) gCAGAAGAAACGGTACCAGTAAAGGTAGTGGTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATc < 1:1154635/140‑1 (MQ=255) aagaaACGGTACCAGTAAAGGTAGTGGTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACt > 2:1013181/1‑140 (MQ=255) aagaaACGGTACCAGTAAAGGTAGTGGTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACt < 1:1224961/140‑1 (MQ=255) agaaACGGTACCAGTAAAGGTAGTGGTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACtt > 1:258448/1‑140 (MQ=255) gaaACGGTACCAGTAAAGGTAGTGGTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTc < 1:833907/140‑1 (MQ=255) gaaACGGTACCAGTAAAGGTAGTGGTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTc < 1:1032656/140‑1 (MQ=255) aaaCGGTACCAGTAAAGGTAGTGGTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTcc > 2:1915578/1‑140 (MQ=255) aCGGTACCAGTAAAGGTAGTGGTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATc > 2:1425292/1‑131 (MQ=255) aCGGTACCAGTAAAGGTAGTGGTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATc < 1:1425292/131‑1 (MQ=255) aCGGTACCAGTAAAGGTAGTGGTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAg > 1:951823/1‑140 (MQ=255) aCGGTACCAGTAAAGGTAGTGGTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAg > 1:121229/1‑140 (MQ=255) aCGGTACCAGTAAAGGTAGTGGTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAg > 1:1333060/1‑140 (MQ=255) ggTACCAGTAAAGGTAGTGGTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAGtt < 1:1915578/140‑1 (MQ=255) aaaGGTAGTGGTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAGTTTGTGATCGt > 2:980332/1‑140 (MQ=255) aaGGTAGTGGTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAGTTTGTGATCGTc > 1:579032/1‑140 (MQ=255) ggTAGTGGTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCa < 2:1544606/125‑1 (MQ=255) ggTAGTGGTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCa > 1:1544606/1‑125 (MQ=255) ggTAGTGGTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAGTTTGTGATCGTCCg > 2:1658083/1‑140 (MQ=255) gTAGTGGTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAGTTtgtg > 1:1633180/1‑131 (MQ=255) gTAGTGGTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAGTTtgtg < 2:1633180/131‑1 (MQ=255) gTAGTGGTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAGTTTGTGATCGTCCgg < 1:1013181/140‑1 (MQ=255) gTAGTGGTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAGTTTGTGATCGTCCgg < 1:1841588/140‑1 (MQ=255) gTAGTGGTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAGTTTGTGATCGTCCgg < 1:1898589/140‑1 (MQ=255) aGTGGTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAGTTTGTGATCGTCCGGaa > 1:1625767/1‑140 (MQ=255) gTGGTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAGTTTGTGATCGTCCGGAAc > 2:802275/1‑140 (MQ=255) gTGGTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAGTTTGTGATCGTCCGGAAc > 2:1087843/1‑140 (MQ=255) ggTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAGTTTGTGATCGTCCGGAACGa > 2:607616/1‑140 (MQ=255) ggTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAGTTTGTGATCGTCCGGAACGa > 1:92059/1‑140 (MQ=255) ggTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAGTTTGTGATCGTCCGGAACGa > 1:608427/1‑140 (MQ=255) ggTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAGTTTGTGATCGTCCGGAACGa > 1:669772/1‑140 (MQ=255) ggTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAGTTTGTGATCGTCCGGAACGa > 1:210475/1‑140 (MQ=255) ggTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAGTTTGTGATCGTCCGGAACGa > 2:1386595/1‑140 (MQ=255) ggTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAGTTTGTGATCGTCCGGAACGa > 2:736960/1‑140 (MQ=255) ggTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTA‑TTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAGTTTGTGATCGTCCGGAACGAt > 2:214289/1‑140 (MQ=255) gTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAGTTTGTGATCGTCCGGAACGAt < 1:95943/140‑1 (MQ=255) aTTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAGTTTGTGATCGTCCGGAACGATAGa > 2:1550245/1‑140 (MQ=255) ttGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAGTTTGTGATCGTCCGGAACGATAGaa > 1:1416688/1‑140 (MQ=255) ccTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAGTTTGTGATCGTCCGGAACGATAGAACACACt > 2:334394/1‑140 (MQ=255) ccTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAGTTTGTGATCGTCCGGAACGATAGAACACACt < 1:1550245/140‑1 (MQ=255) ccTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAGTTTGTGATCGTCCGGAACGATAGAACACACt > 1:1633172/1‑140 (MQ=255) tGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAGTTTGTGATCGTCCGGAACGATAGAACACACTGa < 2:669772/140‑1 (MQ=255) tGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAGTTTGTGATCGTCCGGAACGATAGAACACACTGa < 1:802275/140‑1 (MQ=255) tGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAGTTTGTGATCGTCCGGAACGATAGAACACACTGa < 1:773233/140‑1 (MQ=255) tGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAGTTTGTGATCGTCCGGAACGATAGAACACACTGa < 2:116916/140‑1 (MQ=255) aGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAGTTTGTGATCGTCCGGAACGATAGAACACACTGAGt > 2:1751927/1‑140 (MQ=255) gTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAGTTTGTTATCGTCCGGAACGATAGAACACACTGAGTc < 2:951823/140‑1 (MQ=255) gTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAGTTTGTGATCGTCCGGAACGATAGAACACACt < 2:1510668/135‑1 (MQ=255) tATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAGTTTGTGACCGTCCGGAACGATAGAACACACTGAGTCt > 2:1318725/1‑140 (MQ=255) aTCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAGTTTGTGATCGTCCGGAACGATAGAacaca > 1:451702/1‑131 (MQ=255) tCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAGTTTGTGATCGTCCGGAACGATAGAACACACTGAGTCTTc > 1:1775665/1‑140 (MQ=255) cAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAGTTTGTGATCGTCCGGAACGATAGAaca > 2:888393/1‑127 (MQ=255) aaaTACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAGTTTGTGATCGTCCGGAACGATAGAACACACTGAGTCTTCaa < 2:121229/140‑1 (MQ=255) aCGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAGTTTGTGATCGTCCGGAACGATAGAACACACTGAGTCTTCAATGGt > 2:791396/1‑140 (MQ=255) cGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAGTTTGTGATCGTCCGGAACGATAGAACACACTGAGTCTTCAATGGTg < 1:1751927/140‑1 (MQ=255) gCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAGTTTGTGATCGTCCGGAACGATAGAACACACTGAGTCTTCAATGGTGc > 2:1587727/1‑140 (MQ=255) gCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAGTTTGTGATCGTCCGGAACGATAGAACACACTGAGTCTTCAATGGTGc > 1:1156301/1‑140 (MQ=255) tCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAGTTTGTGATCGTCCGGAACGATAGAACACACTGAGTCTTCAATGGTGCCGTa > 2:877502/1‑140 (MQ=255) tGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAGTTTGTGATCGTCCGGAACGATAGAACACACTGAGTCTTCAATGGTGCCGTaaaa > 1:378536/1‑140 (MQ=255) cAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAGTTTGTGATCGTCCGGAACGATAGAACACACTGAGTCTTCAATGGTGCCGTAAAAAc > 1:1917255/1‑140 (MQ=255) cAGGCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAGTTTGTGATCGTCCGGAACGATAGAACACACTGAGTCTTCAATGGTGCCGTAAAAAc > 2:922112/1‑140 (MQ=255) gCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAGTTTGTGATCGTCCGGAACGATAGAACACACTGAGTCTTCAATGGTGCCGTAAAAACGTg < 1:1087843/140‑1 (MQ=255) gCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAGTTTGTGATCGTCCGGAACGATAGAACACACTGAGTCTTCAATGGTGCCGTAAAAACGTg < 1:370221/140‑1 (MQ=255) gCGAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGAACCGATATCACCCATATCAACTTCCAGTTTGTGATCGTCCGGAACGATAGAACACACTGAGTCTTCAATGGTGCCGTAAAAACGTg < 1:853860/140‑1 (MQ=255) gCGAATCTGGAAATTTTTCGGCGTGCGGGCGCCGTTATTTTTCAATTTTTCGGCACCGATATCACCCAAATCAACTTCCAGTTTGTGATCGTCCGGAACGATAGAACACACTGAGTCTTCAATGGTGCCGTAAAAACGTg > 2:1447234/1‑140 (MQ=255) gAATCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAGTTTGTGATCGTCCGGAACGATAGAACACACTGAGTCTTCAATGGTGCCGTAAAAACGTGCa > 1:57948/1‑140 (MQ=255) aaTCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAGTTTGTGACCGTCCGGAACGATAGAACACACTGAGTCTTCAATGGTGCCGTAAAAACGTGCAg < 1:1318725/140‑1 (MQ=255) aTCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAGTTTGTGATCGTCCGGAACGATAGAACACACTGAGTCTTCAATGGTGCCGTAAAAACGTGCAGt > 2:370191/1‑140 (MQ=255) tCTGGAAATTTTTCGGCGTGGTGGTGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAGTTTGTGATCGTCCGGAACGATAGAACACACTGAGTCTTCAATGGTGCCGTAAAAACGTGCAGTa < 1:157807/140‑1 (MQ=255) tCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAGTTTGTGATCGTCCGGAACGATAGAACACACTGAGTCTTCAATGGTGCCGTAAAAACGTGCAGTa < 2:1101569/140‑1 (MQ=255) tCTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAGTTTGTGATCGTCCGGAACGATAGAACACACTGAGTCTTCAATGGTGCCGTAAAAACGTGCAGTa < 2:1625261/140‑1 (MQ=255) cTGGAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAGTTTGTGATCGTCCGGAACGATAGAACACACTGAGTCTTCAATGGTGCCGTAAAAACGTGCAGTAc < 1:334394/140‑1 (MQ=255) gAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAGTTTGTGATCGTCCGGAACGATAGAACACACTGAGTCTTCAAAGGTGCCGTAAAAACGTg > 1:1358687/1‑131 (MQ=255) gAAATTTTTCGGCGTGGTGGCGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAGTTTGTGATCGTCCGGAACGATAGAACACACTGAGTCTTCAAAGGTGCCGTAAAAACGTg < 2:1358687/131‑1 (MQ=255) | TGAAAATGGTGTAATAATTGCCGCTATTTGCAGAAGAAACGGTACCAGTAAAGGTAGTGGTCATTGTTTCCTGAGTATCAAATACGCAATCTTGCAGGCGAATCTGGAAATTTTTCGGCGTGGTGGTGCCGTTATTTTTCAGTTTTTCGGCACCGATATCACCCATATCAACTTCCAGTTTGTGATCGTCCGGAACGATAGAACACACTGAGTCTTCAATGGTGCCGTAAAAACGTGCAGTACCGTTGTTACCCGCAGCGAT > NC_000913/2455316‑2455577 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |