BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,380,896	G→C	A52P (GCA→CCA)	degQ →	periplasmic serine endoprotease

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,380,896	0	G	C	100.0%	468.3 / NA	119	A52P (GCA→CCA)	degQ	periplasmic serine endoprotease
Reads supporting (aligned to +/- strand): ref base G (0/0); new base C (65/54); total (65/54)

Only 100 of 119 total aligned reads displayed.

GCTGTTGAGTGCATTAGCGTTAAGTGTCGGGTTAACTCTCTCGGCGTCATTTCAGGCCGTCGCGTCGATTCCAGGCCAGGTTGCCGATCAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGGCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTACCGGATCAACCTGCACAACCCTTCGAAGGTTTAGGCTCCGGTGTCATCA  >  NC_000913/3380760‑3381031

gCTGTTGAGTGCATTAGCGTTAAGTGTCGGGTTAACTCTCTCGGCGTCATTTCAGGCCGTCGCGTCGATTCCAGGCCAGGTTGCCGATCAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAg                                                                                                                                      >  2:1053097/1‑140 (MQ=255)

 cTGTTGAGTGCATTAGCGTTAAGTGTCGGGTTAACTCTCTCGGCGTCATTTCAGGCCGTCGCGTCGATTCCAGGCCAGGTTGCCGATCAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAgt                                                                                                                                     <  1:1703024/140‑1 (MQ=255)

  tGTTGAGTGCATTAGCGTTAAGTGTCGGGTTAACTCTCTCGGCGTCATTTCAGGCCGTCGCGTCGATTCCAGGCCAGGTTGCCGATCAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCa                                                                                                                                       >  1:510888/1‑137 (MQ=255)

      gAGTGCATTAGCGTTAAGTGTCGGGTTAACTCTCTCGGCGTCATTTCAGGCCGTCGCGTCGATTCCAGGCCAGGTTGCCGATCAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGa                                                                                                                                <  1:905195/140‑1 (MQ=255)

         tGCATTAGCGTTAAGTGTCGGGTTAACTCTCTCGGCGTCATTTCAGGCCGTCGCGTCGATTCCAGGCCAGGTTGCCGATCAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCg                                                                                                                             <  2:1139804/140‑1 (MQ=255)

           cATTAGCGTTAAGTGTCGGGTTAACTCTCTCGGCGTCATTTCAGGCCGTCGCGTCGATTCCAGGCCAGGTTGCCGATCAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTa                                                                                                                           <  2:1739915/140‑1 (MQ=255)

           cATTAGCGTTAAGTGTCGGGTTAACTCTCTCGGCGTCATTTCAGGCCGTCGCGTCGATTCCAGGCCAGGTTGCCGATCAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTa                                                                                                                           >  2:1181412/1‑140 (MQ=255)

           cATTAGCGTTAAGTGTCGGGTTAACTCTCTCGGCGTCATTTCAGGCCGTCGCGTCGATTCCAGGCCAGGTTGCCGATCAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTa                                                                                                                           <  1:725722/140‑1 (MQ=255)

           cATTAGCGTTAAGTGTCGGGTTAACTCTCTCGGCGTCATTTCAGGCCGTCGCGTCGATTCCAGGCCAGGTTGCCGATCAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTa                                                                                                                           <  2:1407849/140‑1 (MQ=255)

           cATTAGCGTTAAGTGTCGGGTTAACTCTCTCGGCGTCATTTCAGGCCGTCGCGTCGATTCCAGGCCAGGTTGCCGATCAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTa                                                                                                                           >  2:562848/1‑140 (MQ=255)

           cATTAGCGTTAAGTGTCGGGTTAACTCTCTCGGCGTCATTTCAGGCCGTCGCGTCGATTCCAGGCCAGGTTGCCGATCAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTa                                                                                                                           >  1:1407849/1‑140 (MQ=255)

              tAGCGTTAAGTGTCGGGTTAACTCTCTCGGCGTCATTTCAGGCCGTCGCGTCGATTCCAGGCCAGGTTGCCGATCAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACgg                                                                                                                        <  1:1234061/140‑1 (MQ=255)

                 cGTTAAGTGTCGGGTTAACTCTCTCGGCGTCATTTCAGGCCGTCGCGTCGATTCCAGGCCAGGTTGCCGATCAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTg                                                                                                                     >  2:14305/1‑140 (MQ=255)

                 cGTTAAGTGTCGGGTTAACTCTCTCGGCGTCATTTCAGGCCGTCGCGTCGATTCCAGGCCAGGTTGCCGATCAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTg                                                                                                                     <  1:14305/140‑1 (MQ=255)

                      aGTGTCGGGTTAACTCTCTCGGCGTCATTTCAGGCCGTCGCGTCGATTCCAGGCCAGGTTGCCGATCAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTggaagg                                                                                                                <  1:1181412/140‑1 (MQ=255)

                      aGTGTCGGGTTAACTCTCTCGGCGTCATTTCAGGCCGTCGCGTCGATTCCAGGCCAGGTTGCCGATCAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTggaagg                                                                                                                >  2:1211071/1‑140 (MQ=255)

                      aGTGTCGGGTTAACTCTCTCGGCGTCATTTCAGGCCGTCGCGTCGATTCCAGGCCAGGTTGCCGATCAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTggaagg                                                                                                                >  1:1088639/1‑140 (MQ=255)

                       gtgtCGGGTTAACTCTCTCGGCGTCATTTCAGGCCGTCGCGTCGATTCCAGGCCAGGTTGCCGATCAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTggaagga                                                                                                               <  2:1912277/140‑1 (MQ=255)

                          tCGGGTTAACTCTCTCGGCGTCATTTCAGGCCGTCGCGTCGATTCCAGGCCAGGTTGCCGATCAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTggaaggaa                                                                                                              >  1:778979/1‑138 (MQ=255)

                          tCGGGTTAACTCTCTCGGCGTCATTTCAGGCCGTCGCGTCGATTCCAGGCCAGGTTGCCGATCAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACg                                                                                                            >  2:1072875/1‑140 (MQ=255)

                           cGGGTTAACTCTCTCGGCGTCATTTCAGGCCGTCGCGTCGATTCCAGGCCAGGTTGCCGATCAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACgg                                                                                                           >  1:1569090/1‑140 (MQ=255)

                            gggTTAACTCTCTCGGCGTCATTTCAGGCCGTCGCGTCGATTCCAGGCCAGGTTGCCGATCAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGc                                                                                                          <  2:1691109/140‑1 (MQ=255)

                                 aaCTCTCTCGGCGTCATTTCAGGCCGTCGCGTCGATTCCAGGCCAGGTTGCCGATCAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTc                                                                                                     >  2:1358972/1‑140 (MQ=255)

                                 aaCTCTCTCGGCGTCATTTCAGGCCGTCGCGTCGATTCCAGGCCAGGTTGCCGATCAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTc                                                                                                     <  1:1053097/140‑1 (MQ=255)

                                 aaCTCTCTCGGCGTCATTTCAGGCCGTCGCGTCGATTCCAGGCCAGGTTGCCGATCAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTc                                                                                                     <  2:1214822/140‑1 (MQ=255)

                                  aCTCTCTCGGCGTCATTTCAGGCCGTCGCGTCGATTCCAGGCCAGGTTGCCGATCAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCa                                                                                                    >  2:61829/1‑140 (MQ=255)

                                  aCTCTCTCGGCGTCATTTCAGGCCGTCGCGTCGATTCCAGGCCAGGTTGCCGATCAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCa                                                                                                    >  1:542094/1‑140 (MQ=255)

                                   ctctctCGGCGTCATTTCAGGCCGTCGCGTCGATTCCAGGCCAGGTTGCCGATCAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAg                                                                                                   <  2:1378544/140‑1 (MQ=255)

                                        tcGGCGTCATTTCAGGCCGTCGTGTCGATTCCAGGCCAGGTTGCCGATCAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACa                                                                                              >  1:791596/1‑140 (MQ=255)

                                        tcGGCGTCATTTCAGGCCGTCGCGTCGATTCCAGGCCAGGTTGCCGATCAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTggaagga                                                                                                               >  1:1089677/1‑123 (MQ=255)

                                        tcGGCGTCATTTCAGGCCGTCGCGTCGATTCCAGGCCAGGTTGCCGATCAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTggaagga                                                                                                               <  2:1089677/123‑1 (MQ=255)

                                        tcGGCGTCATTTCAGGCCGTCGCGTCGATTCCAGGCCAGGTTGCCGATCAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAggg                                                                                                 >  1:1306020/1‑137 (MQ=255)

                                        tcGGCGTCATTTCAGGCCGTCGCGTCGATTCCAGGCCAGGTTGCCGATCAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACa                                                                                              >  1:879699/1‑140 (MQ=255)

                                             gTCATTTCAGGCCGTCGCGTCGATTCCAGGCCAGGTTGCCGATCAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGaaaa                                                                                         >  2:1000961/1‑140 (MQ=255)

                                             gTCATTTCAGGCCGTCGCGTCGATTCCAGGCCAGGTTGCCGATCAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGaaaa                                                                                         >  1:1749976/1‑140 (MQ=255)

                                             gTCATTTCAGGCCGTCGCGTCGATTCCAGGCCAGGTTGCCGATCAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGCGGAAGGAACGGCCAGTCAGGGACAGaaaa                                                                                         >  2:428746/1‑140 (MQ=255)

                                                           tcgcgtcgATTCCAGGCCAGGTTGCCGATCAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTc                                                                           >  2:785950/1‑140 (MQ=255)

                                                            cgcgtcgATTCCAGGCCAGGTTGCCGATCAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGga                                                                                  <  1:703832/132‑1 (MQ=255)

                                                            cgcgtcgATTCCAGGCCAGGTTGCCGATCAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGga                                                                                  >  2:703832/1‑132 (MQ=255)

                                                            cgcgtcgATTCCAGGCCAGGTTGCCGATCAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCa                                                                          >  2:256705/1‑140 (MQ=255)

                                                                 cgATTCCAGGCCAGGTTGCCGATCAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAg                                                                     <  1:1072875/140‑1 (MQ=255)

                                                                         ggccaggTTGCCGATCAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTgg                                                             >  1:1748387/1‑140 (MQ=255)

                                                                         ggccaggTTGCCGATCAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTgg                                                             >  1:1481196/1‑140 (MQ=255)

                                                                          gccaggTTGCCGATCAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGt                                                            <  1:1893077/140‑1 (MQ=255)

                                                                          gccaggTTGCCGATCAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGt                                                            <  1:1211071/140‑1 (MQ=255)

                                                                          gccaggTTGCCGATCAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGt                                                            <  2:542094/140‑1 (MQ=255)

                                                                          gccaggTTGCCGATCAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGt                                                            <  1:171760/140‑1 (MQ=255)

                                                                           ccaggTTGCCGATCAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGtg                                                           <  1:785950/140‑1 (MQ=255)

                                                                            caggTTGCCGATCAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGtga                                                          >  1:925982/1‑140 (MQ=255)

                                                                              ggTTGCCGATCAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGtgatg                                                        >  1:1237035/1‑140 (MQ=255)

                                                                              ggTTGCCGATCAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGtgatg                                                        <  1:527737/140‑1 (MQ=255)

                                                                               gTTGCCGATCAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGtgatga                                                       >  2:960188/1‑140 (MQ=255)

                                                                               gTTGCCGATCAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGtgatga                                                       >  1:1503419/1‑140 (MQ=255)

                                                                                   ccGATCAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTa                                                   <  2:791596/140‑1 (MQ=255)

                                                                                   ccGATCAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGAGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTa                                                   >  2:1515734/1‑140 (MQ=255)

                                                                                        cAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTACCGGa                                              >  1:1914150/1‑140 (MQ=255)

                                                                                        cAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTACCGGa                                              <  2:1585388/140‑1 (MQ=255)

                                                                                        cAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTACCGGa                                              <  1:1890648/140‑1 (MQ=255)

                                                                                           gCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGAttca                                                   <  2:1764098/132‑3 (MQ=255)

                                                                                           gCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGAttca                                                   >  1:1764098/1‑130 (MQ=255)

                                                                                             cccTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTACCGGATCAAc                                         <  1:155321/140‑1 (MQ=255)

                                                                                                tctcCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTACCGGATCa                                           <  2:1375218/135‑1 (MQ=255)

                                                                                                tctcCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTACCGGATCa                                           >  1:1375218/1‑135 (MQ=255)

                                                                                                tctcCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTACCGGATCAACCTg                                      >  2:76320/1‑140 (MQ=255)

                                                                                                     ccAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTACCGGATCAACCTGCACaa                                 >  2:1900095/1‑140 (MQ=255)

                                                                                                     ccAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTACCGGATCAACCTGCACaa                                 <  2:1748387/140‑1 (MQ=255)

                                                                                                         tCTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTACCGGATCAACCTGCACAACCCt                             >  2:593589/1‑140 (MQ=255)

                                                                                                          cTGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTACCGGATCAACCTGCACAACCCtt                            >  1:1539240/1‑140 (MQ=255)

                                                                                                           tGGCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTACCGGATCAACCTGCACAACCCTTc                           >  1:945629/1‑140 (MQ=255)

                                                                                                            ggCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTACCGGATCAACCTGCACAACCCTTCg                          >  2:1087751/1‑140 (MQ=255)

                                                                                                            ggCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTACCGGATCAACCTGCACAACCCTTCg                          >  1:459420/1‑140 (MQ=255)

                                                                                                            ggCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTACCGGATCAACCTGCACAACCCTTCg                          <  1:960188/140‑1 (MQ=255)

                                                                                                            ggCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTACCGGATCAACCTGCACAACCCTTCg                          >  2:1872673/1‑140 (MQ=255)

                                                                                                             gCTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTACCGGATCAACCTGCACAACCCTTCGa                         <  1:540144/140‑1 (MQ=255)

                                                                                                              cTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGTAAGAATTCAAAAAGTTTTTTGGTGATGATTTACCGGATCAACCTGCACAAc                                >  1:757809/1‑132 (MQ=255)

                                                                                                              cTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGTAAGAATTCAAAAAGTTTTTTGGTGATGATTTACCGGATCAACCTGCACAAc                                <  2:757809/132‑1 (MQ=255)

                                                                                                              cTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTACCGGATCAAc                                         >  1:197553/1‑123 (MQ=255)

                                                                                                              cTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTACCGGATCAAc                                         <  2:197553/123‑1 (MQ=255)

                                                                                                              cTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTACCGGATCAACCTGCACaa                                 <  2:894914/131‑1 (MQ=255)

                                                                                                              cTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTACCGGATCAACCTGCACaa                                 >  1:894914/1‑131 (MQ=255)

                                                                                                              cTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTACCGGATCAACCTGCACAACCCTTCGaa                        >  2:728588/1‑140 (MQ=255)

                                                                                                              cTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTACCGGATCAACCTGCACAACCCTTCGaa                        <  1:728588/140‑1 (MQ=255)

                                                                                                              cTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTACCGGATCAACCTGCACAACCCTTCGaa                        >  1:1045243/1‑140 (MQ=255)

                                                                                                              cTCCAATGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTACCGGATCAACCTGCACAACCCTTCGaa                        >  1:1598319/1‑140 (MQ=255)

                                                                                                                  aaTGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTACCGGATCAACCTGCACAACCCTTCGAAGGtt                    >  1:1238155/1‑140 (MQ=255)

                                                                                                                    tGCTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTACCGGATCAACCTGCACAACCCTTCGAAGGTTTa                  <  2:1237035/140‑1 (MQ=255)

                                                                                                                      cTGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTACCGGATCAACCTGCACAACCCTTCGAAGGTTTAgg                <  2:1914150/140‑1 (MQ=255)

                                                                                                                       tGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTACCGGATCAACCTGCACAACCCTTCGAAGGTTTAGGc               >  1:571285/1‑140 (MQ=255)

                                                                                                                       tGGAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTACCGGATCAACCTGCACAACCCTTCGAAGGTTTAGGc               <  2:1605854/140‑1 (MQ=255)

                                                                                                                        ggAAAAAGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTACCGGATCAACCTGCACAACCCTTCGAAGGTTTAGGCt              >  1:229689/1‑140 (MQ=255)

                                                                                                                           aaaaGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTACCGGATCAACCTGCACAACCCTTCGAAGGTTTAGGCTCCg           <  2:742360/140‑1 (MQ=255)

                                                                                                                           aaaaGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTACCGGATCAACCTGCACAACCCTTCGAAGGTTTAGGCTCCg           <  1:590226/140‑1 (MQ=255)

                                                                                                                           aaaaGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTACCGGATCAACCTGCACAACCCTTCGAAGGTTTAGGCTCCg           <  1:593589/140‑1 (MQ=255)

                                                                                                                             aaGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTACCGGATCAACCTGCACAACCCTTCGAAGGTTTAGGCTCCGgt         <  2:1497351/140‑1 (MQ=255)

                                                                                                                             aaGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTACCGGATCAACCTGCACAACCCTTCGAAGGTTTAGGCTCCGgt         <  2:1539240/140‑1 (MQ=255)

                                                                                                                              aGTGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTACCGGATCAACCTGCACAACCCTTCGAAGGTTTAGGCTCCGgtg        >  2:233358/1‑140 (MQ=255)

                                                                                                                                tGCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTACCGGATCAACCTGCACAACCCTTCGAAGGTTTAGGCTCCGGTGtc      <  2:1265768/140‑1 (MQ=255)

                                                                                                                                 gCTTCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTACCGGATCAACCTGCACAACCCTTCGAAGGTTTAGGCTCCGGTGtca     >  1:1019204/1‑140 (MQ=255)

                                                                                                                                   ttCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTACCGGATCAACCTGCACAACCCTTCGAAGGTTTAGGCTCCGGTGtcatc   >  1:154036/1‑140 (MQ=255)

                                                                                                                                    tCCGCCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTACCGGATCAACCTGCACAACCCTTCGAAGGTTTAGGCTCCGGTGtcatca  >  2:803334/1‑140 (MQ=255)

GCTGTTGAGTGCATTAGCGTTAAGTGTCGGGTTAACTCTCTCGGCGTCATTTCAGGCCGTCGCGTCGATTCCAGGCCAGGTTGCCGATCAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGGCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTACCGGATCAACCTGCACAACCCTTCGAAGGTTTAGGCTCCGGTGTCATCA  >  NC_000913/3380760‑3381031

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`