Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,444,829	A→T	I134N (ATC→AAC)	rpsE ←	30S ribosomal subunit protein S5

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,444,829	0	A	T	100.0%	315.7 / NA	88	I134N (ATC→AAC)	rpsE	30S ribosomal subunit protein S5
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base T (49/39);  total (49/39)

GGTTTGAGTAATTTTAATAGTCTTTGCCATGGTTTATTTCCCCAGAATTTCTTCAACGGATTTACCACGCTTGGCAGCGACCATTTCTGGAGAATTCATATTTTCCAGGCCATCAATAGTTGCACGAACCACGTTGATCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACGGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACC  >  NC_000913/3444693‑3444959                                                                                                                                         |                                                                                                                                   ggTTTGAGTAATTTTAATAGTCTTTGCCATGGTTTATTTCCCCAGAATTTCTTCAACGGATTTACCACGCTTGGCAGCGACCATTTCTGGAGAATTCATATTTTCCAGGCCATCAATAGTTGCACGAACCACGTTGTTCg                                                                                                                                 >  2:432739/1‑140 (MQ=255)   tttGAGTAATTTTAATAGTCTTTGCCATGGTTTATTTCCCCAGAATTTCTTCAACGGATTTACCACGCTTGGCAGCGACCATTTCTGGAGAATTCATATTTTCCAGGCCATCAATAGTTGCACGAACCACGTTGTTCggg                                                                                                                               <  1:396299/140‑1 (MQ=255)   tttGAGTAATTTTAAAAGTCTTTGCCATGGTTTATTTCCCCAGAATTTCTTCAACGGATTTACCACGCTTGGCAGCGACCATTTCTGGAGAATTCATATTTTCCAGGCCATCAATAGTTGCACGAACCACGTTGTTCggg                                                                                                                               <  2:1487541/140‑1 (MQ=255)    ttGAGTAATTTTAATAGTCTTTGCCATGGTTTATTTCCCCAGAATTTCTTCAACGGATTTACCACGCTTGGCAGCGACCATTTCTGGAGAATTCATATTTTCCAGGCCATCAATAGTTGCACGAACCACGTTGTTCGGGt                                                                                                                              >  2:582188/1‑140 (MQ=255)          aaTTTTAATAGTCTTTGCCATGGTTTATTTCCCCAGAATTTCTTCAACGGATTTACCACGCTTGGCAGCGACCATTTCTGGAGAATTCATATTTTCCAGGCCATCAATAGTTGCACGAACCACGTTGTTCGGGTtggtgg                                                                                                                        <  2:382692/140‑1 (MQ=255)            ttttAATAGTCTTTGCCATGGTTTATTTCCCCAGAATTTCTTCAACGGATTTACCACGCTTGGCAGCGACCATTTCTGGAGAATTCATATTTTCCAGGCCATCAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGaa                                                                                                                      >  1:1214365/1‑140 (MQ=255)                aaTAGTCTTTGCCATGGTTTATTTCCCCAGAATTTCTTCAACGGATTTACCACGCTTGGCAGCGACCATTTCTGGAGAATTCATATTTTCCAGGCCATCAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCAt                                                                                                                  <  2:513119/140‑1 (MQ=255)                  tAGTCTTTGCCATGGTTTATTTCCCCAGAATTTCTTCAACGGATTTACCACGCTTGGCAGCGACCATTTCTGGAGAATTCATATTTTCCAGGCCATCAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAg                                                                                                                <  2:720655/140‑1 (MQ=255)                  tAGTCTTTGCCATGGTTTATTTCCCCAGAATTTCTTCAACGGATTTACCACGCTTGGCAGCGACCATTTCTGGAGAATTCATATTTTCCAGGCCATCAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAg                                                                                                                >  2:1115005/1‑140 (MQ=255)                     tCTTTGCCATGGTTTATTTCCCCAGAATTTCTTCAACGGATTTACCACGCTTGGCAGCGACCATTTCTGGAGAATTCATATTTTCCAGGCCATCAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCt                                                                                                             <  2:1497684/140‑1 (MQ=255)                     tCTTTGCCATGGTTTATTTCCCCAGAATTTCTTCAACGGATTTACCACGCTTGGCAGCGACCATTTCTGGAGAATTCATATTTTCCAGGCCATCAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCt                                                                                                             <  2:1103912/140‑1 (MQ=255)                       tttGCCATGGTTTATTTCCCCAGAATTTCTTCAACGGATTTACCACGCTTGGCAGCGACCATTTCTGGAGAATTCATATTTTCCAGGCCATCAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCttt                                                                                                           >  1:298833/1‑140 (MQ=255)                       tttGCCATGGTTTATTTCCCCAGAATTTCTTCAACGGATTTACCACGCTTGGCAGCGACCATTTCTGGAGAATTCATATTTTCCAGGCCATCAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCtt                                                                                                            <  2:1306152/139‑1 (MQ=255)                       tttGCCATGGTTTATTTCCCCAGAATTTCTTCAACGGATTTACCACGCTTGGCAGCGACCATTTCTGGAGAATTCATATTTTCCAGGCCATCAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCtt                                                                                                            >  1:1306152/1‑139 (MQ=255)                       tttGCCATGGTTTATTTCCCCAGAATTTCTTCAACGGATTTACCACGCTTGGCAGCGACCATTTCTGGAGAATTCATATTTTCCAGGCCATCAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCt                                                                                                             <  2:577424/138‑1 (MQ=255)                       tttGCCATGGTTTATTTCCCCAGAATTTCTTCAACGGATTTACCACGCTTGGCAGCGACCATTTCTGGAGAATTCATATTTTCCAGGCCATCAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCt                                                                                                             >  1:577424/1‑138 (MQ=255)                            cATGGTTTATTTCCCCAGAATTTCTTCAACGGATTTACCACGCTTGGCAGCGACCATTTCTGGAGAATTCATATTTTCCAGGCCATCAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCa                                                                                                      <  2:878855/140‑1 (MQ=255)                                gTTTATTTCCCCAGAATTTCTTCAACGGATTTACCACGCTTGGCAGCGACCATTTCTGGAGAATTCATATTTTCCAGGCCATCAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAAc                                                                                                  >  1:795699/1‑140 (MQ=255)                                   tATTTCCCCAGAATTTCTTCAACGGATTTACCACGCTTGGCAGCGACCATTTCTGGAGAATTCATATTTTCCAGGCCATCAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGtt                                                                                               >  1:1282125/1‑140 (MQ=255)                                     tttCCCCAGAATTTCTTCAACGGATTTACCACGCTTGGCAGCGACCATTTCTGGAGAATTCATATTTTCCAGGCCATCAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTAt                                                                                             >  1:249688/1‑140 (MQ=255)                                         cccAGAATTTCTTCAACGGATTTACCACGCTTGGCAGCGACCATTTCTGGAGAATTCATATTTTCCAGGCCATCAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAAc                                                                                         <  2:1044871/140‑1 (MQ=255)                                         cccAGAATTTCTTCAACGGATTTACCACGCTTGGCAGCGACCATTTCTGGAGAATTCATATTTTCCAGGCCATCAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAAc                                                                                         >  1:768805/1‑140 (MQ=255)                                          ccAGAATTTCTTCAACGGATTTACCACGCTTGGCAGCGACCATTTCTGGAGAATTCATATTTTCCAGGCCATCAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAAcc                                                                                        >  2:657428/1‑140 (MQ=255)                                           cAGAATTTCTTCAACGGATTTACCACGCTTGGCAGCGACCATTTCTGGAGAATTCATATTTTCCAGGCCATCAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAAccc                                                                                       >  2:689425/1‑140 (MQ=255)                                           cAGAATTTCTTCAACGGATTTACCACACTTGGCAGCGACCATTTCTGGAGAATTCATATTTTCCAGGCCATCAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAAccc                                                                                       >  1:402284/1‑140 (MQ=255)                                              aaTTTCTTCAACGGATTTACCACGCTTGGCAGCGACCATTTCTGGAGAATTCATATTTTCCAGGCCATCAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAg                                                                                    >  2:746517/1‑140 (MQ=255)                                                   cttcAACGGATTTACCACGCTTGGCAGCGACCATTTCTGGAGAATTCATATTTTCCAGGCCATCAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACt                                                                               >  2:1511226/1‑140 (MQ=255)                                                   cttcAACGGATTTACCACGCTTGGCAGCGACCATTTCTGGAGAATTCATATTTTCCAGGCCATCAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACt                                                                               >  2:585246/1‑140 (MQ=255)                                                        aCGGATTTACCACGCTTGGCAGCGACCATTTCTGGAGAATTCATATTTTCCAGGCCATCAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAg                                                                          >  1:1282601/1‑140 (MQ=255)                                                            aTTTACCACGCTTGGCAGCGACCATTTCTGGAGAATTCATATTTTCCAGGCCATCAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACg                                                                      <  2:1000994/140‑1 (MQ=255)                                                              ttACCACGCTTGGCAGCGACCATTTCTGGAGAATTCATATTTTCCAGGCCATCAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACGgc                                                                    <  1:585246/140‑1 (MQ=255)                                                                 ccACGCTTGGCAGCGACCATTTCTGGAGAATTCATATTTTCCAGGCCATCAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACGgcgcg                                                                 <  2:249688/140‑1 (MQ=255)                                                                  cACGCTTGGCAGCGACCATTTCTGGAGAATTCATATTTTCCAGGCCATCAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACGgcgcgc                                                                <  1:103866/140‑1 (MQ=255)                                                                    cacTTGGCAGCGACCATTTCTGGAGAATTCATATTTTCCAGGCCATCAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACGGCGCGCAt                                                              <  2:402284/138‑1 (MQ=255)                                                                      cTTGGCAGCGACCATTTCTGGAGAATTCATATTTTCCAGGCCATCAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACGGCGCGCATTg                                                            >  2:1230772/1‑140 (MQ=255)                                                                      cTTGGCAGCGACCATTTCTGGAGAATTCATATTTTCCAGGCCATCAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACGGCGCGCATTg                                                            >  1:1206788/1‑140 (MQ=255)                                                                      cTTGGCAGCGACCATTTCTGGAGAATTCATATTTTCCAGGCCATCAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACGGCGCGCATTg                                                            >  2:1226147/1‑140 (MQ=255)                                                                      cTTGGCAGCGACCATTTCTGGAGAATTCATATTTTCCAGGCCATCAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACGGCGCGCATTg                                                            >  1:1527602/1‑140 (MQ=255)                                                                      cTTGGCAGCGACCATTTCTGGAGAATTCATATTTTCCAGGCCATCAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACGGCGCGCATTg                                                            >  1:260168/1‑140 (MQ=255)                                                                      cTTGGCAGCGACCATTTCTGGAGAATTCATATTTTCCAGGCCATCAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACGGCGCGCATTg                                                            >  2:390948/1‑140 (MQ=255)                                                                      cTTGGCAGCGACCATTTCTGGAGAATTCATATTTTCCAGGCCATCAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACGGCGCGCATTg                                                            <  1:390948/140‑1 (MQ=255)                                                                        tGGCAGCGACCATTTCTGGAGAATTCATATTTTCCAGGCCATCAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACGGCGCGCATTGca                                                          <  2:1206788/140‑1 (MQ=255)                                                                         ggCAGCGACCATTTCTGGAGAATTCATATTTTCCAGGCCATCAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACGGCGCGCATTGcac                                                         >  2:810543/1‑140 (MQ=255)                                                                               gACCATTTCTGGAGAATTCATATTTTCCAGGCCATCAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACGGCGCGCATTGCACCACCgg                                                   >  2:592176/1‑140 (MQ=255)                                                                                aCCATTTCTGGAGAATTCATATTTTCCAGGCCATCAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACGGCGCGCATTGCACCACCGGc                                                  >  2:767648/1‑140 (MQ=255)                                                                                  cATTTCTGGAGAATTCATATTTTCCAGGCCATCAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACGGCGCGCATTGCACCACCGGCga                                                <  1:657428/140‑1 (MQ=255)                                                                                   aTTTCTGGAGAATTCATATTTTCCAGGCCATCAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACGGCGCGCATTGCACCACCGGCgat                                               <  1:1230772/140‑1 (MQ=255)                                                                                           agaATTCATATTTTCCAGGCCATCAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACGGCGCGCATTGCACCACCGGCGATGATACCgg                                       >  2:1313234/1‑140 (MQ=255)                                                                                              aTTCATATTTTCCAGGCCATCAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACGGCGCGCATTGCACCACCGGCGATGATACCGGTAc                                    <  2:1527602/140‑1 (MQ=255)                                                                                              aTTCATATTTTCCAGGCCATCAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACGGCGCGCATTGCACCACCGGCGATGATACCGGTAc                                    >  2:376375/1‑140 (MQ=255)                                                                                               ttCATATTTTCCAGGCCATCAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACGGCGCGCATTGCACCACCGGCGATGATACCgg                                       <  1:1300209/136‑1 (MQ=255)                                                                                               ttCATATTTTCCAGGCCATCAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACGGCGCGCATTGCACCACCGGCGATGATACCgg                                       >  2:1300209/1‑136 (MQ=255)                                                                                                 cATATTTTCCAGGCCATCAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACGGCGCGCATTGCACCACCGGCGATGATACCGGTACCtt                                 >  1:820428/1‑140 (MQ=255)                                                                                                    atTTTCCAGGCCATCAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACGGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCgg                              <  1:1226147/140‑1 (MQ=255)                                                                                                         ccAGGCCATCAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACGGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGcc                         <  2:1469959/140‑1 (MQ=255)                                                                                                         ccAGGCCATCAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACGGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGcc                         <  2:1282601/140‑1 (MQ=255)                                                                                                         ccAGGCCATCAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACGGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGcc                         <  1:1115005/140‑1 (MQ=255)                                                                                                            ggCCATCAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACGGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGc                      >  1:501035/1‑140 (MQ=255)                                                                                                            ggCCATCAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACGGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGc                      >  2:1199497/1‑140 (MQ=255)                                                                                                             gCCATCAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACGGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCt                     >  2:413867/1‑140 (MQ=255)                                                                                                                aTCAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAGCCCCAGCGACTTCCAGAACGGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCa                  <  1:413867/140‑1 (MQ=255)                                                                                                                 tCAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACGGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCAt                 >  1:742203/1‑140 (MQ=255)                                                                                                                 tCAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACGGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCAt                 <  1:592176/140‑1 (MQ=255)                                                                                                                  cAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACGGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGaa                            >  2:1202175/1‑128 (MQ=255)                                                                                                                  cAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACGGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGaa                            <  1:1202175/128‑1 (MQ=255)                                                                                                                  cAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACGGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATg                >  2:122317/1‑140 (MQ=255)                                                                                                                  cAATAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACGGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATg                >  1:1172116/1‑140 (MQ=255)                                                                                                                    aTAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACGGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGaa              <  1:1313234/140‑1 (MQ=255)                                                                                                                    aTAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACGGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGaa              <  2:260168/140‑1 (MQ=255)                                                                                                                     tAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACGGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAAt             <  2:1195424/140‑1 (MQ=255)                                                                                                                     tAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACGGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAAt             <  2:810005/140‑1 (MQ=255)                                                                                                                     tAGTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTACCAGAACGGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAAt             <  1:1733/140‑1 (MQ=255)                                                                                                                       gTTGCACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACGGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATAc           >  1:1182632/1‑140 (MQ=255)                                                                                                                           cACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACGGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCgg                       <  2:995253/124‑1 (MQ=255)                                                                                                                           cACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACGGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCgg                       <  2:1103929/124‑1 (MQ=255)                                                                                                                           cACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACGGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCgg                       >  1:995253/1‑124 (MQ=255)                                                                                                                           cACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACGGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCgg                       >  1:1103929/1‑124 (MQ=255)                                                                                                                           cACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACGGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCAt                 <  2:51161/130‑1 (MQ=255)                                                                                                                           cACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACGGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCAt                 >  1:51161/1‑130 (MQ=255)                                                                                                                           cACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACGGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCga       >  2:1235584/1‑140 (MQ=255)                                                                                                                           cACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACGGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCga       <  2:1214365/140‑1 (MQ=255)                                                                                                                           cACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACGGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCga       >  1:915263/1‑140 (MQ=255)                                                                                                                           cACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACGGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCga       >  2:733613/1‑140 (MQ=255)                                                                                                                           cACGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACGGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCga       >  1:901087/1‑140 (MQ=255)                                                                                                                             cGAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACGGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCgaga     >  2:1388707/1‑140 (MQ=255)                                                                                                                              gAACCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACGGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGaa    <  1:376375/140‑1 (MQ=255)                                                                                                                               aaCCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACGGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAAc   >  1:1376772/1‑140 (MQ=255)                                                                                                                               aaCCACGTTGTTCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACGGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAAc   >  1:1271567/1‑140 (MQ=255)                                                                                                                                aCCACGTTGTTCGGGTTGGTGTAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACGGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAAcc  >  2:746190/1‑140 (MQ=255)                                                                                                                                         |                                                                                                                                   GGTTTGAGTAATTTTAATAGTCTTTGCCATGGTTTATTTCCCCAGAATTTCTTCAACGGATTTACCACGCTTGGCAGCGACCATTTCTGGAGAATTCATATTTTCCAGGCCATCAATAGTTGCACGAACCACGTTGATCGGGTTGGTGGAACCATAGGCTTTAGCCAGAACGTTATGAACCCCAGCGACTTCCAGAACGGCGCGCATTGCACCACCGGCGATGATACCGGTACCTTCGGAAGCCGGCTGCATGAATACGCGAGAACC  >  NC_000913/3444693‑3444959

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑