| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 276363 | 125 (1.170) | 3 (0.030) | 3/268 | 9.6 | 2.5% | coding (1039/1404 nt) | mmuP | S‑methyl‑L‑methionine transporter |
| ? | NC_000913 | 276367 = | 113 (1.090) | coding (1043/1404 nt) | mmuP | S‑methyl‑L‑methionine transporter | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TTTCTGCAGCGAACTCCGGGTTATATGCCTCCGGGCGCATGCTGTGGTCGTTGTCGAATGAACGTACGCTACCGGCCTGTTTTGCGCGAGTAACGAAAAACGGCGTGCCACTGACGGCGCTGTCGGTCAGTATGCTCGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/276223‑276363‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgTGCTGGCGCTGTTTTCCAGCGTGGTGGCCCCGGACACGGTATTTGTTGCGCTGTCGGCAATCTCCGGGTTTGCGGTGGTAGCGGTGTGGCTGAGTATCTGCGCCTCGCATTTTGTTTTTCGTCGCCGTCATCTGCAACA > NC_000913/276367‑276505 TTTCTGCAGCGAACTCCGGGTTATATGCCTCCGGGCGCATGCTGTGGTCGTTGTCGAATGAACGTACGCTACCGGCCTGTTTTGCGCGAGTAACGAAAAACGGCGTGCCACTGACGGCGCTGTCGGTCAGTATGCTCGGT < 2:253771/140‑1TTTCTGCAGCGAACTCCGGGTTATATGCCTCCGGGCGCATGCTGTGGTCGTTGTCGAATGAACGTACGCTACCGGCCTGTTTTGCGCGAGTAACGAAAAACGGCGTGCCACTGACGGCGCTGTCGGTCAGTATGCTCGGT > 1:1300892/1‑140TTTCTGCAGCGAACTCCGGGTTATATGCCTCCGGGCGCATGCTGTGGTCGTTGTCGAATGAACGTACGCTACCGGCCTGTTTTGCGCGAGTAACGAAAAACGGCGTGCCACTGACGGCGCTGTCGGTCAGTATGCTCGGT > 2:852153/1‑140 TTGTCGAATGAACGTACGCTACCGGCCTGTTTTGCGCGAGTAACGAAAAACGGCGTGCCACTGACGGCGCTGTCGGTCAGTATGCTCGGTGTGCTGGCGCTGTTTTCCAGCGTGGTGGCCCCGGACACGGTATTTGTTGC > 1:1230882/1‑140 GCCTGTTTTGCGCGAGTAACGAAAAACGGCGTGCCACTGACGGCGCTGTCGGTCAGTATGCTCGGTGTGCTGGCGCTGTTTTCCAGCGTGGTGGCCCCGGACACGGTATTTGTTGCGCTGTCGGCAATCTCCGGGTTTGC < 2:1230882/140‑1 TTGCGCGAGTAACGAAAAACGGCGTGCCACTGACGGCGCTGTCGGTCAGTATGCTCGGTGTGCTGGCGCTGTTTTCCAGCGTGGTGGCCCCGGACACGGTATTTGTTGCGCTGTCGGCAATCTCCGGGTTTGCGGTGGTA > 2:408194/1‑140 GGTGTGCTGGCGCTGTTTTCCAGCGTGGTGGCCCCGGACACGGTATTTGTTGCGCTGTCGGCAATCTCCGGGTTTGCGGTGGTAGCGGTGTGGCTGAGTATCTGCGCCTCGCATTTTGTTTTTCGTCGCCGTCATCTGCA > 1:1766117/1‑140 GGTGTGCTGGCGCTGTTTTCCAGCGTGGTGGCCCCGGACACGGTATTTGTTGCGCTGTCGGCAATCTCCGGGTTTGCGGTGGTAGCGGTGTGGCTGAGTATCTGCGCCTCGCATTTTGTTTTTCGTCGCCGTCATCTGCA > 2:1711063/1‑140 GGTGTGCTGGCGCTGTTTTCCAGCGTGGTGGCCCCGGACACGGTATTTGTTGCGCTGTCGGCAATCTCCGGGTTTGCGGTGGTAGCGGTGTGGCTGAGTATCTGCGCCTCGCATTTTGTTTTTCGTCGCCGTCATCTGCA > 2:1383768/1‑140 GGTGTGCTGGCGCTGTTTTCCAGCGTGGTGGCCCCGGACACGGTATTTGTTGCGCTGTCGGCAATCTCCGGGTTTGCGGTGGTAGCGGTGTGGCTGAGTATCTGCGCCTCGCATTTTGTTTTTCGTCGCCGTCATCTGCA > 2:1008566/1‑140 GGTGTGCTGGCGCTGTTTTCCAGCGTGGTGGCCCCGGACACGGTATTTGTTGCGCTGTCGGCAATCTCCGGGTTTGCGGTGGTAGCGGTGTGGCTGAGTATCTGCGCCTCGCATTTTGTTTTTCGTCGCCGTCATCTGCA > 2:535592/1‑140 GGTGTGCTGGCGCTGTTTTCCAGCGTGGTGGCCCCGGACACGGTATTTGTTGCGCTGTCGGCAATCTCCGGGTTTGCGGTGGTAGCGGTGTGGCTGAGTATCTGCGCCTCGCATTTTGTTTTTCGTCGCCGTCATCTGCA > 1:1551339/1‑140 GGTGTGCTGGCGCTGTTTTCCAGCGTGGTGGCCCCGGACACGGTATTTGTTGCGCTGTCGGCAATCTCCGGGTTTGCGGTGGTAGCGGTGTGGCTGAGTATCTGCGCCTCGCATTTTGTTTTTCGTCGCCGTCATCTGCA > 1:1464472/1‑140 GGTGTGCTGGCGCTGTTTTCCAGCGTGGTGGCCCCGGACACGGTATTTGTTGCGCTGTCGGCAATCTCCGGGTTTGCGGTGGTAGCGGTGTGGCTGAGTATCTGCGCCTCGCATTTTGTTTTTCGTCGCCGTCATCTGCA > 1:1310312/1‑140 GGTGTGCTGGCGCTGTTTTCCAGCGTGGTGGCCCCGGACACGGTATTTGTTGCGCTGTCGGCAATCTCCGGGTTTGCGGTGGTAGCGGTGTGGCTGAGTATCTGCGCCTCGCATTTTGTTTTTCGTCGCCGTCATCTGCA > 1:1114506/1‑140 GTGTGCTGGCGCTGTTTTCCAGCGTGGTGGCCCCGGACACGGTATTTGTTGCGCTGTCGGCAATCTCCGGGTTTGCGGTGGTAGCGGTGTGGCTGAGTATCTGCGCCTCGCATTTTGTTTTTCGTCGCCGTCATCTGCAA < 1:607053/140‑1 GTGTGCTGGCGCTGTTTTCCAGCGTGGTGGCCCCGGACACGGTATTTGTTGCGCTGTCGGCAATCTCCGGGTTTGCGGTGGTAGCGGTGTGGCTGAGTATCTGCGCCTCGCATTTTGTTTTTCGTCGCCGTCATCTGCAA < 1:1692555/140‑1 TGTGCTGGCGCTGTTTTCCAGCGTGGTGGCCCCGGACACGGTATTTGTTGCGCTGTCGGCAATCTCCGGGTTTGCGGTGGTAGCGGTGTGGCTGAGTATCTGCGCCTCGCATTTTGTTTTTCGTCGCCGTCATCTGCAAC > 2:931994/1‑140 TGTGCTGGCGCTGTTTTCCAGCGTGGTGGCCCCGGACACGGTATTTGTTGCGCTGTCGGCAATCTCCGGGTTTGCGGTGGTAGCGGTGTGGCTGAGTATCTGCGCCTCGCATTTTGTTTTTCGTCGCCGTCATCTGCAAC > 1:1378956/1‑140 GTGCTGGCGCTGTTTTCCAGCGTGGTGGCCCCGGACACGGTATTTGTTGCGCTGTCGGCAATCTCCGGGTTTGCGGTGGTAGTGGTGTGGCTGAGTATCTGCGCCTCGCATTTTGTTTTTCGTCGCCGTCATCTGCAACA < 2:531825/140‑1 GTGCTGGCGCTGTTTTCCAGCGTGGTGGCCCCGGACACGGTATTTGTTGCGCTGTCGGCAATCTCCGGGTTTGCGGTGGTAGCGGTGTGGCTGAGTATCTGCGCCTCGCATTTTGTTTTTCGTCGCCGTCATCTGCAACA < 2:1558684/140‑1 GTGCTGGCGCTGTTTTCCAGCGTGGTGGCCCCGGACACGGTATTTGTTGCGCTGTCGGCAATCTCCGGGTTTGCGGTGGTAGCGGTGTGGCTGAGTATCTGCGCCTCGCATTTTGTTTTTCGTCGCCGTCATCTGCAACA < 1:29192/140‑1 GTGCTGGCGCTGTTTTCCAGCGTGGTGGCCCCGGACACGGTATTTGTTGCGCTGTCGGCAATCTCCGGGTTTGCGGTGGTAGCGGTGTGGCTGAGTATCTGCGCCTCGCATTTTGTTTTTCGTCGCCGTCATCTGCAACA < 1:115063/140‑1 TTTCTGCAGCGAACTCCGGGTTATATGCCTCCGGGCGCATGCTGTGGTCGTTGTCGAATGAACGTACGCTACCGGCCTGTTTTGCGCGAGTAACGAAAAACGGCGTGCCACTGACGGCGCTGTCGGTCAGTATGCTCGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/276223‑276363‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgTGCTGGCGCTGTTTTCCAGCGTGGTGGCCCCGGACACGGTATTTGTTGCGCTGTCGGCAATCTCCGGGTTTGCGGTGGTAGCGGTGTGGCTGAGTATCTGCGCCTCGCATTTTGTTTTTCGTCGCCGTCATCTGCAACA > NC_000913/276367‑276505 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |