BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,129,985	T→G	K77N (AAA→AAC)	yghO ←	putative DNA‑binding transcriptional regulator YghO

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,129,985	0	T	G	100.0%	461.9 / NA	117	K77N (AAA→AAC)	yghO	putative DNA‑binding transcriptional regulator YghO
Reads supporting (aligned to +/- strand): ref base T (0/0); new base G (57/60); total (57/60)

Only 100 of 121 total aligned reads displayed.

GCGCCAAACAACGCGGCAAAAACCTGCGGATCATCAATGGCGTCAATCATGCCGAAATGACCGGTATCTTTGCCGTAACGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCTTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGGAAAAGCGATAA  >  NC_000913/3129851‑3130121

gcgcCAAACAACGCGGCAAAAACCTGCGGATCATCAATGGCGTCAATCATGCCGAAATGACCGGTATCTTTGCCGTAACGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCgttttt                                                                                                                                     <  1:701913/140‑1 (MQ=255)

 cgcCAAACAACGCGGCAAAAACCTGCGGATCATCAATGGCGTCAATCATGCCGAAATGACCGGTATCTTTGCCGTAACGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCgtttttt                                                                                                                                    >  2:1108419/1‑140 (MQ=255)

  gcCAAACAACGCGGCAAAAACCTGCGGATCATCAATGGCGTCAATCATGCCGAAATGACCGGTATCTTTGCCGTAACGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTg                                                                                                                                   <  2:927964/140‑1 (MQ=255)

  gcCAAACAACGCGGCAAAAACCTGCGGATCATCAATGGCGTCAATCATGCCGAAATGACCGGTATCTTTGCCGTAACGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTg                                                                                                                                   <  2:775266/140‑1 (MQ=255)

  gcCAAACAACGCGGCAAAAACCTGCGGATCATCAATGGCGTCAATCATGCCGAAATGACCGGTATCTTTGCCGTAACGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTg                                                                                                                                   <  1:1249245/140‑1 (MQ=255)

  gcCAAACAACGCGGCAAAAACCTGCGGATCATCAATGGCGTCAATCATGCCGAAATGACCGGTATCTTTGCCGTAACGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTg                                                                                                                                   <  2:1526478/140‑1 (MQ=255)

  gcCAAACAACGCGGCAAAAACCTGCGGATCATCAATGGCGTCAATCATGCCGAAATGACCGGTATCTTTGCCGTAACGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTg                                                                                                                                   >  2:1249245/1‑140 (MQ=255)

  gcCAAACAACGCGGCAAAAACCTGCGGATCATCAATGGCGTCAATCATGCCGAAATGACCGGTATCTTTGCCGTAACGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTg                                                                                                                                   <  1:15541/140‑1 (MQ=255)

  gcCAAACAACGCGGCAAAAACCTGCGGATCATCAATGGCGTCAATCATACCGAAATGACCGGTATCTTTGCCGTAACGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTg                                                                                                                                   <  1:1573385/140‑1 (MQ=255)

      aacaacGCGGCAAAAACCTGCGGATCATCAATGGCGTCAATCATGCCGAAATGACCGGTATCTTTGCCGTAACGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGccac                                                                                                                               <  1:1691927/140‑1 (MQ=255)

         aacGCGGCAAAAACCTGCGGATCATCAATGGCGTCAATCATGCCGAAATGACCGGTATCTTTGCCGTAACGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGccaccca                                                                                                                            <  2:1081573/140‑1 (MQ=255)

          acGCGGCAAAAACCTGCGGATCATCAATGGCGTCAATCATGCCGAAATGACCGGTATCTTTGCCGTAACGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGccacccac                                                                                                                           <  1:1589856/140‑1 (MQ=255)

           cgcgGCAAAAACCTGCGGATCATCAATGGCGTCAATCATGCCGAAATGACCGGTATCTTTGCCGTAACGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACg                                                                                                                          >  1:733208/1‑140 (MQ=255)

           cgcgGCAAAAACCTGCGGATCATCAATGGCGTCAATCATGCCGAAATGACCGGTATCTTTGCCGTAACGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACg                                                                                                                          >  2:702215/1‑140 (MQ=255)

             cgGCAAAAACCTGCGGATCATCAATGGCGTCAATCATGCCGAAATGACCGGTATCTTTGCCGTAACGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACg                                                                                                                          >  1:1682954/1‑138 (MQ=255)

             cgGCAAAAACCTGCGGATCATCAATGGCGTCAATCATGCCGAAATGACCGGTATCTTTGCCGTAACGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGcc                                                                                                                        <  2:1519169/140‑1 (MQ=255)

             cgGCAAAAACCTGCGGATCATCAATGGCGTCAATCATGCCGAAATGACCGGTATCTTTGCCGTAACGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGcc                                                                                                                        >  2:1785155/1‑140 (MQ=255)

              ggCAAAAACCTGCGGATCATCAATGGCGTCAATCATGCCGAAATGACCGGTATCTTTGCCGTAACGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCt                                                                                                                       <  2:1654505/140‑1 (MQ=255)

              ggCAAAAACCTGCGGATCATCAATGGCGTCAATCATGCCGAAATGACCGGTATCTTTGCCGTAACGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCt                                                                                                                       <  1:702215/140‑1 (MQ=255)

                 aaaaaCCTGCGGATCATCAATGGCGTCAATCATGCCGAAATGACCGGTATCTTTGCCGTAACGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGcc                                                                                                                    <  2:837588/140‑1 (MQ=255)

                 aaaaaCCTGCGGATCATCAATGGCGTCAATCATGCCGAAATGACCGGTATCTTTGCCGTAACGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGcc                                                                                                                    <  1:1108419/140‑1 (MQ=255)

                 aaaaaCCTGCGGATCATCAATGGCGTCAATCATGCCGAAATGACCGGTATCTTTGCCGTAACGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGcc                                                                                                                    <  1:237076/140‑1 (MQ=255)

                  aaaaCCTGCGGATCATCAATGGCGTCAATCATGCCGAAATGACCGGTATCTTTGCCGTAACGCTCGCGGTGCAAGGTATCTA‑TTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAg                                                                                                                  <  2:1247898/140‑1 (MQ=255)

                   aaaCCTGCGGATCATCAATGGCGTCAATCATGCCGAAATGACCGGTATCTTTGCCGTAACGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAg                                                                                                                  <  2:293475/140‑1 (MQ=255)

                   aaaCCTGCGGATCATCAATGGCGTCAATCATGCCGAAATGACCGGTATCTTTGCCGTAACGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAg                                                                                                                  <  1:1072141/140‑1 (MQ=255)

                    aaCCTGCGGATCATCAATGGCGTCAATCATGCCGAAATGACCGGTATCTTTGCCGTAACGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAga                                                                                                                 <  2:1034602/140‑1 (MQ=255)

                         gCGGATCATCAATGGCGTCAATCATGCCGAAATGACCGGTATCTTTGCCGTAACGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGata                                                                                                            >  1:693179/1‑140 (MQ=255)

                            gATCATCAATGGCGTCAATCATGCCGAAATGACCGGTATCTTTGCCGTAACGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATgg                                                                                                         >  2:943137/1‑140 (MQ=255)

                             atcatcAATGGCGTCAATCATGCCGAAATGACCGGTATCTTTGCCGTAACGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAg                                                                                                                  <  1:1060872/130‑1 (MQ=255)

                             atcatcAATGGCGTCAATCATGCCGAAATGACCGGTATCTTTGCCGTAACGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGgt                                                                                                        >  2:1402277/1‑140 (MQ=255)

                              tcatcaATGGCGTCAATCATGCCGAAATGACCGGTATCTTTGCCGTAACGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGgtc                                                                                                       >  2:1436986/1‑140 (MQ=255)

                              tcatcaATGGCGTCAATCATGCCGAAATGACCGGTATCTTTGCCGTAACGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGgtc                                                                                                       <  2:436442/140‑1 (MQ=255)

                                atcaATGGCGTCAATCATGCCGAAATGACCGGTATCTTTGCCGTAACGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGgtccg                                                                                                     <  1:1438063/140‑1 (MQ=255)

                                 tcaATGGCGTCAATCATGCCGAAATGACCGGTATCTTTGCCGTAACGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGgtccgt                                                                                                    >  2:936558/1‑140 (MQ=255)

                                   aaTGGCGTCAATCATGCCGAAATGACCGGTATCTTTGCCGTAACGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGgtccgtcc                                                                                                  <  1:936558/140‑1 (MQ=255)

                                         gTCAATCATGCCGAAATGACCGGTATCTTTGCCGTAACGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGAt                                                                                            >  2:779487/1‑140 (MQ=255)

                                          tCAATCATGCCGAAATGACCGGTATCTTTGCCGTAACGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGAtt                                                                                           >  1:105819/1‑140 (MQ=255)

                                          tCAATCATGCCGAAATGACCGGTATCTTTGCCGTAACGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGAtt                                                                                           >  1:179604/1‑140 (MQ=255)

                                              tCATGCCGAAATGACCGGTATCTTTGCCGTAACGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTc                                                                                       <  2:1536264/140‑1 (MQ=255)

                                                 tGCCGAAATGACCGGTATCTTTGCCGTAACGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCa                                                                                    >  1:114203/1‑140 (MQ=255)

                                                 tGCCGAAATGACCGGTATCTTTGCCGTAACGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCa                                                                                    <  2:251079/140‑1 (MQ=255)

                                                 tGCCGAAATGACCGGTATCTTTGCCGTAACGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCa                                                                                    <  1:1402277/140‑1 (MQ=255)

                                                   ccGAAATGACCGGTATCTTTGCCGTAACGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGTCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGa                                                                                  >  1:351595/1‑140 (MQ=255)

                                                        aTGACCGGTATCTTTGCCGTAACGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAAt                                                                             >  2:1627236/1‑140 (MQ=255)

                                                          gACCGGTATCTTTGCCGTAACGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGc                                                                           <  2:105819/140‑1 (MQ=255)

                                                             cGGTATCTTTGCCGTAACGCTCGCGGTGCAAGGTATCTATTTGCGCGGTTATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCg                                                                        <  1:214639/140‑1 (MQ=255)

                                                                 aTCTTTGCCGTAACGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGc                                                                    <  2:717764/140‑1 (MQ=255)

                                                                     ttGCCGTAACGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTc                                                                <  2:1181078/140‑1 (MQ=255)

                                                                     ttGCCGTAACGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTc                                                                <  2:365798/140‑1 (MQ=255)

                                                                      tGCCGTAACGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCa                                                               >  1:928233/1‑140 (MQ=255)

                                                                      tGCCGTAACGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCa                                                               <  2:782417/140‑1 (MQ=255)

                                                                      tGCCGTAACGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCa                                                               <  2:928233/140‑1 (MQ=255)

                                                                      tGCCGTAACGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGACCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCa                                                               >  1:148181/1‑140 (MQ=255)

                                                                        ccGTAACGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAAt                                                             <  2:179604/140‑1 (MQ=255)

                                                                        ccGTAACGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAAt                                                             <  2:1514159/140‑1 (MQ=255)

                                                                         cGTAACGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATg                                                            <  2:114203/140‑1 (MQ=255)

                                                                         cGTAACGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATg                                                            >  2:339710/1‑140 (MQ=255)

                                                                          gTAACGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGa                                                           >  2:1747070/1‑140 (MQ=255)

                                                                             aCGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATa                                                        >  2:882517/1‑140 (MQ=255)

                                                                              cGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATaa                                                       <  1:779487/140‑1 (MQ=255)

                                                                                cTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAg                                                     <  1:1627236/140‑1 (MQ=255)

                                                                                   gcgGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAgggg                                                  >  1:743972/1‑140 (MQ=255)

                                                                                   gcgGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAgggg                                                  <  1:882517/140‑1 (MQ=255)

                                                                                   gcgGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAgggg                                                  <  1:889049/140‑1 (MQ=255)

                                                                                        gCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTTCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATc                                             <  1:685569/140‑1 (MQ=255)

                                                                                        gCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATc                                             <  2:1148468/140‑1 (MQ=255)

                                                                                        gCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATc                                             <  2:1659991/140‑1 (MQ=255)

                                                                                        gCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATc                                             <  2:1051895/140‑1 (MQ=255)

                                                                                                tCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTgg                                     <  2:1314184/140‑1 (MQ=255)

                                                                                                 cTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGa                                    >  1:384667/1‑140 (MQ=255)

                                                                                                 cTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGa                                    >  1:1439485/1‑140 (MQ=255)

                                                                                                 cTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGa                                    >  1:619178/1‑140 (MQ=255)

                                                                                                 cTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGa                                    >  2:695914/1‑140 (MQ=255)

                                                                                                 cTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGa                                    >  2:1755746/1‑140 (MQ=255)

                                                                                                      tGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGAtcgtc                               >  1:1222386/1‑140 (MQ=255)

                                                                                                      tGCGCGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGAtcgtc                               <  2:693179/140‑1 (MQ=255)

                                                                                                       gcgcGGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGAtcgtcg                              >  1:779911/1‑140 (MQ=255)

                                                                                                        cgcgGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATc                                             >  2:437632/1‑124 (MQ=255)

                                                                                                        cgcgGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATc                                             <  1:437632/124‑1 (MQ=255)

                                                                                                        cgcgGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCgg                             >  2:1623255/1‑140 (MQ=255)

                                                                                                        cgcgGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCgg                             >  1:1698211/1‑140 (MQ=255)

                                                                                                          cgGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGa                           >  1:1445194/1‑140 (MQ=255)

                                                                                                          cgGTAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGa                           >  2:497404/1‑140 (MQ=255)

                                                                                                             tAATACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATaa                        <  1:1683274/140‑1 (MQ=255)

                                                                                                                tACGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGt                     >  1:54899/1‑140 (MQ=255)

                                                                                                                  cGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGtga                   <  2:1698211/140‑1 (MQ=255)

                                                                                                                  cGCCCAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGtga                   <  1:1623255/140‑1 (MQ=255)

                                                                                                                     ccAACTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGtgatga                >  2:546839/1‑140 (MQ=255)

                                                                                                                       aaCTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACg              >  2:104702/1‑140 (MQ=255)

                                                                                                                       aaCTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACg              >  2:620691/1‑140 (MQ=255)

                                                                                                                       aaCTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACg              >  1:950841/1‑140 (MQ=255)

                                                                                                                       aaCTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACg              >  2:1419701/1‑140 (MQ=255)

                                                                                                                         cTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGGa            <  1:285765/140‑1 (MQ=255)

                                                                                                                         cTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGGa            >  2:40715/1‑140 (MQ=255)

                                                                                                                         cTATCTGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGGa            >  1:50082/1‑140 (MQ=255)

                                                                                                                              tGCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGGAAAAGc       <  1:183923/140‑1 (MQ=255)

                                                                                                                               gCCCCGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGGAAAAGCg      >  1:1227260/1‑140 (MQ=255)

                                                                                                                                 cccGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGGAAAAGCGAt    >  1:1209666/1‑140 (MQ=255)

                                                                                                                                 cccGCGTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGGAAAAGCGAt    >  1:1186390/1‑140 (MQ=255)

                                                                                                                                   cgcgTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGGAAAAGCGATaa  <  1:989771/140‑1 (MQ=255)

GCGCCAAACAACGCGGCAAAAACCTGCGGATCATCAATGGCGTCAATCATGCCGAAATGACCGGTATCTTTGCCGTAACGCTCGCGGTGCAAGGTATCTATTTGCGCGGTAATACGCCCAACTATCTGCCCCGCTTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTCGCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGATAAAGTGATGACGGAAAAGCGATAA  >  NC_000913/3129851‑3130121

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`