Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,187,237	G→A	A335V (GCA→GTA)	roxA ←	ribosomal protein‑arginine oxygenase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,187,237	0	G	A	100.0%	299.0 / NA	85	A335V (GCA→GTA)	roxA	ribosomal protein‑arginine oxygenase
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (47/38);  total (47/38)

CCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCCGCGAGCATCGCGAGGAATGACGGATCTTCCAGCGCATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTGCATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACACGTCGTCGCCAATGCGCAATACGCGCAGACCACCCAGGCGCACCAGCACTTCACCTTGTTTCAGCGCATCGTAGATTTCATCCGG  >  NC_000913/1187102‑1187373                                                                                                                                        |                                                                                                                                         ccGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCCGCGAGCATCGCGAGGAATGACGGATCTTCCAGCGCATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATc                                                                                                                                      <  2:879829/140‑1 (MQ=255)     cTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCCGCGAGCATCGCGAGGAATGACGGATCTTCCAGCGCATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGt                                                                                                                                  <  1:1170556/140‑1 (MQ=255)     cTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCCGCGAGCATCGCGAGGAATGACGGATCTTCCAGCGCATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGt                                                                                                                                  >  1:460827/1‑140 (MQ=255)           tCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCCGCGAGCATCGCGAGGAATGACGGATCTTCCAGCGCATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGa                                                                                                                            <  1:190155/140‑1 (MQ=255)                          cGAAGAACCAATACCCGCTATTGACCAGCGCCGCGAGCATCGCGAGGAATGACGGATCTTCCAGCGCATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGa                                                                                                                            <  2:1523685/125‑1 (MQ=255)                          cGAAGAACCAATACCCGCTATTGACCAGCGCCGCGAGCATCGCGAGGAATGACGGATCTTCCAGCGCATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGa                                                                                                                            >  1:1523685/1‑125 (MQ=255)                          cGAAGAACCAATACCCGCTATTGACCAGCGCCGCGAGCATCGCGAGGAATGACGGATCTTCCAGCGCATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCg                                                                                                             >  1:328320/1‑140 (MQ=255)                          cGAAGAACCAATACCCGCTATTGACCAGCGCCGCGAGCATCGCGAGGAATGACGGATCTTCCAGCGCATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCg                                                                                                             >  2:1178443/1‑140 (MQ=255)                          cGAAGAACCAATACCCGCTATTGACCAGCGCCGCGAGCATCGCGAGGAATGACGGATCTTCCAGCGCATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCg                                                                                                             >  1:1703223/1‑140 (MQ=255)                           gaagaaCCAATACCCGCTATTGACCAGCGCCGCGAGCATCGCGAGGAATGACGGATCTTCCAGCGCATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGa                                                                                                            <  2:328320/140‑1 (MQ=255)                            aagaaCCAATACCCGCTATTGACCAGCGCCGCGAGCATCGCGAGGAATGACGGATCTTCCAGCGCATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGAt                                                                                                           <  1:1614791/140‑1 (MQ=255)                            aagaaCCAATACCCGCTATTGACCAGCGCCGCGAGCATCGCGAGGAATGACGGATCTTCCAGCGCAACGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGAAGGCGCGGGGAATCGaa                                                                                                           >  2:842728/1‑139 (MQ=255)                                     tagcgggtATTGACCAGCGCCGCGAGCATCGCGAGGAATGACGGATCTTCCAGCGCATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCAcc                                                                                                  >  1:1439261/8‑140 (MQ=255)                                      aCCCGCTATTGACCAGCGCCGCGAGCATCGCGAGGAATGACGGATCTTCCAGCGCATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCa                                                                                                 <  1:1178443/140‑1 (MQ=255)                                          gCTATTGACCAGCGCCGCGAGCATCGCGAGGAATGACGGATCTTCCAGCGCATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTgg                                                                                             >  2:1569977/1‑140 (MQ=255)                                           cTATTGACCAGCGCCGCGAGCATCGCGAGGAATGACGGATCTTCCAGCGCATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGc                                                                                            >  2:939901/1‑140 (MQ=255)                                           cTATTGACCAGCGCCGCGAGCATCGCGAGGAATGACGGATCTTCCAGCGCATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGc                                                                                            >  1:12836/1‑140 (MQ=255)                                            tATTGACCAGCGCCGCGAGCATCGCGAGGAATGACGGATCTTCCAGCGCATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCa                                                                                           >  2:544351/1‑140 (MQ=255)                                            tATTGACCAGCGCCGCGAGCATCGCGAGGAATGACGGATCTTCCAGCGCATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCa                                                                                           >  1:342207/1‑140 (MQ=255)                                               tGACCAGCGCCGCGAGCATCGCGAGGAATGACGGATCTTCCAGCGCATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATac                                                                                        >  1:330642/1‑140 (MQ=255)                                               tGACCAGCGCCGCGAGCATCGCGAGGAATGACGGATCTTCCAGCGCATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGAACTTCTCACCATTGGCATac                                                                                        >  1:821820/1‑140 (MQ=255)                                               tGACCAGCGCCGCGAGCATCGCGAGGAATGACGGATCTTCCAGCGCATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTCCGGGGAATCGATCTTCTCACCATTGGCATac                                                                                        >  1:681021/1‑140 (MQ=255)                                                 aCCAGCGCCGCGAGCATCGCGAGGAATGACGGATCTTCCAGCGCATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCa                                                                                                 >  2:792904/1‑129 (MQ=255)                                                 aCCAGCGCCGCGAGCATCGCGAGGAATGACGGATCTTCCAGCGCATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCa                                                                                                 <  1:792904/129‑1 (MQ=255)                                                   cAGCGCCGCGAGCATCGCGAGGAATGACGGATCTTCCAGCGCATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACAcgt                                                                                    <  1:544351/140‑1 (MQ=255)                                                      cgccgcGAGCATCGCGAGGAATGACGGATCTTCCAGCGCATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACAcgtcgt                                                                                 >  1:944595/1‑140 (MQ=255)                                                      cgccgcGAGCATCGCGAGGAATGACGGATCTTCCAGCGCATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACAcgtcgt                                                                                 >  2:258002/1‑140 (MQ=255)                                                      cgccgcGAGCATCGCGAGGAATGACGGATCTTCCAGCGCATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACAcgtcgt                                                                                 >  1:1166648/1‑140 (MQ=255)                                                      cgccgcGAGCATCGCGAGGAATGACGGATCTTCCAGCGCATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACAcgtcgt                                                                                 >  1:520993/1‑140 (MQ=255)                                                        ccgcGAGCATCGCGAGGAATGACGGATCTTCCAGCGCATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACACGtcgtcg                                                                               >  1:1302788/1‑140 (MQ=255)                                                        ccgcGAGCATCGCGAGGAATGACGGATCTTCCAGCGCATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACACGtcgtcg                                                                               >  2:115562/1‑140 (MQ=255)                                                           cgAGCATCGCGAGGAATGACGGATCTTCCAGCGCATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACACGTCGTCGCCa                                                                            >  1:50475/1‑140 (MQ=255)                                                           cgAGCATCGCGAGGAATGACGGATCTTCCAGCGCATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACACGTCGTCGCCa                                                                            >  1:549366/1‑140 (MQ=255)                                                             aGCATCGCGAGGAATGACGGATCTTCCAGCGCATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACACGTCGTCGCCAAt                                                                          >  2:1620254/1‑140 (MQ=255)                                                                aTCGCGAGGAATGACGGATCTTCCAGCGCATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACACGTCGTCGCCAATgcg                                                                       >  2:1633800/1‑140 (MQ=255)                                                                  cgcgAGGAATGACGGATCTTCCAGCGCATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGAACTTCTCACCATTGGCATACACGTCGTCGCCAATGCGCa                                                                     <  2:821820/140‑1 (MQ=255)                                                                   gcgAGGAATGACGGATCTTCCAGCGCATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACACGTCGTCGCCAATGCGCaa                                                                    <  2:1703223/140‑1 (MQ=255)                                                                    cgAGGAATGACGGATCTTCCAGCGCATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCTCCATTGGCATACACGTCGTCGCCAATGCGCAAt                                                                   <  2:460827/140‑1 (MQ=255)                                                                    cgAGGAATGACGGATCTTCCAGCGCATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACACGTCGTCGCCAATGCGCAAt                                                                   >  2:539113/1‑140 (MQ=255)                                                                    cgAGGAATGACGGATCTTCCAGCGCATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACACGTCGTCGCCAATGCGCAAt                                                                   <  1:1569977/140‑1 (MQ=255)                                                                      aGGAATGACGGATCTTCCAGCGCATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACACGTCGTCGCCAATGCGCAATAc                                                                 >  1:1534445/1‑140 (MQ=255)                                                                        gAATGACGGATCTTCCAGCGCATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACACGTCGTCGCCAATGCGCAATAcgc                                                               <  2:520993/140‑1 (MQ=255)                                                                         aaTGACGGATCTTCCAGCGCATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACACGTCGTCGCCAATGCGCAATAcgcg                                                              <  2:681021/140‑1 (MQ=255)                                                                          aTGACGGATCTTCCAGCGCATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACACGTCGTCGCCAATGCGCAATACgcgc                                                             >  1:1411058/1‑140 (MQ=255)                                                                             aCGGATCTTCCAGCGCATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACACGTCGTCGCCAATGCGCAATACGCGCAGa                                                          <  1:258002/140‑1 (MQ=255)                                                                              cGGATCTTCCAGCGCATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACACGTCGTCGCCAATGCGCAATACGCGCAGac                                                         >  1:1063468/1‑140 (MQ=255)                                                                                   cTTCCAGCGCATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACACGTCGTCGCCAATGCGCAATACGCGCAGACCAccc                                                    >  1:883013/1‑140 (MQ=255)                                                                                   cTTCCAGCGCATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACACGTCGTCGCCAATGCGCAATACGCGCAGACCAccc                                                    >  1:290955/1‑140 (MQ=255)                                                                                   cTTCCAGCGCATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACACGTCGTCGCCAATGCGCAATACGCGCAGACCAccc                                                    >  1:1426584/1‑140 (MQ=255)                                                                                     tCCAGCGCATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACACGTCGTCGCCAATGCGCAATACGCGCAGACCACCCAg                                                  >  1:464220/1‑140 (MQ=255)                                                                                      ccAGCGCATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACACGTCGTCGCCAATGCGCAATACGCGCAGACCACCCAgg                                                 <  2:883013/140‑1 (MQ=255)                                                                                      ccAGCGCATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACACGTCGTCGCCAATGCGCAATACGCGCAGACCACCCAgg                                                 <  2:1534445/140‑1 (MQ=255)                                                                                       cAGCGCATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACACGTCGTCGCCAATGCGCAATACGCGCAGACCACCCAGgc                                                >  2:992844/1‑140 (MQ=255)                                                                                       cAGCGCATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACACGTCGTCGCCAATGCGCAATACGCGCAGACCACCCAGgc                                                >  1:1719602/1‑140 (MQ=255)                                                                                       cAGCGCATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACACGTCGTCGCCAATGCGCAATACGCGCAGACCACCCAGgc                                                <  1:1620254/140‑1 (MQ=255)                                                                                         gcgcATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACACGTCGTCGCCAATGCGCAATACGCGCAGACCACCCAGgcgc                                              <  2:1411058/140‑1 (MQ=255)                                                                                         gcgcATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACACGTCGTCGCCAATGCGCAATACGCGCAGACCACCCAGgcgc                                              >  2:384823/1‑140 (MQ=255)                                                                                         gcgcATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACACGTCGTCGCCAATGCGCAATACGCGCAGACCACCCAGgcgc                                              >  1:1508425/1‑140 (MQ=255)                                                                                          cgcATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACACGTCGTCGCCAATGCGCAATACGCGCAGACCACCCAGGCGCa                                             >  2:724027/1‑140 (MQ=255)                                                                                            cATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACACGTCGTCGCCAATGCGCAATACGCGCAGACCACCCAGGCGCAcc                                           >  1:534118/1‑140 (MQ=255)                                                                                            cATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATATTCTCACCATTGGCATACACGTCGTCGCCAATGCGCAATACGCGCAGACCACCCAGGCGCAcc                                           <  1:1596934/140‑1 (MQ=255)                                                                                             aTCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACACGTCGTCGCCAATGCGCAATACGCGCAGACCACCCAGGCGCACCa                                          >  1:1402857/1‑140 (MQ=255)                                                                                                 ccAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACACGTCGTCGCCAATGCGCAATACGCGCAGACCACCCAGGCGCACCAGCAc                                      >  2:1406222/1‑140 (MQ=255)                                                                                                   aaaaTTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACACGTCGTCGCCAATGCGCAATACGCGCAGACCACCCAGGCGCACCAGCACtt                                    <  1:724027/140‑1 (MQ=255)                                                                                                   aaaaTTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACACGTCGTCGCCAATGCGCAATACGCGCAGACCACCCAGGCGCACCAGCACtt                                    <  2:12836/140‑1 (MQ=255)                                                                                                    aaaTTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACACGTCGTCGCCAATGCGCAATACGCGCAGACCACCCAGGCGCACCAGCACTTc                                   >  2:377947/1‑140 (MQ=255)                                                                                                     aaTTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACACGTCGTCGCCAATGCGCAATACGCGCAGACCACCCAGGCGCACCAGCACTTCa                                  <  2:1063468/140‑1 (MQ=255)                                                                                                     aaTTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACACGTCGTCGCCAATGCGCAATACGCGCAGACCACCCAGGCGCACCAGCACTTCa                                  <  2:1426584/140‑1 (MQ=255)                                                                                                     aaTTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACACGTCGTCGCCAATGCGCAATACGCGCAGACCACCCAGGCGCACCAGCACTTCa                                  >  1:246760/1‑140 (MQ=255)                                                                                                       ttCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACACGTCGTCGCCAATGCGCAATACGCGCAGACCACCCAGGCGCACCAGCACTTCAcc                                <  2:440891/140‑1 (MQ=255)                                                                                                        tctcCGCAGTCAGCGCAATGTTGCTGGCGAGTACACCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACACGTCGTCGCCAATGCGCAATACGCGCAGACCACCCAGGCGCACCAGCACTTCACCt                               <  1:842728/140‑1 (MQ=255)                                                                                                            cGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACACGTCGTCGCCAATGCGCAATACGCGCAGACCACCCAGGCGCACCAGCACTTCACCTTGtt                           <  2:955382/140‑1 (MQ=255)                                                                                                            cGCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACACGTCGTCGCCAATGCGCAATACGCGCAGACCACCCAGGCGCACCAGCACTTCACCTTGtt                           >  1:459036/1‑140 (MQ=255)                                                                                                             gCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACACGTCGTCGCCAATGCGCAATACGCGCAGACCACCCAGGCGCACCAGCACTTCACCTTGttt                          <  2:1439261/140‑1 (MQ=255)                                                                                                             gCAGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACACGTCGTCGCCAATGCGCAATACGCGCAGACCACCCAGGCGCACCAGCACTTCACCTTGttt                          <  2:549366/140‑1 (MQ=255)                                                                                                               aGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACACGTCGTCGCCAATGCGCAATACGCGCAGACCACCCAGGCGCACCAGCACTTCACCTTGTTTCa                        <  1:115562/140‑1 (MQ=255)                                                                                                               aGTCAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACACGTCGTCGCCAATGCGCAATACGCGCAGACCACCCAGGCGCACCAGCACTTCACCTTGTTTCa                        <  2:290955/140‑1 (MQ=255)                                                                                                                  cAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACACGTCGTCGCCAATGCGCAATACGCGCAGACCACCCAGGCGCACCAGCACTTCACCTTGTTTCAgcg                     <  1:1696898/140‑1 (MQ=255)                                                                                                                  cAGCGCAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACACGTCGTCGCCAATGCGCAATACGCGCAGACCACCCAGGCGCACCAGCACTTCACCTTGTTTCAgcg                     <  2:1402857/140‑1 (MQ=255)                                                                                                                      gcAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACACGTCGTCGCCAATGCGCAATACGCGCAGACCACCCAGGCGCACCAGCACTTCACCTTGTTTCAGCGCATc                 >  1:189516/1‑140 (MQ=255)                                                                                                                      gcAATGTTGCTGGCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACACGTCGTCGCCAATGCGCAATACGCGCAGACCACCCAGGCGCACCAGCACTTCACCTTGTTTCAGCGCATc                 >  2:1215812/1‑140 (MQ=255)                                                                                                                                 ggCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACACGTCGTCGCCAATGCGCAATACGCGCAGACCACCCAGGCGCACCAGCACTTCACCTTGTTTCAGCGCATCGTAGATTTCAt      <  1:939901/140‑1 (MQ=255)                                                                                                                                  gCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACACGTCGTCGCCAATGCGCAATACGCGCAGACCACCCAGGCGCACCAGCACTTCACCTTGTTTCAgcg                     >  1:448141/1‑124 (MQ=255)                                                                                                                                  gCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACACGTCGTCGCCAATGCGCAATACGCGCAGACCACCCAGGCGCACCAGCACTTCACCTTGTTTCAgcg                     <  2:448141/124‑1 (MQ=255)                                                                                                                                  gCGAGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACACGTCGTCGCCAATGCGCAATACGCGCAGACCACCCAGGCGCACCAGCACTTCACCTTGTTTCAGCGCATCGTAGATTTCATc     <  2:1166648/140‑1 (MQ=255)                                                                                                                                     aGTACATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACACGTCGTCGCCAATGCGCAATACGCGCAGACCACCCAGGCGCACCAGCACTTCACCTTGTTTCAGCGCATCGTAGATTTCATCCgg  <  2:50475/140‑1 (MQ=255)                                                                                                                                        |                                                                                                                                         CCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCCGCGAGCATCGCGAGGAATGACGGATCTTCCAGCGCATCGCCAAAATTCTCCGCAGTCAGCGCAATGTTGCTGGCGAGTGCATCCAGTGCCGGACGGTGCGGGGAATCGATCTTCTCACCATTGGCATACACGTCGTCGCCAATGCGCAATACGCGCAGACCACCCAGGCGCACCAGCACTTCACCTTGTTTCAGCGCATCGTAGATTTCATCCGG  >  NC_000913/1187102‑1187373

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑