BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,696,304	T→C	intergenic (‑233/+158)	uidA ← / ← uidR	beta‑glucuronidase/DNA‑binding transcriptional repressor UidR

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,696,304	0	T	C	100.0%	397.5 / NA	103	intergenic (‑233/+158)	uidA/uidR	beta‑glucuronidase/DNA‑binding transcriptional repressor UidR
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (45/58); total (45/58)

Only 100 of 103 total aligned reads displayed.

AAGAGAAATGGAAATAAAAAGAACTGACACCGCGATCAAAAAACCAAAAACTGCAATACCCACAGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGTTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTA  >  NC_000913/1696169‑1696433

aaGAGAAATGGAAATAAAAAGAACTGACACCGCGATCAAAAAACCAAAAACTGCAATACCCACAGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGa                                                                                                                               <  1:1554550/140‑1 (MQ=255)

  gagaAATGGAAATAAAAAGAACTGACACCGCGATCAAAAAACCAAAAACTGCAATACCCACAGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGc                                                                                                                             <  2:262526/140‑1 (MQ=255)

   agaAATGGAAATAAAAAGAACTGACACCGCGATCAAAAAACCAAAAACTGCAATACCCACAGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCg                                                                                                                            >  1:444865/1‑140 (MQ=255)

   agaAATGGAAATAAAAAGAACTGACACCGCGATCAAAAAACCAAAAACTGCAATACCCACAGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCg                                                                                                                            >  2:22844/1‑140 (MQ=255)

     aaaTGGAAATAAAAAGAACTGACACCGCGATCAAAAAACCAAAAACTGCAATACCCACAGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTa                                                                                                                          >  2:1414727/1‑140 (MQ=255)

          gAAATAAAAAGAACTGACACCGCGATCAAAAAACCAAAAACTGCAATACCCACAGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTggg                                                                                                                     <  1:22844/140‑1 (MQ=255)

           aaaTAAAAAGAACTGACACCGCGATCAAAAAACCAAAAACTGCAATACCCACAGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGa                                                                                                                    <  2:833978/140‑1 (MQ=255)

                  aaGAACTGACACCGCGATCAAAAAACCAAAAACTGCAATACCCACAGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATaa                                                                                                             <  1:1134381/140‑1 (MQ=255)

                   aGAACTGACACCGCGATCAAAAAACCAAAAACTGCAATACCCACAGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATaaa                                                                                                            <  1:936651/140‑1 (MQ=255)

                   aGAACTGACACCGCGATCAAAAAACCAAAAACTGCAATACCCACAGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATaaa                                                                                                            <  1:661516/140‑1 (MQ=255)

                   aGAACTGACACCGCGATCAAAAAACCAAAAACTGCAATACCCACAGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATaaa                                                                                                            <  1:60012/140‑1 (MQ=255)

                     aaCTGACACCGCGATCAAAAAACCAAAAACTGCAATACCCACAGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAAct                                                                                                          <  1:1546733/140‑1 (MQ=255)

                       cTGACACCGCGATCAAAAAACCAAAAACTGCAATACCCACAGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAActct                                                                                                        >  1:1302485/1‑140 (MQ=255)

                         gACACCGCGATCAAAAAACCAAAAACTGCAATACCCACAGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCa                                                                                                      <  1:1320650/140‑1 (MQ=255)

                         gACACCGCGATCAAAAAACCAAAAACTGCAATACCCACAGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCACTCGAGCGTATTGGGAACGATAAACTCTCa                                                                                                      <  2:1353118/140‑1 (MQ=255)

                          acacCGCGATCAAAAAACCAAAAACTGCAATACCCACAGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTgg                                                                                                                      <  1:744590/123‑1 (MQ=255)

                          acacCGCGATCAAAAAACCAAAAACTGCAATACCCACAGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTgg                                                                                                                      >  2:744590/1‑123 (MQ=255)

                            acCGCGATCAAAAAACCAAAAACTGCAATACCCACAGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGa                                                                                                   >  1:854881/1‑140 (MQ=255)

                              cgcgATCAAAAAACCAAAAACTGCAATACCCACAGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACa                                                                                                 <  2:1380248/140‑1 (MQ=255)

                              cgcgATCAAAAAACCAAAAACTGCAATACCCACAGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACa                                                                                                 <  1:1352058/140‑1 (MQ=255)

                              cgcgATCAAAAAACCAAAAACTGCAATACCCACAGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACa                                                                                                 <  2:1062103/140‑1 (MQ=255)

                              cgcgATCAAAAAACCAAAAACTGCAATACCCACAGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGAAACGATAAACTCTCATGACa                                                                                                 <  2:1220740/140‑1 (MQ=255)

                                  aTCAAAAAACCAAAAACTGCAATACCCACAGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGa                                                                                                   <  1:169931/134‑1 (MQ=255)

                                  aTCAAAAAACCAAAAACTGCAATACCCACAGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGa                                                                                                   >  2:169931/1‑134 (MQ=255)

                                            cAAAAACTGCAATACCCACAGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGa                                                                                   >  1:853401/1‑140 (MQ=255)

                                                   tGCAATACCCACAGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATAtttt                                                                            <  1:887185/140‑1 (MQ=255)

                                                   tGCAATACCCACAGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATAtttt                                                                            <  2:459108/140‑1 (MQ=255)

                                                        tACCCACAGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTggggg                                                                       <  2:1302485/140‑1 (MQ=255)

                                                           ccACAGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGaa                                                                    <  1:1201305/140‑1 (MQ=255)

                                                             acaGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTgggggg                                                                      <  1:1036969/136‑1 (MQ=255)

                                                             acaGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTgggggg                                                                      >  2:1036969/1‑136 (MQ=255)

                                                               aGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATtct                                                                >  1:741805/1‑140 (MQ=255)

                                                                  gTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCg                                                             >  2:234966/1‑140 (MQ=255)

                                                                  gTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCg                                                             >  2:476902/1‑140 (MQ=255)

                                                                   tGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGa                                                            >  2:1169702/1‑140 (MQ=255)

                                                                   tGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGa                                                            >  2:1146932/1‑140 (MQ=255)

                                                                    gATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCg                                                             <  1:647218/138‑1 (MQ=255)

                                                                    gATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCg                                                             >  2:647218/1‑138 (MQ=255)

                                                                    gATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGaa                                                           >  2:561450/1‑140 (MQ=255)

                                                                     atatAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAg                                                          >  2:1443414/1‑140 (MQ=255)

                                                                      tataGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGc                                                         >  2:430843/1‑140 (MQ=255)

                                                                         aGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCgg                                                      <  2:444865/140‑1 (MQ=255)

                                                                           aTCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCg                                                             >  2:1611067/1‑131 (MQ=255)

                                                                           aTCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCg                                                             <  1:1611067/131‑1 (MQ=255)

                                                                           aTCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCgg                                                      <  1:50270/138‑1 (MQ=255)

                                                                           aTCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCgg                                                      >  2:50270/1‑138 (MQ=255)

                                                                           aTCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGa                                                    >  2:545811/1‑140 (MQ=255)

                                                                           aTCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGa                                                    >  1:1675350/1‑140 (MQ=255)

                                                                           aTCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGa                                                    >  2:460296/1‑140 (MQ=255)

                                                                             cGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGa                                                    <  2:492288/138‑1 (MQ=255)

                                                                             cGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGa                                                    >  1:492288/1‑138 (MQ=255)

                                                                             cGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAg                                                  >  2:7892/1‑140 (MQ=255)

                                                                              gCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAgg                                                 >  1:924388/1‑140 (MQ=255)

                                                                              gCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAgg                                                 >  2:1415524/1‑140 (MQ=255)

                                                                               cATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCg                                                             >  1:931012/1‑127 (MQ=255)

                                                                               cATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCg                                                             <  2:931012/127‑1 (MQ=255)

                                                                               cATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGa                                                >  1:450850/1‑140 (MQ=255)

                                                                                aTTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGAt                                               <  2:853401/140‑1 (MQ=255)

                                                                                aTTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGAt                                               <  2:924388/140‑1 (MQ=255)

                                                                                aTTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGAt                                               >  2:970587/1‑140 (MQ=255)

                                                                                aTTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGAt                                               >  1:1740653/1‑140 (MQ=255)

                                                                                aTTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGAt                                               >  1:849993/1‑140 (MQ=255)

                                                                                          aaaaCAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGca                                     <  2:1267455/140‑1 (MQ=255)

                                                                                          aaaaCAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGca                                     <  1:1146932/140‑1 (MQ=255)

                                                                                          aaaaCAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGca                                     <  1:1169702/140‑1 (MQ=255)

                                                                                          aaaaCAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGca                                     <  1:1443414/140‑1 (MQ=255)

                                                                                          aaaaCAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGca                                     <  2:1675350/140‑1 (MQ=255)

                                                                                          aaaaCAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGca                                     <  1:488265/140‑1 (MQ=255)

                                                                                          aaaaCAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACATTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGca                                     <  1:923327/140‑1 (MQ=255)

                                                                                            aaCAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGcaca                                   <  1:234966/140‑1 (MQ=255)

                                                                                            aaCAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGcaca                                   <  1:476902/140‑1 (MQ=255)

                                                                                              cAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGcaca                                   <  1:985631/138‑1 (MQ=255)

                                                                                               aGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGATGCCGGGAAGGATAATTTTTGCACagag                                >  2:357031/1‑140 (MQ=255)

                                                                                                 cGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGaa                              >  2:1307547/1‑140 (MQ=255)

                                                                                                 cGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGaa                              >  1:178973/1‑140 (MQ=255)

                                                                                                 cGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGaa                              >  2:377416/1‑140 (MQ=255)

                                                                                                   ttGACAGAAGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAAt                            <  1:693499/140‑1 (MQ=255)

                                                                                                           aGCCATAAAATAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGatat                    >  2:503507/1‑140 (MQ=255)

                                                                                                                 aaaaTAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAAcg              >  1:1014153/1‑140 (MQ=255)

                                                                                                                 aaaaTAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAAcg              <  2:1014153/140‑1 (MQ=255)

                                                                                                                 aaaaTAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAAcg              <  2:587454/140‑1 (MQ=255)

                                                                                                                     tAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAAcgcgtg          <  2:854881/140‑3 (MQ=255)

                                                                                                                     tAAGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCggg          <  1:460296/140‑1 (MQ=255)

                                                                                                                       aGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGca        <  1:561450/140‑1 (MQ=255)

                                                                                                                       aGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGca        <  2:1091278/140‑1 (MQ=255)

                                                                                                                       aGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGca        <  1:1414727/140‑1 (MQ=255)

                                                                                                                       aGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGca        <  1:1415524/140‑1 (MQ=255)

                                                                                                                       aGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGca        <  1:924682/140‑1 (MQ=255)

                                                                                                                       aGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGca        <  1:1750782/140‑1 (MQ=255)

                                                                                                                       aGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGca        <  2:501499/140‑1 (MQ=255)

                                                                                                                       aGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGca        >  2:499520/1‑140 (MQ=255)

                                                                                                                       aGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGca        <  2:1740653/140‑1 (MQ=255)

                                                                                                                       aGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGca        <  1:503507/140‑1 (MQ=255)

                                                                                                                       aGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGca        <  2:296752/140‑1 (MQ=255)

                                                                                                                       aGCAACCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTAGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGca        <  1:492298/140‑1 (MQ=255)

                                                                                                                          aaCCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAg     <  2:1677700/140‑1 (MQ=255)

                                                                                                                           aCCGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGt    >  1:214163/1‑140 (MQ=255)

                                                                                                                            ccGAACGTTCGCTCGAGTGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGtt   >  1:999860/1‑140 (MQ=255)

                                                                                                                            ccGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGtt   >  1:1349812/1‑140 (MQ=255)

                                                                                                                             cGAACGTTCGCTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTa  >  1:69247/1‑140 (MQ=255)

AAGAGAAATGGAAATAAAAAGAACTGACACCGCGATCAAAAAACCAAAAACTGCAATACCCACAGCGTGATATAGATCGCATTAATCTTTAAAACAGCGTTGACAGAAGCCATAAAATAAGCAACCGAACGTTCGTTCGAGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTA  >  NC_000913/1696169‑1696433

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`