New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3782021 =	90 (1.190)	3 (0.040)	3/266	8.2	3.6%	coding (542/822 nt)	cysE	serine acetyltransferase
	?	NC_000913	3782214 =	74 (1.010)					coding (349/822 nt)	cysE	serine acetyltransferase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TTTCTGTGACGTTCCAGGTCGATATTCACCCGGCAGCAAAAATTGGTCGCGGTATCATGCTTGACCACGCGACAGGCATCGTCGTTGGTGAAACGGCGGTGATTGAAAACGACGTATCGATTCTGCAATCTGTGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3782156‑3782021 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgacCGATGCGATAGGCCTGCAAGGCATGAAAACCCTTCAGGTATAACAACGGGGTTGAGTATTTATCGACTGCCGGGTCGCGGGTACGCACCGCCTGAATATCACAGGCCGCAGAGGCGATCATTTCCGGGTCAGCGGCG  >  NC_000913/3782214‑3782350                                                                                                                                                                                                                                                                                   TTTCTGTGACGTTCCAGGTCGATATTCACCCGGCAGCAAAAATTGGTCGCGGTATCATGCTTGACCACGCGACAGGCATCGTCGTTGGTGAAACGGCGGTGATTGAAAACGACGTATCGATTTTGCCATCTGTGACCctt                                                                                                                                       >  2:1128926/1‑137            TTCCAGGTCGATATTCACCCGGCAGCAAAAATTGGTCGCGGTATCATGCTTGACCACGCGACAGGCATCGTCGTTGGTGAAACGGCGGTGATTGAAAACGACGTATCGATTCTGCAATCTGTG                                                                                                                                             <  1:17587/123‑1            TTCCAGGTCGATATTCACCCGGCAGCAAAAATTGGTCGCGGTATCATGCTTGACCACGCGACAGGCATCGTCGTTGGTGAAACGGCGGTGATTGAAAACGACGTATCGATTCTGCAATCTGTG                                                                                                                                             >  2:17587/1‑123                                                                                       GGTGAAACGGCGGTGATTGAAAACGACGTATCGATTCTGCAATCTGTGACCGATGCGATAGGCCTGCAAGGCATGAAAACCCTTCAGGTATAACAACGGGGTTGAGTATTTATCGACTGCCGGGTCGCG                                                            <  1:1158992/129‑1                                                                                       GGTGAAACGGCGGTGATTGAAAACGACGTATCGATTCTGCAATCTGTGACCGATGCGATAGGCCTGCAAGGCATGAAAACCCTTCAGGTATAACAACGGGGTTGAGTATTTATCGACTGCCGGGTCGCG                                                            >  2:1158992/1‑129                                                                                                                                    GTGACCGATGCGATAGGCCTGCAAGGCATGAAAACCCTTCAGGTATAACAACGGGGTTGAGTATTTATCGACTGCCGGGTCGCGGGTACGCACCGCCTGAATATCACAGGCCGCAGAGGCGATCATTTCCGGGTCAGCGG    >  1:1176343/1‑140                                                                                                                                     TGACCGATGCGATAGGCCTGCAAGGCATGAAAACCCTTCAGGTATAACAACGGGGTTGAGTATTTATCGACTGCCGGGTCGCGGGTACGCACCGCCTGAATATCACAGGCCGCAGAGGCGATCATTTCCGGGTCAGCGGC   >  2:101474/1‑140                                                                                                                                     TGACCGATGCGATAGGCCTGCAAGGCATGAAAACCCTTCAGGTATAACAACGGGGTTGAGTATTTATCGACTGCCGGGTCGCGGGTACGCACCGCCTGAATATCACAGGCCGCAGAGGCGATCATTTCCGGGTCAGCGGC   >  2:708556/1‑140                                                                                                                                     TGACCGATGCGATAGGCCTGCAAGGCATGAAAACCCTTCAGGTATAACAACGGGGTTGAGTATTTATCGACTGCCGGGTCGCGGGTACGCACCGCCTGAATATCACAGGCCGCAGAGGCGATCATTTCCGGGTCAGCGGC   >  2:95606/1‑140                                                                                                                                      GACCGATGCGATAGGCCTGCAAGGCATGAAAACCCTTCAGGTATAACAACGGGGTTGAGTATTTATCGACTGCCGGGTCGCGGGTACGCACCGCCTGAATATCACAGGCCGCAGAGGCGATCATTTCCGGGTCAGCGGCG  <  1:1242440/140‑1                                                                                                                                      GACCGATGCGATAGGCCTGCAAGGCATGAAAACCCTTCAGGTATAACAACGGGGTTGAGTATTTATCGACTGCCGGGTCGCGGGTACGCACCGCCTGAATATCACAGGCCGCAGAGGCGATCATTTCCGGGTCAGCGGCG  <  1:177450/140‑1                                                                                                                                      GACCGATGCGATAGGCCTGCAAGGCATGAAAACCCTTCAGGTATAACAACGGGGTTGAGTATTTATCGACTGCCGGGTCGCGGGTACGCACCGCCTGAATATCACAGGCCGCAGAGGCGATCATTTCCGGGTCAGCGGCG  <  1:576213/140‑1                                                                                                                                                                                                                                                                                   TTTCTGTGACGTTCCAGGTCGATATTCACCCGGCAGCAAAAATTGGTCGCGGTATCATGCTTGACCACGCGACAGGCATCGTCGTTGGTGAAACGGCGGTGATTGAAAACGACGTATCGATTCTGCAATCTGTGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3782156‑3782021 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgacCGATGCGATAGGCCTGCAAGGCATGAAAACCCTTCAGGTATAACAACGGGGTTGAGTATTTATCGACTGCCGGGTCGCGGGTACGCACCGCCTGAATATCACAGGCCGCAGAGGCGATCATTTCCGGGTCAGCGGCG  >  NC_000913/3782214‑3782350

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.