Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,782,5090AC24.6% 130.8 / 12.2 65V73G (GTA→GGA) ypjAadhesin‑like autotransporter YpjA
Reads supporting (aligned to +/- strand):  ref base A (33/16);  new base C (0/16);  total (33/32)
Fisher's exact test for biased strand distribution p-value = 9.28e-07
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

TCGTACCTGTGGAAATACCCCCGTCATGAATTGACTGTCTGCCACCGTTAATGGTTGTATTATTAGCCTGCCCCACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGTAGTGAAGGCAGCCAT  >  NC_000913/2782372‑2782645
                                                                                                                                         |                                                                                                                                        
tCGTACCTGTGGAAATACCCCCGTCATGAATTGACTGTCTGCCACCGTTAATGGTTGTATTATTAGCCTGCCCCACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATAcc                                                                                                                                        <  1:772414/140‑1 (MQ=255)
          ggAAATACCCCCGTCATGAATTGACTGTCTGCCACCGTTAATGGTTGTATTATTAGCCTGCCCCACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGaa                                                                                                                              >  2:821072/1‑140 (MQ=255)
            aaaTCCCCCCGTCATGAATTGACTGTCTGCCCCCGTTAATGGTTGTATTATTAGCCTGCCCCACAAAATTTTTATGACTTCCTATATCTTGATACCCACCAGATTCAATAAGACTTCCATTAGATCCCCCGCCATGAACa                                                                                                                            <  2:1106162/140‑1 (MQ=255)
            aaaTACCCCCGTCATGAATTGACTGTCTGCCACCGTTAATGGTTGTATTATTAGCCTGCCCCACAAAATTGTTATGACTTCCTATATCTTGATATCCCCCAGATTCAATAAGACTTCCATTAGATCCCCCGCCATGAACa                                                                                                                            <  1:930908/140‑1 (MQ=255)
                 cccccGTCATGAATTGACTGTCTGCCACCGTTAATGGTTGTATTATTAGCCTGCCCCACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTctg                                                                                                                       <  1:476359/140‑1 (MQ=255)
                       tCATGAATTGACTGTCTGCCCCCGTTAATGGTTGTATTATTAGCCTGCCCCACAAAATTTTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATCCCCCGCCATGAACATTCTGCTGGcc                                                                                                                 <  2:144356/140‑1 (MQ=255)
                       tCATGAATTGACTGTCTGCCACCGTTAATGGTTGTATTATTAGCCTGCCCCACAAAATTTTTATGACTTCCTATATCTTGATACCCGCCAGATTCAATAAGATTTCCATTAGATCCCCCGCCATGAACATTCTGCTGGcc                                                                                                                 <  1:821072/140‑1 (MQ=255)
                       tCATGAATTGACTGTCTGCCACCGTTAATGGTTGTATTATTAGCCTGCCCCACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATCCCCCGCCATGAACATTctg                                                                                                                       <  2:539888/134‑1 (MQ=255)
                       tCATGAATTGACTGTCTGCCACCGTTAATGGTTGTATTATTAGCCTGCCCCACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTctg                                                                                                                       >  1:539888/1‑134 (MQ=255)
                       tCATGAATTGACTGTCTGCCACCGTTAATGGTTGTATTATTAGCCTGCCCCACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGcc                                                                                                                 <  1:803589/140‑1 (MQ=255)
                        cATGAATTGACTGTCTGCCACCGTTAATGGTTGTATTATTAGCCTGCCCCACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATCCCCCGCCATGAACATTCTGCTGGCCa                                                                                                                <  1:491455/140‑1 (MQ=255)
                        cATGAATTGACTGTCTGCCACCGTTAATGGTTGTATTATTAGCCTGCCCCACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCa                                                                                                                <  1:338142/140‑1 (MQ=255)
                           gAATTGACTGTCTGCCACCGTTAATGGTTGTATTATTAGCCTGCCCCACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTCGCCATgg                                                                                                             <  1:257472/140‑1 (MQ=255)
                            aaTTGACTGTCTGCCACCGTTAATGGTTGTATTATTAGCCTGCCCCACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGt                                                                                                            >  1:172971/1‑140 (MQ=255)
                             aTTGACTGTCTGCCACCGTTAATGGTTGTATTATTAGCCTGCCCCACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATCCCCCGCCATGAACATTCTGCTGGCCATGGtt                                                                                                           <  1:324430/140‑1 (MQ=255)
                             aTTGACTGTCTGCCACCGTTAATGGTTGTATTATTAGCCTGCCCCACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATCCCCCGCCATGAACATTCTGCTGGCCATGGtt                                                                                                           <  2:986092/140‑1 (MQ=255)
                             aTTGACTGTCTGCCACCGTTAATGGTTGTATTATTAGCCTGCCCCACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATCCCCCGCCATGAACATTCTGCTGGCCATGGtt                                                                                                           <  1:560743/140‑1 (MQ=255)
                             aTTGACTGTCTCCCACCGTTAATGGTTGTATTATTAGCCGGCCCCACAAAATTGTTATGCCTTCCTATATCTTGATATCCCCCAGATTCAATAAGACTTCCATTAGATCCCCCGCCATGAACATTCTGCTGGCCATGGtt                                                                                                           <  2:1064453/140‑1 (MQ=255)
                                 aCTGTCTGCCACCGTTAATGGTTGTATTATTAGCCTGCCCCACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGa                                                                                                         <  2:1198443/138‑1 (MQ=255)
                                 aCTGTCTGCCACCGTTAATGGTTGTATTATTAGCCTGCCCCACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGa                                                                                                         >  1:1198443/1‑138 (MQ=255)
                                     tCTGCCACCGTTAATGGTTGTATTATTAGCCTGCCCCACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATCCCCCGCCATGAACATTTTGCTGGCCATGGTTGATAatat                                                                                                   <  1:54929/140‑1 (MQ=255)
                                     tCTGCCACCGTTAATGGTTGTATTATTAGCCTGCCCCACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAatat                                                                                                   <  1:993099/140‑1 (MQ=255)
                                        gCCACCGTTAATGGTTGTATTATTAGCCTGCCCCACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAg                                                                                                >  1:751322/1‑140 (MQ=255)
                                              tttAATGGTTGTATTATTAGCCTCCCCCAAAAAATTGTTATGACTTCCTATTTCTTGATACCCACCCGTTTCAATAGGCCTTCGTTTAGATCCCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTAt                                                                                          <  2:172971/139‑1 (MQ=255)
                                              gTTAATGGTTGTATTATTAGCCTGCCCCACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTAt                                                                                          <  2:912357/140‑1 (MQ=255)
                                               ttAATGGTTGTATTATTAGCCTGCCCCACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTAtt                                                                                         >  2:1217362/1‑140 (MQ=255)
                                                       tGTATTATTAGCCTGCCCCACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATACCCGGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTAc                                                                                 >  2:450024/1‑140 (MQ=255)
                                                       tGTATTATTAGCCTGCCCCACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTAAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTAc                                                                                 <  2:68658/140‑1 (MQ=255)
                                                         tattatTAGCCTGCCCCACAAAATTGTTATGACTTCCTATACCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGtt                                                                                            <  1:148438/127‑1 (MQ=255)
                                                         tattatTAGCCTGCCCCACAAAATTGTTATGACTTCCTATACCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGtt                                                                                            >  2:148438/1‑127 (MQ=255)
                                                              ttaGCCTGCCCCACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTc                                                                          >  1:560507/1‑140 (MQ=255)
                                                               taGCCTGCCCCACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCa                                                                         >  2:135925/1‑140 (MQ=255)
                                                                aGCCTGCCCCACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCAt                                                                        >  2:540033/1‑140 (MQ=255)
                                                                aGCCTGCCCCACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCAt                                                                        <  1:540033/140‑1 (MQ=255)
                                                                 cccTGCCCCACAAATTTTTTATGACTTCTTATATCTTGATATCCACCAAATTCAAAAATACTTCCATTAGATACCCCGCCATGAACATTATGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATc                                                                       <  2:612211/139‑1 (MQ=255)
                                                                   cTGCCCCACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATCCCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATttg                                                                                       <  2:323208/122‑1 (MQ=255)
                                                                   cTGCCCCACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATttg                                                                                       >  1:323208/1‑122 (MQ=255)
                                                                   cTGCCCCACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCa                                                                     >  1:796267/1‑140 (MQ=255)
                                                                   cTGCCCCACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCa                                                                     >  1:519333/1‑140 (MQ=255)
                                                                   cTGCCCCACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCa                                                                     >  2:282263/1‑140 (MQ=255)
                                                                      ccccACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACtt                                                                  >  1:119395/1‑140 (MQ=255)
                                                                      ccccACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACtt                                                                  >  1:1281406/1‑140 (MQ=255)
                                                                           caAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATCCCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTgg                                                             <  1:35176/140‑1 (MQ=255)
                                                                           aaaaaTTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTgg                                                             <  2:1013344/139‑1 (MQ=255)
                                                                              aaTTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATCCCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTg                                                          <  2:796267/140‑1 (MQ=255)
                                                                                ttGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATCCCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGcc                                                        <  2:44941/140‑1 (MQ=255)
                                                                                      tGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTAc                                                  >  1:1113380/1‑140 (MQ=255)
                                                                                           tCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGtct                                             <  2:751322/140‑1 (MQ=255)
                                                                                             cTATATTTTGATATCCCCCAGATTCAATAAGACTTCAATTAGATCCCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCa                                           <  2:588719/140‑1 (MQ=255)
                                                                                                  tCTTGATATCCACCAGATTAAATAAGACTTCCATTAGATCCCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGtt                                      <  2:990644/140‑1 (MQ=255)
                                                                                                      gATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTAcc                                  >  2:562110/1‑140 (MQ=255)
                                                                                                      gATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTAcc                                  >  1:871800/1‑140 (MQ=255)
                                                                                                      gATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTAcc                                  >  1:374747/1‑140 (MQ=255)
                                                                                                       atatCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGTCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACca                                 >  2:940653/1‑140 (MQ=255)
                                                                                                       atatCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACca                                 >  1:588719/1‑140 (MQ=255)
                                                                                                       atatCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACca                                 >  2:167757/1‑140 (MQ=255)
                                                                                                         atCCACCAGATTCAATAAGACTTCCATTAGATCCCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACcaca                               <  2:519333/140‑1 (MQ=255)
                                                                                                            caccaGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCa                            <  2:871800/140‑1 (MQ=255)
                                                                                                            caccaGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGCTTACCACACCa                            >  1:52870/1‑140 (MQ=255)
                                                                                                            caccaGATTAAATAAGCCTTCCATTAGATCCCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCa                            <  2:1281406/140‑1 (MQ=255)
                                                                                                              ccaGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAAt                          <  2:374747/140‑1 (MQ=255)
                                                                                                              caaGATTCAATAAGACTTCCATTAGATCCCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAAt                          <  2:810520/138‑1 (MQ=255)
                                                                                                                   ttCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACAt                     >  1:451229/1‑140 (MQ=255)
                                                                                                                       aTAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATtagt                 >  2:93510/1‑140 (MQ=255)
                                                                                                                            aCTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGTAGTGa            >  1:432958/1‑140 (MQ=255)
                                                                                                                            aCTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGTAGTGa            >  1:868780/1‑140 (MQ=255)
                                                                                                                                ccATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGTAGTGAAGGc        >  1:125029/1‑140 (MQ=255)
                                                                                                                                ccATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGTAGTGAAGGCa       >  2:43551/1‑140 (MQ=255)
                                                                                                                                  aTTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGTAGTGAAGGCAg      >  1:1233907/1‑140 (MQ=255)
                                                                                                                                      gATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGTAGTGAAGGCAGCCAt  >  2:1129323/1‑140 (MQ=255)
                                                                                                                                         |                                                                                                                                        
TCGTACCTGTGGAAATACCCCCGTCATGAATTGACTGTCTGCCACCGTTAATGGTTGTATTATTAGCCTGCCCCACAAAATTGTTATGACTTCCTATATCTTGATATCCACCAGATTCAATAAGACTTCCATTAGATACCCCGCCATGAACATTCTGCTGGCCATGGTTGATAATATGAGTGTTATTTGTTGTACCTCGTTCATCCACTTTTTGGTTGCCATCTACAGTCTCATCGTTTACCACACCAATAACATTAGTAGTGAAGGCAGCCAT  >  NC_000913/2782372‑2782645

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: