Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,818,760	T→C	intergenic (‑115/+201)	serV ← / ← csrA	tRNA‑Ser/carbon storage regulator

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,818,760	0	T	C	100.0%	356.8 / NA	92	intergenic (‑115/+201)	serV/csrA	tRNA‑Ser/carbon storage regulator
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (41/51);  total (41/51)

CAGCCTCTCGGCCACCTCACCACACGCCTCTTACGAGTGCTTCGAAGAACTTGTTTATCGCTCATCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGTTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATCAACAGAAGAATGGAGGTCTGACAGATAGTAGTAATGCAAAAAAATGGAGACTTAAGTTGAATGAACGGGAGTAAAGCGAAA  >  NC_000913/2818625‑2818895                                                                                                                                        |                                                                                                                                        cAGCCTCTCGGCCACCTCACCACACGCCTCTTACGAGTGCTTCGAAGAACTTGTTTATCGCTCATCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGc                                                                                                                                     <  1:1117451/140‑1 (MQ=255)  aGCCTCTCGGCCACCTCACCACACGCCTCTTACGAGTGCTTCGAAGAACTTGTTTATCGCTCATCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGca                                                                                                                                    <  1:273062/140‑1 (MQ=255)        tcGGCCACCTCACCACACGCCTCTTACGAGTGCTTCGAAGAACTTGTTTATCGCTCATCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTc                                                                                                                              >  1:1222675/1‑140 (MQ=255)         cGGCCACCTCACCACACGCCTCTTACGAGTGCTTCGAAGAACTTGTTTATCGCTCATCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCa                                                                                                                             <  1:738838/140‑1 (MQ=255)         cGGCCACCTCACCACACGCCTCTTACGAGTGCTTCGAAGAACTTGTTTATCGCTCATCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCa                                                                                                                             <  1:806684/140‑1 (MQ=255)           gCCACCTCACCACACGCCTCTTACGAGTGCTTCGAAGAACTTGTTTATCGCTCATCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACg                                                                                                                           <  1:493346/140‑1 (MQ=255)           gCCACCTCACCACACGCCTCTTACGAGTGCTTCGAAGAACTTGTTTATCGCTCATCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACg                                                                                                                           <  1:959255/140‑1 (MQ=255)           gCCACCTCACCACACGCCTCTTACGAGTGCTTCGAAGAACTTGTTTATCGCTCATCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACg                                                                                                                           <  2:1102902/140‑1 (MQ=255)                cTCACCACACGCCTCTTACGAGTGCTTCGAAGAACTTGTTTATCGCTCATCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCaa                                                                                                                      <  2:149307/140‑1 (MQ=255)                  caccacACGCCTCTTACGAGTGCTTCGAAGAACTTGTTTATCGCTCATCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAAtt                                                                                                                    <  2:478699/140‑1 (MQ=255)                   accacACGCCTCTTACGAGTGCTTCGAAGAACTTGTTTATCGCTCATCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTa                                                                                                                   <  1:768150/140‑1 (MQ=255)                     cacaCGCCTCTTACGAGTGCTTCGAAGAACTTGTTTATCGCTCATCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGt                                                                                                                 >  1:548158/1‑140 (MQ=255)                     cacaCGCCTCTTACGAGTGCTTCGAAGAACTTGTTTATCGCTCATCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGt                                                                                                                 <  1:250009/140‑1 (MQ=255)                          gCCTCTTACGAGTGCTTCGAAGAACTTGTTTATCGCTCATCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGt                                                                                                                 <  1:513569/135‑1 (MQ=255)                          gCCTCTTACGAGTGCTTCGAAGAACTTGTTTATCGCTCATCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGt                                                                                                                 >  2:513569/1‑135 (MQ=255)                          gCCTCTTACGAGTGCTTCGAAGAACTTGTTTATCGCTCATCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTa                                                                                                            >  2:892276/1‑140 (MQ=255)                          gCCTCTTACGAGTGCTTCGAAGAACTTGTTTATCGCTCATCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTa                                                                                                            >  1:351928/1‑140 (MQ=255)                          gCCTCTTACGAGTGCTTCGAAGAACTTGTTTATCGCTCATCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACAC‑TTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTaa                                                                                                           >  2:1048017/1‑140 (MQ=255)                           ccTCTTACGAGTGCTTCGAAGAACTTGTTTATCGCTCATCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTaa                                                                                                           <  1:102059/140‑1 (MQ=255)                             tctTACGAGTGCTTCGAAGAACTTGTTTATCGCTCATCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTaaaa                                                                                                         >  2:362637/1‑140 (MQ=255)                             tctTACGAGTGCTTCGAAGAACTTGTTTATCGCTCATCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTaaaa                                                                                                         >  2:416339/1‑140 (MQ=255)                                    aGTGCTTCGAAGAACTTGTTTATCGCTCATCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCaa                                                                                                  >  2:198691/1‑140 (MQ=255)                                     gTGCTTCGAAGAACTTGTTTATCGCTCATCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACCTCACGTTCAATTAGTCTGTAAAAACGTCaaa                                                                                                 >  1:117794/1‑140 (MQ=255)                                      tGCTTCGAAGAACTTGTTTATCGCTCATCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCaaaa                                                                                                >  1:340388/1‑140 (MQ=255)                                       gCTTCGAAGAACTTGTTTATCGCTCATCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCaaaaa                                                                                               <  2:48936/140‑1 (MQ=255)                                        cTTCGAAGAACTTGTTTATCGCTCATCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACGCTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAag                                                                                              <  1:892276/140‑1 (MQ=255)                                        cTTCGAAGAACTTGTTTATCGCTCATCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAag                                                                                              >  2:632438/1‑140 (MQ=255)                                        cTTCGAAGAACTTGTTTATCGCTCATCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAag                                                                                              >  2:1262348/1‑140 (MQ=255)                                         ttCGAAGAACTTGTTTATCGCTCATCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAaga                                                                                             >  1:1034540/1‑140 (MQ=255)                                         ttCGAAGAACTTGTTTATCGCTCATCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAaga                                                                                             >  1:1151467/1‑140 (MQ=255)                                         ttCGAAGAACTTGTTTATCGCTCATCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAaga                                                                                             >  2:336029/1‑140 (MQ=255)                                         ttCGAAGAACTTGTTTATCGCTCATCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAaga                                                                                             >  1:763839/1‑140 (MQ=255)                                           cGAAGAACTTGTTTATCGCTCATCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAgt                                                                                           >  1:650768/1‑140 (MQ=255)                                                  cTTGTTTATCGCTCATCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTAt                                                                                    <  1:362637/140‑1 (MQ=255)                                                     gTTTATCGCTCATCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCaaaaa                                                                                               <  1:476126/126‑1 (MQ=255)                                                     gTTTATCGCTCATCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCaaaaa                                                                                               >  2:476126/1‑126 (MQ=255)                                                     gTTTATCGCTCATCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATaaa                                                                                 <  1:261673/140‑1 (MQ=255)                                                     gTTTATCGCTCATCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATCaa                                                                                 <  2:548158/140‑1 (MQ=255)                                                     gTTTATCGCTCATCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATCaa                                                                                 <  2:1250155/140‑1 (MQ=255)                                                        tATCGCTCATCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATCAACag                                                                              <  2:516029/140‑1 (MQ=255)                                                           cGCTCATCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATCAACagaag                                                                           >  2:993553/1‑140 (MQ=255)                                                             cTCATCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATCAActttttga                                                                         <  1:1126100/140‑8 (MQ=255)                                                              tCATCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCCAACAATTTTGCCTACACTTTTATCGCTTGCACGCTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATCAACAGAAGAAt                                                                        <  2:488487/140‑1 (MQ=255)                                                              tCATCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATCAACAGAAGAAt                                                                        <  2:989578/140‑1 (MQ=255)                                                                aTCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATCAACAGAAGAATgg                                                                      <  1:860279/140‑1 (MQ=255)                                                                aTCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATCAACAGAAGAATgg                                                                      <  1:993553/140‑1 (MQ=255)                                                                aTCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATCAACAGAAGAATgg                                                                      >  1:180804/1‑140 (MQ=255)                                                                aTCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAACTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATCAACAGAAGAATgg                                                                      >  2:1282434/1‑140 (MQ=255)                                                                     cgCTGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATCAACAGAAGAATGGAGGTc                                                                 <  2:276578/140‑1 (MQ=255)                                                                        tGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATTAACAGAAGAATGGAGGTCTGa                                                              <  2:340388/140‑1 (MQ=255)                                                                        tGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATCAACAGAAGAATGGAGGTCTGa                                                              >  2:338967/1‑140 (MQ=255)                                                                        tGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATCAACAGAAGAATGGAGGTCTGa                                                              >  1:1165262/1‑140 (MQ=255)                                                                          cGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATCAACAGAAGAATGGTGGTCTGACa                                                            >  2:1276184/1‑140 (MQ=255)                                                                          cGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATCAACAGAAGAATGGAGGTCTGa                                                              <  2:259168/138‑1 (MQ=255)                                                                          cGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATCAACAGAAGAATGGAGGTCTGa                                                              >  1:259168/1‑138 (MQ=255)                                                                          cGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATCAACAGAAGAATGGAGGTCTGACa                                                            >  1:587883/1‑140 (MQ=255)                                                                            tGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATCAACAGAAGAATGGAGGTCTGACAGa                                                          >  1:597031/1‑140 (MQ=255)                                                                             ggCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATCAACAGAAGAATGGAGGTCTGACAGAt                                                         <  2:1034540/140‑1 (MQ=255)                                                                             ggCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATCAACAGAAGAATGGAGGTCTGACAGAt                                                         <  2:1250560/140‑1 (MQ=255)                                                                             ggCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATCAACAGAAGAATGGAGGTCTGACAGAt                                                         <  2:351928/140‑1 (MQ=255)                                                                               cgcACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATCAACAGAAGAATGGAGGTCTGACAGAtag                                                       >  1:609785/1‑140 (MQ=255)                                                                               cgcACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATCAACAGAAGAATGGAGGTCTGACAGAtag                                                       >  1:1281099/1‑140 (MQ=255)                                                                               cgcACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATCAACAGAAGAATGGAGGTCTGACAGAtag                                                       >  1:52818/1‑140 (MQ=255)                                                                                gcACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATCAACAGAAGAATGGAGGTCTGACAGAtagt                                                      >  2:72427/1‑140 (MQ=255)                                                                                    atatTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATCAACAGAAGAATGGAGGTCTGACAGATAgtagta                                                  <  2:180804/140‑1 (MQ=255)                                                                                              cTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATCAACAGAAGAATGGAGGTCTGACAGATAGTAGTAATGCaaaaaa                                        >  1:829857/1‑140 (MQ=255)                                                                                              cTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATCAACAGAAGAATGGAGGTCTGACAGATAGTAGTAATGCaaaaaa                                        >  2:249915/1‑140 (MQ=255)                                                                                               tGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATCAACAGAAGAATGGAGGTCTGACAGATAGTAGTAATGCaaaaaaa                                       >  2:225445/1‑140 (MQ=255)                                                                                               tGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATCAACAGAAGAATGGAGGTCTGACAGATAGTAGTAATGCaaaaaaa                                       >  2:264917/1‑140 (MQ=255)                                                                                                gagaCTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATCAACAGAAGAATGGAGGTCTGACAGATAGTAGTAATGCAAAAAAAt                                      >  2:720368/1‑140 (MQ=255)                                                                                                 agaCTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATCAACAGAAGAATGGAGGTCTGACAGATAGTAGTAATGCAAAAAAATg                                     <  2:609785/140‑1 (MQ=255)                                                                                                 agaCTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATCAACAGAAGAATGGAGGTCTGACAGATAGTAGTAATGCAAAAAAATg                                     <  1:632438/140‑1 (MQ=255)                                                                                                 agaCTTATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACCTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATCAACAGAAGAATGGAGGTCTGACAGATAGTAGTAATGCAAAAAAATg                                     <  2:117794/140‑1 (MQ=255)                                                                                                  gaCTTATAAGTCAAACAATTTTTCCTACAC‑TTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATCAACAGAAGAATGGAGGTCTGACAGATAGTAGTAATGCAAAAAAATGga                                   <  1:1048017/140‑1 (MQ=255)                                                                                                     ttATAAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATCAACAGAAGAATGGAGGTCTGACAGATAGTAGTAATGCAAAAAAATGgaga                                 >  2:1155036/1‑140 (MQ=255)                                                                                                       ataAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATCAACAGAAGAATGGAGGTCTGACAGATAGTAGTAATGCAAAAAAATGGAGACt                               >  1:543932/1‑140 (MQ=255)                                                                                                       ataAGTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATCAACAGAAGAATGGAGGTCTGACAGATAGTAGTAATGCAAAAAAATGGAGACt                               <  1:264917/140‑1 (MQ=255)                                                                                                           gTCAAACAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATCAACAGAAGAATGGAGGTCTGACAGATAGTAGTAATGCAAAAAAATGGAGACTTAAg                           <  1:1155036/140‑1 (MQ=255)                                                                                                               aaCAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATCAACAGAAGAATGGAGGTCTGACAGATAGTAGTAATGCAAAAAAATGGAGACTTAAGTtga                       >  2:1280062/1‑140 (MQ=255)                                                                                                               aaCAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATCAACAGAAGAATGGAGGTCTGACAGATAGTAGTAATGCAAAAAAATGGAGACTTAAGTtga                       <  1:225445/140‑1 (MQ=255)                                                                                                               aaCAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATCAACAGAAGAATGGAGGTCTGACAGATAGTAGTAATGCAAAAAAATGGAGACTTAAGTtga                       >  2:551861/1‑140 (MQ=255)                                                                                                                aCAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATCAACAGAAGAATGGAGGTCTGACAGATAGTAGTAATGCAAAAAAATGGAGACTTAAGTtgaa                      <  1:249915/140‑1 (MQ=255)                                                                                                                aCAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATCAACAGAAGAATGGAGGTCTGACAGATAGTAGTAATGCAAAAAAATGGAGACTTAAGTtgaa                      <  1:192410/140‑1 (MQ=255)                                                                                                                aCAATTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATCAACAGAAGAATGGAGGTCTGACAGATAGTAGTAATGCAAAAAAATGGAGACTTAAGTtgaa                      <  1:437005/140‑1 (MQ=255)                                                                                                                  aaTTTTTCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATCAACAGAAGAATGGAGGTCTGACAGATAGTAGTAATGCAAAAAAATGGAGACTTAAGTtgaatg                    <  2:1253843/140‑1 (MQ=255)                                                                                                                    tttttCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATCAACAGAAGAATGGAGGTCTGACAGATAGTAGTAATGCAAAAAAATGGAGACTTAAGTtgaatgaa                  <  2:543932/140‑1 (MQ=255)                                                                                                                     ttttCCTACACTTTTATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATCAACAGAAGAATGGAGGTCTGACAGATAGTAGTAATGCAAAAAAATGGAGACTTAAGTTGAATGAAc                 <  1:338967/140‑1 (MQ=255)                                                                                                                                ttttATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATCAACAGAAGAATGGAGGTCTGACAGATAGTAGTAATGCAAAAAAATGGAGACTTAAGTTGAATGAACGGGAGTAAAGc      <  1:149595/140‑1 (MQ=255)                                                                                                                                  ttATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATCAACAGAAGAATGGAGGTCTGACAGATAGTAGTAATGCAAAAAAATGGAGACTTAAGTTGAATGAAc                 >  1:289949/1‑127 (MQ=255)                                                                                                                                  ttATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATCAACAGAAGAATGGAGGTCTGACAGATAGTAGTAATGCAAAAAAATGGAGACTTAAGTTGAATGAAc                 <  2:289949/127‑1 (MQ=255)                                                                                                                                  ttATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATCAACAGAAGAATGGAGGTCTGACAGATAGTAGTAATGCAAAAAAATGGAGACTTAAGTTGAATGAACGGGAGTAAAGCGa    <  1:1007059/140‑1 (MQ=255)                                                                                                                                  ttATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATCAACAGAAGAATGGAGGTCTGACAGATAGTAGTAATGCAAAAAAATGGAGACTTAAGTTGAATGAACGGGAGTAAAGCGa    <  2:1102034/140‑1 (MQ=255)                                                                                                                                  ttATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATCAACAGAAGAATGGAGGTCTGACAGATAGTAGTAATGCAAAAAAATGGAGACTTAAGTTGAATGAACGGGAGTAAAGCGa    <  1:1282434/140‑1 (MQ=255)                                                                                                                                  ttATCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATCAACAGAAGAATGGAGGTCTGACAGATAGTAGTAATGCAAAAAAATGGAGACTTAAGTTGAATGAACGGGAGTAAAGCGa    <  1:1262348/140‑1 (MQ=255)                                                                                                                                    aTCGCTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATCAACAGAAGAATGGAGGTCTGACAGATAGTAGTAATGCAAAAAAATGGAGACTTAAGTTGAATGAACGGGAGTAAAGCGaaa  <  2:1165262/140‑1 (MQ=255)                                                                                                                                        |                                                                                                                                        CAGCCTCTCGGCCACCTCACCACACGCCTCTTACGAGTGCTTCGAAGAACTTGTTTATCGCTCATCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGTTTGCACACTTCACGTTCAATTAGTCTGTAAAAACGTCAAAAAGAGTGTTTTATCAACAGAAGAATGGAGGTCTGACAGATAGTAGTAATGCAAAAAAATGGAGACTTAAGTTGAATGAACGGGAGTAAAGCGAAA  >  NC_000913/2818625‑2818895

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑