Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,428,558	T→C	noncoding (205/1542 nt)	rrsD ←	16S ribosomal RNA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,428,558	0	T	C	100.0%	184.1 / NA	69	noncoding (205/1542 nt)	rrsD	16S ribosomal RNA
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (33/36);  total (33/36)

GGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCAAGCTGTTTCC  >  NC_000913/3428421‑3428688                                                                                                                                          |                                                                                                                                   ggAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGccc                                                                                                                                  <  1:337919/140‑1 (MQ=17)   aGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGCcccc                                                                                                                                <  1:587148/140‑1 (MQ=17)     tCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGCCCCCct                                                                                                                              >  2:246156/1‑140 (MQ=17)      cTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGCCCCCctc                                                                                                                             >  2:518262/1‑140 (MQ=17)       tGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGCCCCCctct                                                                                                                            >  2:851492/1‑140 (MQ=17)       tGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGCCCCCctct                                                                                                                            >  1:280295/1‑140 (MQ=17)              tgtCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGcccc                                                                                                                                 >  2:419290/1‑128 (MQ=17)              tgtCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGcccc                                                                                                                                 <  1:419290/128‑1 (MQ=17)              tgtCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGCTCCCCTCTTTGGTCt                                                                                                                     >  1:390093/1‑140 (MQ=17)                 ctcAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGCCCCCCTCTTTGGTCTTGc                                                                                                                  <  1:468513/140‑1 (MQ=17)                     gTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGCCCCCCTCTTTGGTCTTGCGACg                                                                                                              <  2:382451/140‑1 (MQ=18)                       tCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGCCCCCCTCTTTGGTCTTGCGACGtt                                                                                                            <  1:288262/140‑1 (MQ=21)                         cAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGCCCCCCTCTTTGGTCTTGCGACGTTAt                                                                                                          <  1:74617/140‑1 (MQ=21)                          aGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATGCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGCCCCCCTCTTTGGTCTTGCGACGTTATg                                                                                                         <  1:753307/140‑1 (MQ=25)                          aGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGCTCCCCTCTTTGGTCTTGCGACGTTATg                                                                                                         <  2:390093/140‑1 (MQ=255)                          aGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGCCCCCCTCTTTGGTCTTGCGACGTTATg                                                                                                         <  2:712697/140‑1 (MQ=21)                          aGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGCCCCCCTCTTTGGTCTTGCGACGTTATg                                                                                                         <  2:348861/140‑1 (MQ=25)                          aGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGCCCCCCTCTTTGGTCTTGCGACGTTATg                                                                                                         <  2:280295/140‑1 (MQ=21)                            tgtgGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGCCCCCCTCTTTGGTCTTGCGACGTTATGCg                                                                                                       <  2:700370/140‑1 (MQ=25)                            tgtgGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGCCCCCCTCTTTGGTCTTGCGACGTTATGCg                                                                                                       <  1:518262/140‑1 (MQ=25)                                gCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGCCCCCCTCTTTGGTCTTGCGACGTTATGCGGTAt                                                                                                   >  1:919143/1‑140 (MQ=21)                                gCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGCCCCCCTCTTTGGTCTTGCGACGTTATGCGGTAt                                                                                                   >  1:147787/1‑140 (MQ=21)                                        tCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGCCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTAcc                                                                                           <  1:851492/140‑1 (MQ=25)                                         ccTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGCCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCg                                                                                          >  1:314101/1‑140 (MQ=21)                                             tcAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGCCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTc                                                                                      <  1:246156/140‑1 (MQ=25)                                              cAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGCCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTcc                                                                                     <  2:734836/140‑1 (MQ=25)                                               aGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGCCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTAcc                                                                                           >  2:713590/1‑133 (MQ=21)                                               aGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGCCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTAcc                                                                                           <  1:713590/133‑1 (MQ=25)                                               aGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGCCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCa                                                                                    <  2:789080/140‑1 (MQ=25)                                               aGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGCCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCa                                                                                    >  1:789080/1‑140 (MQ=21)                                                    aGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGCCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCagtagt                                                                               <  2:988064/140‑1 (MQ=25)                                                     gCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGCCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGtt                                                                              >  2:16200/1‑140 (MQ=21)                                                      cTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGCCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCt                                                                                              >  2:584189/1‑123 (MQ=25)                                                      cTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGCCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCt                                                                                              <  1:584189/123‑1 (MQ=25)                                                           gATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGCCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATcccc                                                                        <  2:314101/140‑1 (MQ=21)                                                           gATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGCCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATcccc                                                                        <  1:655695/140‑1 (MQ=21)                                                                tcgCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGCCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCa                                                                   >  1:408484/1‑140 (MQ=21)                                                                   ccTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGCCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCa                                                                   >  1:503925/1‑137 (MQ=21)                                                                   ccTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGCCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCa                                                                   <  2:503925/137‑1 (MQ=21)                                                                   ccTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGCCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCa                                                                <  2:408484/140‑1 (MQ=21)                                                                       ggTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGCCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCa                                                            <  1:16200/140‑1 (MQ=21)                                                                       ggTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGCCCCCCTATTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCa                                                            >  2:822460/1‑140 (MQ=21)                                                                              cGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGCCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGTTTccc                                                     <  2:312473/140‑1 (MQ=37)                                                                                ttACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGCCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGTTTCCCAg                                                   >  1:753912/1‑140 (MQ=37)                                                                                ttACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGCCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGTTTCCCAg                                                   >  1:738826/1‑140 (MQ=37)                                                                                ttACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGCCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGTTTCCCAg                                                   >  1:971449/1‑140 (MQ=37)                                                                                 tACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGCCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGTTTCCCAGa                                                  <  1:523572/140‑1 (MQ=37)                                                                                        ccaACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGCCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGTTTCCCAGACATTACt                                           >  2:287879/1‑140 (MQ=37)                                                                                                   aTCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGCCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGTTTCCCAGACa                                                <  1:574842/124‑1 (MQ=17)                                                                                                   aTCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGCCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGTTTCCCAGACa                                                >  2:574842/1‑124 (MQ=18)                                                                                                   aTCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGCCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGTTTCCCAGACATTACTCACCCGTCCGc                                <  2:919143/140‑1 (MQ=17)                                                                                                   aTCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGCCCCCCTCTTTGGTCTTGAGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGTTTCCCAGACATTACTCAccc                                      <  1:690877/134‑1 (MQ=17)                                                                                                   aTCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGCCCCCCTCTTTGGTCTTGAGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGTTTCCCAGACATTACTCAccc                                      >  2:690877/1‑134 (MQ=17)                                                                                                    tCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGCCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGTTTCCCAGACATTACTCACCCGTCCGcc                               >  1:23565/1‑140 (MQ=17)                                                                                                          cTGGGCACATCCGATGGCAAGAGGCCCGAGGGCCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGTTTCCCAGACATTACt                                           >  2:948734/1‑122 (MQ=17)                                                                                                          cTGGGCACATCCGATGGCAAGAGGCCCGAGGGCCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGTTTCCCAGACATTACt                                           <  1:948734/122‑1 (MQ=17)                                                                                                             ggCACATCCGATGGCAAGAGGCCCGAGGGCCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAg                      >  2:62754/1‑140 (MQ=18)                                                                                                             ggCACATCCGATGGCAAGAGGCCCGAGGGCCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAg                      >  1:182552/1‑140 (MQ=18)                                                                                                                 caTCCGATGGCAAGAGGCCCGAGGGCCCCCCTTTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTACCCCCCTCCACCAGGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGaa                  <  2:753912/140‑1 (MQ=255)                                                                                                                 caTCCGATGGCAAGAGGCCCGAGGGCCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGaa                  <  2:971449/140‑1 (MQ=21)                                                                                                                  aTCCGATGGCAAGAGGCCCGAGGGCCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCg                    <  2:214335/137‑1 (MQ=18)                                                                                                                  aTCCGATGGCAAGAGGCCCGAGGGCCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCg                    >  1:214335/1‑137 (MQ=18)                                                                                                                   tCCGATGGCAAGAGGCCCGAGGGCCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAAc                >  2:179084/1‑140 (MQ=25)                                                                                                                            aaGAGGCCCGAGGGCCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCAAGCTg       >  1:339163/1‑140 (MQ=18)                                                                                                                            aaGAGGCCCGAGGGCCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCAAGCTg       <  1:62754/140‑1 (MQ=17)                                                                                                                              gagGCCCGAGGGCCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCAAGCTGtt     >  2:463619/1‑140 (MQ=17)                                                                                                                               agGCCCGAGGGCCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTCCCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCAAGCTGttt    >  2:23122/1‑140 (MQ=12)                                                                                                                               agGCCCGAGGGCCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCaa           >  2:140468/1‑133 (MQ=17)                                                                                                                               agGCCCGAGGGCCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCaa           <  1:140468/133‑1 (MQ=17)                                                                                                                                 gCCCGAGGGCCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCAAGCTGTTTcc  >  2:974073/1‑140 (MQ=17)                                                                                                                                      aGGGCCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCaa           >  2:835111/1‑126 (MQ=11)                                                                                                                                      aGGGCCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCaa           <  1:835111/126‑1 (MQ=14)                                                                                                                                          |                                                                                                                                   GGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCGTTACCCCACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAACAGCAAGCTGTTTCC  >  NC_000913/3428421‑3428688

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑