| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 838,498 | T→G | intergenic (‑42/+32) | ybiI ← / ← ybiX | zinc finger domain‑containing protein YbiI/PKHD‑type hydroxylase YbiX |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 838,498 | 0 | T | G | 98.3% | 225.2 / ‑4.4 | 60 | intergenic (‑42/+32) | ybiI/ybiX | zinc finger domain‑containing protein YbiI/PKHD‑type hydroxylase YbiX |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base G (28/31); total (28/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.49e-01 | |||||||||||
CGCGGAATTTCACCCCGAGCGCGGGCAATCGCATCTTCAATTGTACTGTTGATCTGTTCGTTGACGGCGTCATCGTTAGCCCAACCGGATGCCATATCGACCTCCCCATATCAATACTTGTACAGTTAAGTGTAGCTAATCCAGGGACGAACTCGGGCAGTTCAAGCATCAGATCTCCGACCATTCCCGCAGCAGATTATGATAAAGATTAAGCAGCGACAGGATCTCTTCACTTTCGCCGTAGCGGCTTTTCAGCGACTGAATATTGTTGTC > NC_000913/838362‑838634 | cgcgGAATTTCACCCCGAGCGCGGGCAATCGCATCTTCAATTGTACTGTTGATCTGTTCGTTGACGGCGTCATCGTTAGCCCAACCGGATGCCATATCGACCTCCCCATATCAATACTTGTACAGTTAAGTGTAGCGAAt > 1:824311/1‑140 (MQ=255) cgGAATTTCACCCCGAGCGCGGGCAATCGCATCTTCAATTGTACTGTTGATCTGTTCGTTGACGGCGTCATCGTTAGCCCAACCGGATGCCATATCGACCTCCCCATATCAATACTTGTACAGTTAAGTGTAGCGAATcc < 1:785833/140‑1 (MQ=255) tttCACCCCGAGCGCGGGCAATCGCATCTTCAATTGTACTGTTGATCTGTTCGTTGACGGCGTCATCGTTAGCCCAACCGGATGCCATATCGACCTCCCCATATCAATACTTGTACAGTTAAGTGTAGCGAATCCAGGGa < 2:373055/140‑1 (MQ=255) ccccGAGCGCGGGCAATCGCATCTTCAATTGTACTGTTGATCTGTTCGTTGACGGCGTCATCGTTAGCCCAACCGGATGCCATATCGACCTCCCCATATCAATACTTGTACAGTTAAGTGTAGCGAATCCAGGGACGAAc > 2:247677/1‑140 (MQ=255) ccccGAGCGCGGGCAATCGCATCTTCAATTGTACTGTTGATCTGTTCGTTGACGGCGTCATCGTTAGCCCAACCGGATGCCATATCGACCTCCCCATATCAATACTTGTACAGTTAAGTGTAGCGAATCCAGGGACGAAc > 2:372133/1‑140 (MQ=255) aGCGCGGGCAATCGCATCTTCAATTGTACTGTTGATCTGTTCGTTGACGGCGTCATCGTTAGCCCAACCGGATGCCATATCGACCTCCCCATATCAATACTTGTACAGTTAAGTGTAGCGAATCCAGGGACGAACTCggg < 2:824311/140‑1 (MQ=255) gggCAATCGCATCTTCAATTGTACTGTTGATCTGTTCGTTGACGGCGTCATCGTTAGCCCAACCGGATGCCATATCGACCTCCCCATATCAATACTTGTACAGTTAAGTGTAGCGAATCCAGGGACGAACTCGGGCAGtt < 2:353881/140‑1 (MQ=255) ggCAATCGCATCTTCAATTGTACTGTTGATCTGTTCGTTGACGGCGTCATCGTTAGCCCAACCGGATGCCATATCGACCTCCCCATATCAATACTTGTACAGTTAAGTGTAGCGAATCCAGGGACGAACTCGGGCAGTTc > 1:300836/1‑140 (MQ=255) ggCAATCGCATCTTCAATTGTACTGTTGATCTGTTCGTTGACGGCGTCATCGTTAGCCCAACCGGATGCCATATCGACCTCCCCATATCAATACTTGTACAGTTAAGTGTAGCGAATCCAGGGACGAACTCGGGCAGTTc > 1:962517/1‑140 (MQ=255) gCAATCGCATCTTCAATTGTACTGTTGATCTGTTCGTTGACGGCGTCATCGTTAGCCCAACCGGATGCCATATCGACCTCCCCATATCAATACTTGTACAGTTAAGTGTAGCGAATCCAGGGACGAACTCGGGCAGTTCa < 1:223922/140‑1 (MQ=255) tCAATTGTACTGTTGATCTGTTCGTTGACGGCGTCATCGTTAGCCCAACCGGATGCCATATCGACCTCCCCATATCAATACTTGTACAGTTAAGTGTAGCGAATCCAGGGACGAACTCGGGCAGTTCAAGCATCAGAtct < 2:300836/140‑1 (MQ=255) ttGTACTGTTGATCTGTTCGTTGACGGCGTCATCGTTAGCCCAACCGGATGCCATATCGACATCCCCATATCAATACTTGTACAGTTAAGTGAAGCGAATCCAGGGACGAACTCGGGCAGTTCAAGCATCAGATCTCCGa > 1:394055/1‑140 (MQ=255) gTACTGTTGATCTGTTCGTTGACGGCGTCATCGTTAGCCCAACCGGATGCCATATCGACCTCCCCATATCAATACTTGTACAGTTAAGTGTAGCGAATCCAGGGACGAACTCGGGCAGTTCAAGCATCAGATCTCCGAcc < 1:247677/140‑1 (MQ=255) gTACTGTTGATCTGTTCGTTGACGGCGTCATCGTTAGCCCAACCGGATGCCATATCGACCTCCCCATATCAATACTTGTACAGTTAAGTGTAGCGAATCCAGGGACGAACTCGGGCAGTTCAAGCATCAGATCTCCGAcc < 2:932849/140‑1 (MQ=255) gTACTGTTGATCTGTTCGTTGACGGCGTCATCGTTAGCCCAACCGGATGCCATATCGACCTCCCCATATCAATACTTGTACAGTTAAGTGTAGCGAATCCAGGGACGAACTCGGGCAGTTCAAGCATCAGATCTCCGAcc < 1:372133/140‑1 (MQ=255) gATCTGTTCGTTGACGGCGTCATCGTTAGCCCAACCGGATGCCATATCGACCTCCCCATATCAATACTTGTACAGTTAAGTGTAGCGAATCCAGGGACGAACTCGGGCAGTTCAAGCATCAGATCTCCGACCATTc > 1:55317/1‑136 (MQ=255) gATCTGTTCGTTGACGGCGTCATCGTTAGCCCAACCGGATGCCATATCGACCTCCCCATATCAATACTTGTACAGTTAAGTGTAGCGAATCCAGGGACGAACTCGGGCAGTTCAAGCATCAGATCTCCGACCATTc < 2:55317/136‑1 (MQ=255) tCTGTTCGTTGACGGCGTCATCGTTAGCCCAACCGGATGCCATATCGACCTCCCCATATCAATACTTGTACAGTTAAGTGTAGCGAATCCAGGGACGAACTCGGGCAGTTCAAGCATCAGATCTCCGACCATTCCCgcag < 1:931338/140‑1 (MQ=255) tCTGTTCGTTGACGGCGTCATCGTTAGCCCAACCGGATGCCATATCGACCTCCCCATATCAATACTTGTACAGTTAAGTGTAGCGAATCCAGGGACGAACTCGGGCAGTTCAAGCATCAGATCTCCGACCATTCCCgcag < 1:322939/140‑1 (MQ=255) cTGTTCGTTGACGGCGTCATCGTTAGCCCAACCGGATGCCATATCGACCTCCCCATATCAATACTTGTACAGTTAAGTGTAGCGAATCCAGGGACGAACTCGGGCAGTTCAAGCATCAGATCTCCGACCATTCCCgcagc > 2:303289/1‑140 (MQ=255) ttCGTTGTCGGCGTCATCGTTAGCCCAACCGGATGCCATATCGACCTCCCCATATCAATACTTGTACAGTTAAGTGTAGCGAATCCAGGGACGAACTCGGGCAGTTCAAGCATCAGATCTCCGACCATTCCCGCAGCAGa > 1:465865/1‑140 (MQ=255) ttCGTTGACGGCGTCATCGTTAGCCCAACCGGATGCCATATCGACCTCCCCATATCAATACTTGTACAGTTAAGTGTAGCGAATCCAGGGACGAACTCGGGCAGTTCAAGCATCAGATCTCCGACCATTCCCGCAGCAGa > 1:408585/1‑140 (MQ=255) tGACGGCGTCATCGTTAGCCCAACCGGATGCCATATCGACCTCCCCATATCAATACTTGTAGAGTTAAGTGTAGCGAATCCAGGGACGAACTCGGGCAGTTCAAGCATCAGATCTCCGACCATTCCCGCAGCAGATTATg > 2:577578/1‑140 (MQ=255) aCGGCGTCATCGTTAGCCCAACCGGATGCCATATCGACCTCCCCATATCAATACTTGTACAGTTAAGTGTAGCGAATCCAGGGACGAACTCGGGCAGTTCAAGCATCAGATCTCCGACCATTCCCGCAGCAGATTATGAt < 1:303289/140‑1 (MQ=255) aCGGCGTCATCGTTAGCCCAACCGGATGCCATATCGACCTCCCCATATCAATACTTGTACAGTTAAGTGTAGCGAATCCAGGGACGAACTCGGGCAGTTCAAGCATCAGATCTCCGACCATTCCCGCAGCAGATTATGAt < 1:20460/140‑1 (MQ=255) gCGTCATCGTTAGCCCAACCGGATGCCATATCGACCTCCCCATATCAATACTTGTACAGTTAAGTGTAGCGAATCCAGGGACGAACTCGGGCAGTTCAAGCATCAGATCTCCGACCATTCCCGCAGCAGATTATGATaaa > 1:502251/1‑140 (MQ=255) gCGTCATCGTTAGCCCAACCGGATGCCATATCGACCTCCCCATATCAATACTTGTACAGTTAAGTGTAGCGAATCCAGGGACGAACTCGGGCAGTTCAAGCATCAGATCTCCGACCATTCCCGCAGCAGATTATGATaaa > 1:920635/1‑140 (MQ=255) gTTAGCCCAACCGGATGCCATATCGACCTCCCCATATCAATACTTGTACAGTTAAGTGTAGCGAATCCAGGGACGAACTCGGGCAGTTCAAGCATCAGATCTCCGACCATTCCCGCAGCAGATTATGATAAAGATTAagc < 2:920635/140‑1 (MQ=255) ttAGCCCAACCGGATGCCATATCGACCTCCCCATATCAATACTTGTACAGTTAAGTGTAGCGAATCCAGGGACGAACTCGGGCAGTTCAAGCATCAGATCTCCGACCATTCCCGCAGCAGATTATGATAAAGATTAagca < 2:408585/140‑1 (MQ=255) ttAGCCCAACCGGATGCCATATCGACCTCCCCATATCAATACTTGTACAGTTAAGTGTAGCGAATCCAGGGACGAACTCGGGCAGTTCAAGCATCAGATCTCCGACCATTCCCGCAGCAGATTATGATAAAGATTAagca < 2:110132/140‑1 (MQ=255) aGCCCAACCGGATGCCATATCGACCTCCCCATATCAATACTTGTACAGTTAAGTGTAGCGAATCCAGGGACGAACTCGGGCAGTTCAAGCATCAGATCTCCGACCATTCCCGCAGCAGATTATGATAAAGATTAagcagc < 2:394055/140‑1 (MQ=255) aCCGGATGCCATATCGACCTCCCCATATCAATACTTGTACAGTTAAGTGTAGCGAATCCAGGGACGAACTCGGGCAGTTCAAGCATCAGATCTCCGACCATTCCCGCAGCAGATTATGATAAAGATTAAGCAGCGACAgg < 2:962517/140‑1 (MQ=255) ccGGATGCCATATCGACCTCCCCATATCAATACTTGTACAGTTAAGTGTAGCGAATCCAGGGACGAACTCGGGCAGTTCAAGCATCAGATCTCCGACCATTCCCGCAGCAGATTATGATAAAGATTAAGCAGCGACAGGa > 1:970345/1‑140 (MQ=255) cGGATGCCATATCGACCTCCCCATATCAATACTTGTACAGTTAAGTGTAGCGAATCCAGGGACGAACTCGGGCAGTTCAAGCATCAGATCTCCGACCATTCCCGCAGCAGATTATGATAAAGATTAAGCAGCGACAGGAt < 2:465865/140‑1 (MQ=255) gCCATATCGACCTCCCCATATCAATACTTGTACAGTTAAGTGTAGCGAATCCAGGGACGAACTCGGGCAGTTCAAGCATCAGATCTCCGACCATTCCCGCAGCAGATTATGATAAAGATTAAGCAGCGACAGGATCTCtt < 2:970345/140‑1 (MQ=255) ccATATCGACCTCCCCATATCAATACTTGTACAGTTAAGTGTAGCGAATCCAGGGACGAACTCGGGCAGTTCAAGCATCAGATCTCCGACCATTCCCGCAGCAGATTATGATAAAGATTAAGCAGCGACAGGATCTCTTc < 2:502251/140‑1 (MQ=255) cccATATCAATACTTGTACAGTTAAGTGTAGCGAATCCAGGGACGAACTCGGGCAGTTCAAGCATCAGATCTCCGACCATTCCCGCAGCAGATTATGATAAAGATTAAGCAGCGACAGGATCTCTTCACTTTCGCCGTAg > 1:530859/1‑140 (MQ=255) cATATCAATACTTGTACAGTTAAGTGTAGCGAATCCAGGGACGAACTCGGGCAGTTCAAGCATCAGATCTCCGACCATTCCCGCAGCAGATTATGATAAAGATTAAGCAGCGACAGGATCTCTTCACTTTCGCCGTAGCg > 1:633665/1‑140 (MQ=255) tCAATACTTGTACAGTTAAGTGTAGCGAATCCAGGGACGAACTCGGGCAGTTCAAGCATCAGATCTCCGACCATTCCCGCAGCAGATTATGATAAAGATTAAGCAGCGACAGGATCTCTTCACTTTCGCCGTAGCGGCtt < 1:366630/140‑1 (MQ=255) tACTTGTACAGTTAAGTGTAGCGAATCCAGGGACGAACTCGGGCAGTTCAAGCATCAGATCTCCGACCATTCCCGCAGCAGATTATGATAAAGATTAAGCAGCGACAGGATCTCTTCACTTTCGCCGTAGCGGCTTTTCa > 1:753503/1‑140 (MQ=255) aCTTGTACAGTTAAGTGTAGCTAATCCAGGGACGAACTCGGGCAGTTCAAGCATCAGATCTCCGACCATTCCCGCAGCAGATTATGATAAAGATTAAGCAGCGACAGGATCTCTTCACTTTCGCCGTAGCGGCTTTTCAg < 2:160061/140‑1 (MQ=255) tGTACAGTTAAGTGTAGCGAATCCAGGGACGAACTCGGGCAGTTCAAGCATCAGATCTCCGACCATTCCCGCAGCAGATTATGATAAAGATTAAGCAGCGACAGGATCTCTTCACTTTCGCCGTAGCGGCTTTTCAGCGa < 2:753503/140‑1 (MQ=255) gTACAGTTAAGTGTAGCGAATCCAGGGACGAACTCGGGCAGTTCAAGCATCAGATCTCCGACCATTCCCGCAGCAGATTATGATAAAGATTAAGCAGCGACAGGATCTCTTCACTTTCGCCGTAGCGGCTTTTCAGCGa < 2:529449/139‑1 (MQ=255) gTACAGTTAAGTGTAGCGAATCCAGGGACGAACTCGGGCAGTTCAAGCATCAGATCTCCGACCATTCCCGCAGCAGATTATGATAAAGATTAAGCAGCGACAGGATCTCTTCACTTTCGCCGTAGCGGCTTTTCAGCGa < 1:9510/139‑1 (MQ=255) gTACAGTTAAGTGTAGCGAATCCAGGGACGAACTCGGGCAGTTCAAGCATCAGATCTCCGACCATTCCCGCAGCAGATTATGATAAAGATTAAGCAGCGACAGGATCTCTTCACTTTCGCCGTAGCGGCTTTTCAGCGa > 2:9510/1‑139 (MQ=255) gTACAGTTAAGTGTAGCGAATCCAGGGACGAACTCGGGCAGTTCAAGCATCAGATCTCCGACCATTCCCGCAGCAGATTATGATAAAGATTAAGCAGCGACAGGATCTCTTCACTTTCGCCGTAGCGGCTTTTCAGCGa > 1:529449/1‑139 (MQ=255) gTACAGTTAAGTGTAGCGAATCCAGGGACGAACTCGGGCAGTTCAAGCATCAGATCTCCGACCATTCCCGCAGCAGATTATGATAAAGATTAAGCAGCGACAGGATCTCTTCACTTTCGCCGTAGCGGCTTTTCAGCGAc > 2:412808/1‑140 (MQ=255) gTACAGTTAAGTGTAGCGAATCCAGGGACGAACTCGGGCAGTTCAAGCATCAGATCTCCGACCATTCCCGCAGCAGATTATGATAAAGATTAAGCAGCGACAGGATCTCTTCACTTTCGCCGTAGCGGCTTTTCAGCGAc > 2:558049/1‑140 (MQ=255) gTACAGTTAAGTGTAGCGAATCCAGGGACGAACTCGGGCAGTTCAAGCATCAGATCTCCGACCATTCCCGCAGCAGATTATGATAAAGATTAAGCAGCGACAGGATCTCTTCACTTTCGCCGTAGCGGCTTTTCAGCGAc > 1:651487/1‑140 (MQ=255) gTACAGTTAAGTGTAGCGAATCCAGGGACGAACTCGGGCAGTTCAAGCATCAGATCTCCGACCATTCCCGCAGCAGATTATGATAAAGATTAAGCAGCGACAGGATCTCTTCACTTTCGCCGTAGCGGCTTTTCAGCGAc > 2:752807/1‑140 (MQ=255) tACAGTTAAGTGTAGCGAATCCAGGGACGAACTCGGGCAGTTCAAGCATCAGATCTCCGACCATTCCCGCAGCAGATTATGATAAAGATTAAGCAGCGACAGGATCTCTTCACTTTCGCCGTAGCGGCTTTTCAGCGACt > 1:578165/1‑140 (MQ=255) tACAGTTAAGTGTAGCGAATCCAGGGACGAACTCGGGCAGTTCAAGCATCAGATCTCCGACCATTCCCGCAGCAGATTATGATAAAGATTAAGCAGCGACAGGATCTCTTCACTTTCGCCGTAGCGGCTTTTCAGCGACt > 2:221450/1‑140 (MQ=255) cAGTTAAGTGTAGCGAATCCAGGGACGAACTCGGGCAGTTCAAGCATCAGATCTCCGACCATTCCCGCAGCAGATTATGATAAAGATTAAGCAGCGACAGGATCTCTTCACTTTCGCCGTAGCGGCTTTTCAGCGACTGa < 1:577578/140‑1 (MQ=255) aGTTAAGTGTAGCGAATCCAGGGACGAACTCGGGCAGTTCAAGCATCAGATCTCCGACCATTCCCGCAGCAGATTATGATAAAGATTAAGCAGCGACAGGATCTCTTCACTTTCGCCGTAGCGGCTTTTCAGCGACTGaa < 2:442564/140‑1 (MQ=255) aGTTAAGTGTAGCGAATCCAGGGACGAACTCGGGCAGTTCAAGCATCAGATCTCCGACCATTCCCGCAGCAGATTATGATAAAGATTAAGCAGCGACAGGATCTCTTCACTTTCGCCGTAGCGGCTTTTCAGCGACTGaa < 1:631899/140‑1 (MQ=255) ttAAGTGTAGCGAATCCAGGGACGAACTCGGGCAGTTCAAGCATCAGATCTCCGACCATTCCCGCAGCAGATTATGATAAAGATTAAGCAGCGACAGGATCTCTTCACTTTCGCCGTAGCGGCTTTTCAGCGACTGAata > 1:504963/1‑140 (MQ=255) ttAAGTGTAGCGAATCCAGGGACGAACTCGGGCAGTTCAAGCATCAGATCTCCGACCATTCCCGCAGCAGATTATGATAAAGATTAAGCAGCGACAGGATCTCTTCACTTTCGCCGTAGCGGCTTTTCAGCGACTGAata < 2:633665/140‑1 (MQ=255) tgtAGCGAATCCAGGGACGAACTCGGGCAGTTCAAGCATCAGATCTCCGACCATTCCCGCAGCAGATTATGATAAAGATTAAGCAGCGACAGGATCTCTTCACTTTCGCCGTAGCGGCTTTTCAGCGACTGAATAttgtt > 2:851667/1‑140 (MQ=255) tgtAGCGAATCCAGGGACGAACTCGGGCAGTTCAAGCATCAGATCTCCGACCATTCCCGCAGCAGATTATGATAAAGATTAAGCAGCGACAGGATCTCTTCACTTTCGCCGTAGCGGCTTTTCAGCGACTGAATAttgtt > 1:66468/1‑140 (MQ=255) aGCGAATCCAGGGACGAACTCGGGCAGTTCAAGCATCAGATCTCCGACCATTCCCGCAGCAGATTATGATAAAGATTAAGCAGCGACAGGATCTCTTCACTTTCGCCGTAGCGGCTTTTCAGCGACTGAATATTGTTGTc < 2:651487/140‑1 (MQ=255) | CGCGGAATTTCACCCCGAGCGCGGGCAATCGCATCTTCAATTGTACTGTTGATCTGTTCGTTGACGGCGTCATCGTTAGCCCAACCGGATGCCATATCGACCTCCCCATATCAATACTTGTACAGTTAAGTGTAGCTAATCCAGGGACGAACTCGGGCAGTTCAAGCATCAGATCTCCGACCATTCCCGCAGCAGATTATGATAAAGATTAAGCAGCGACAGGATCTCTTCACTTTCGCCGTAGCGGCTTTTCAGCGACTGAATATTGTTGTC > NC_000913/838362‑838634 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |