Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 3,067,079 IS1 (+) +9 bp coding (87‑95/897 nt) ygfI ← putative LysR‑type DNA‑binding transcriptional regulator YgfI

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 1050545NA (NA)85 (1.040) 58/274 0.2 100% noncoding (768/768 nt) IS1 repeat region
?NC_000913 3067079 = 0 (0.000)coding (95/897 nt) ygfI putative LysR‑type DNA‑binding transcriptional regulator YgfI
* ? NC_000913 = 1979270NA (NA)97 (1.180) 63/276 0.1 100% noncoding (1/768 nt) IS1 repeat region
?NC_000913 = 3067087 0 (0.000)coding (87/897 nt) ygfI putative LysR‑type DNA‑binding transcriptional regulator YgfI

Only 100 of 185 total aligned reads displayed.

AAACCGGGAACAGTTTTTGATACAGTTCCTGTCCGGCTTTATTGAGGCTGATATTATTATCTTTGCGGGTAAATAGCGTATAGCCAATTTGTTCTTCCAGCGCGGCAATGCTTTTACCAAATGGCGAAGCCGTCATATGGATTTTTTCTGCCGCCCGGGCAATATTATTGGTTTGCGCTAATAAAATGAAATTGCGCATCTTTTTCGAAATAAAAATGTCCATCCCCCTCCCCCGCATCCTTGTCCGCTTAACCGTTTCAGTCAGCCTATCCTT  >  NC_000913/3066951‑3067224
                                                                                                                                        |                                                                                                                                         
atctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCGTCATATgg                                                                                                                                        >  1:1187725‑M2/129‑140 (MQ=255)
   ccGGGAACAGTTTTTGATACAGTTCCTGTCCGGCTTTATTGAGGCTGATATTATTATCTTTGCGGGTAAATAGCGTATAGCCAATTTGTTCTTCCAGCGCGGCAATGCTTTTACCAAATGGCGAAGCCGTCATAggtgat                                                                                                                                     >  1:633148‑M2/1‑134 (MQ=255)
      ggAACAGTTTTTGATACAGTTCCTGTCCGGCTTTATTGAGGCTGATATTATTATCTTTGCGGGTAAATAGCGTATAGCCAATTTGTTCTTCCAGCGCGGCAATGCTTTTACCAAATGGCGAAGCCGTCATAggtgatgct                                                                                                                                  <  2:17313‑M2/140‑10 (MQ=255)
       gAACAGTTTTTGATACAGTTCCTGTCCGGCTTTATTGAGGCTGATATTATTATCTTTGCGGGTAAATAGCGTATAGCCAATTTGTTCTTCCAGCGCGGCAATGCTTTTACCAAATGGCGAAGCCGTCATAggtgatgctg                                                                                                                                 >  2:474894‑M2/1‑130 (MQ=255)
         agcacctggcacggctgggacggaagtcgctgccgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCGTCATATGGATTTTTTCt                                                                                                                               <  1:226779‑M2/21‑1 (MQ=255)
             tttttGATACAGTTCCTGTCCGGCTTTATTGAGGCTGATATTATTATCTTTGCGGGTAAATAGCGTATAGCCAATTTGTTCTTCCAGCGCGGCAATGCTTTTACCAAATGGCGAAGCCGTCATAggtgatgctgccaact                                                                                                                           <  1:793526‑M2/140‑17 (MQ=255)
               tttGATACAGTTCCTGTCCGGCTTTATTGAGGCTGATATTATTATCTTTGCGGGTAAATAGCGTATAGCCAATTTGTTCTTCCAGCGCGGCAATGCTTTTACCAAATGGCGAAGCCGTCATAggtgatgctgccaactta                                                                                                                         >  1:1132845‑M2/1‑122 (MQ=255)
               tggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCGTCATATGGATTTTTTCTgccgcc                                                                                                                         >  2:236023‑M2/114‑140 (MQ=255)
               tggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCGTCATATGGATTTTTTCTgccgcc                                                                                                                         >  1:314478‑M2/114‑140 (MQ=255)
                 gcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCGTCATATGGATTTTTTCTGCCGCCCg                                                                                                                       <  2:1187725‑M2/29‑1 (MQ=255)
                    tACAGTTCCTGTCCGGCTTTATTGAGGCTGATATTATTATCTTTGCGGGTAAATAGCGTATAGCCAATTTGTTCTTCCAGCGCGGCAATGCTTTTACCAAATGGCGAAGCCGTCATAggtgatgctgccaacttactgat                                                                                                                    >  2:1128501‑M2/1‑117 (MQ=255)
                    cggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCGTCATATGGATTTTTTCTGCCGCCCGGGc                                                                                                                    <  1:666060‑M2/32‑1 (MQ=255)
                    cggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCGTCATATGGATTTTTTCTGCCGCCCGGGc                                                                                                                    <  1:245596‑M2/32‑1 (MQ=255)
                     aCAGTTCCTGTCCGGCTTTATTGAGGCTGATATTATTATCTTTGCGGGTAAATAGCGTATAGCCAATTTGTTCTTCCAGCGCGGCAATGCTTTTACCAAATGGCGAAGCCGTCATAggtgatgctgccaacttactgatt                                                                                                                   >  2:1103823‑M2/1‑116 (MQ=255)
                      gctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCGTCATATGGATTTTTTCTGCCGCCCGGGCaa                                                                                                                  <  1:547801‑M2/34‑1 (MQ=255)
                      gctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCGTCATATGGATTTTTTCTGCCGCCCGGGCaa                                                                                                                  <  2:321021‑M2/34‑1 (MQ=255)
                      gctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCGTCATATGGATTTTTTCTGCCGCCCGGGCaa                                                                                                                  <  1:489466‑M2/34‑1 (MQ=255)
                       aGTTCCTGTCCGGCTTTATTGAGGCTGATATTATTATCTTTGCGGGTAAATAGCGTATAGCCAATTTGTTCTTCCAGCGCGGCAATGCTTTTACCAAATGGCGAAGCCGTCATAggtgatgctgccaacttactgattta                                                                                                                 <  2:88567‑M2/140‑27 (MQ=255)
                       aGTTCCTGTCCGGCTTTATTGAGGCTGATATTATTATCTTTGCGGGTAAATAGCGTATAGCCAATTTGTTCTTCCAGCGCGGCAATGCTTTTACCAAATGGCGAAGCCGTCATAggtgatgctgccaacttactgattta                                                                                                                 <  1:640384‑M2/140‑27 (MQ=255)
                       aGTTCCTGTCCGGCTTTATTGAGGCTGATATTATTATCTTTGCGGGTAAATAGCGTATAGCCAATTTGTTCTTCCAGCGCGGCAATGCTTTTACCAAATGGCGAAGCCGTCATAggtgatgctgccaacttactgattta                                                                                                                 >  1:623428‑M2/1‑114 (MQ=255)
                        tgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCGTCATATGGATTTTTTCTGCCGCCCGGGCAata                                                                                                                >  2:1066117‑M2/105‑140 (MQ=255)
                         ttCCTGTCCGGCTTTATTGAGGCTGATATTATTATCTTTGCGGGTAAATAGCGTATAGCCAATTTGTTCTTCCAGCGCGGCAATGCTTTTACCAAATGGCGAAGCCGTCATAggtgatgctgccaacttactgatttagt                                                                                                               <  2:779341‑M2/140‑29 (MQ=255)
                         ttCCTGTCCGGCTTTATTGAGGCTGATATTATTATCTTTGCGGGTAAATAGCGTATAGCCAATTTGTTCTTCCAGCGCGGCAATGCTTTTACCAAATGGCGAAGCCGTCATAggtgatgctgccaacttactgatttagt                                                                                                               <  2:51739‑M2/140‑29 (MQ=255)
                         ttCCTGTCCGGCTTTATTGAGGCTGATATTATTATCTTTGCGGGTAAATAGCGTATAGCCAATTTGTTCTTCCAGCGCGGCAATGCTTTTACCAAATGGCGAAGCCGTCATAggtgatgctgccaacttactgatt                                                                                                                   <  2:22931‑M2/136‑25 (MQ=255)
                           gacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCGTCATATGGATTTTTTCTGCCGCCCGGGCAAtatta                                                                                                             <  1:249646‑M2/39‑1 (MQ=255)
                               tCCGGCTTTATTGAGGCTGATATTATTATCTTTGCGGGTAAATAGCGTATAGCCAATTTGTTCTTCCAGCGCGGCAATGCTTTTACCAAATGGCGAAGCCGTCATAggtgatgctgccaacttactgatttagtgtatga                                                                                                         >  2:55335‑M2/1‑106 (MQ=255)
                                aagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCGTCATATGGATTTTTTCTGCCGCCCGGGCAATATTATTGGt                                                                                                        <  1:1038218‑M2/44‑1 (MQ=255)
                                aagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCGTCATATGGATTTTTTCTGCCGCCCGGGCAATATTATTGGt                                                                                                        <  1:1171259‑M2/44‑1 (MQ=255)
                                    cTTTATTGAGGCTGATATTATTATCTTTGCGGGTAAATAGCGTATAGCCAATTTGTTCTTCCAGCGCGGCAATGCTTTTACCAAATGGCGAAGCCGTCATAggtgatgctgccaacttactgatttagtgtatgatggtg                                                                                                    >  1:17313‑M2/1‑101 (MQ=255)
                                     gctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCGTCATATGGATTTTTTCTGCCGCCCGGGCAATATTATTGGTTTgcg                                                                                                   <  1:575080‑M2/49‑1 (MQ=255)
                                         tcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCGTCATATGGATTTTTTCTGCCGCCCGGGCAATATTATTGGTTTGCGCtaa                                                                                               <  2:588398‑M2/53‑1 (MQ=255)
                                          tGAGGCTGATATTATTATCTTTGCGGGTAAATAGCGTATAGCCAATTTGTTCTTCCAGCGCGGCAATGCTTTTACCAAATGGCGAAGCCGTCATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttg                                                                                              >  2:488147‑M2/1‑95 (MQ=255)
                                           gttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCGTCATATGGATTTTTTCTGCCGCCCGGGCAATATTATTGGTTTGCGCtaata                                                                                             <  1:581112‑M2/55‑1 (MQ=255)
                                            ttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCGTCATATGGATTTTTTCTGCCGCCCGGGCAATATTATTGGtt                                                                                                       <  1:799316‑M2/45‑1 (MQ=255)
                                            ttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCGTCATATGGATTTTTTCTGCCGCCCGGGCAATATTATTGGtt                                                                                                       >  2:799316‑M2/85‑129 (MQ=255)
                                            aGGCTGATATTATTATCTTTGCGGGTAAATAGCGTATAGCCAATTTGTTCTTCCAGCGCGGCAATGCTTTTACCAAATGGCGAAGCCGTCATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgag                                                                                            >  1:441226‑M2/1‑93 (MQ=255)
                                            aGGCTGATATTATTATCTTTGCGGGTAAATAGCGTATAGCCAATTTGTTCTTCCAGCGCGGCAATGCTTTTACCAAATGGCGAAGCCGTCATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgag                                                                                            <  1:1106099‑M2/140‑48 (MQ=255)
                                              gCTGATATTATTATCTTTGCGGGTAAATAGCGTATAGCCAATTTGTTCTTCCAGCGCGGCAATGCTTTTACCAAATGGCGAAGCCGTCATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggt                                                                                          <  2:316942‑M2/140‑50 (MQ=255)
                                              gCTGATATTATTATCTTTGCGGGTAAATAGCGTATAGCCAATTTGTTCTTCCAGCGCGGCAATGCTTTTACCAAATGGCGAAGCCGTCATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggt                                                                                          <  2:406046‑M2/140‑50 (MQ=255)
                                              ctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCGTCATATGGATTTTTTCTGCCGCCCGGGCAATATTATTGGTTTGCGCTAATaaaa                                                                                          <  1:292841‑M2/58‑1 (MQ=255)
                                               tcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCGTCATATGGATTTTTTCTGCCGCCCGGGCAATATTATTGGTTTGCGCTAATAAAAt                                                                                         >  1:1368688‑M2/82‑140 (MQ=255)
                                                 gATATTATTATCTTTGCGGGTAAATAGCGTATAGCCAATTTGTTCTTCCAGCGCGGCAATGCTTTTACCAAATGGCGAAGCCGTCATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgct                                                                                       >  2:640054‑M2/1‑88 (MQ=255)
                                                  atatTATTATCTTTGCGGGTAAATAGCGTATAGCCAATTTGTTCTTCCAGCGCGGCAATGCTTTTACCAAATGGCGAAGCCGTCATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctc                                                                                      <  1:1391162‑M2/140‑54 (MQ=255)
                                                   tattattatCTTTGCGGGTAAATAGCGTATAGCCAATTTGTTCTTCCAGCGCGGCAATGCTTTTACCAAATGGCGAAGCCGTCATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctcc                                                                                     <  1:753568‑M2/140‑55 (MQ=255)
                                                   tattattatCTTTGCGGGTAAATAGCGTATAGCCAATTTGTTCTTCCAGCGCGGCAATGCTTTTACCAAATGGCGAAGCCGTCATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctcc                                                                                     >  2:305343‑M2/1‑86 (MQ=255)
                                                      tattatCTTTGCGGGTAAATAGCGTATAGCCAATTTGTTCTTCCAGCGCGGCAATGCTTTTACCAAATGGCGAAGCCGTCATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagt                                                                                  >  1:47738‑M2/1‑83 (MQ=255)
                                                       attatCTTTGCGGGTAAATAGCGTATAGCCAATTTGTTCTTCCAGCGCGGCAATGCTTTTACCAAATGGCGAAGCCGTCATAggtgatgctgcgaacttactgatttagtgtatgatggtgtttttgag                                                                                            >  2:637770‑M2/1‑82 (MQ=255)
                                                         tatCTTTGCGGGTAAATAGCGTATAGCCAATTTGTTCTTCCAGCGCGGCAATGCTTTTACCAAATGGCGAAGCCGTCATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggc                                                                               >  1:779341‑M2/1‑80 (MQ=255)
                                                              ctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCGTCATATGGATTTTTTCTGCCGCCCGGGCAATATTATTGGTTTGCGCTAATAAAATGAAATTGCGCATCtt                                                                          >  1:285512‑M2/67‑140 (MQ=255)
                                                               tGCGGGTAAATAGCGTATAGCCAATTTGTTCTTCCAGCGCGGCAATGCTTTTACCAAATGGCGAAGCCGTCATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgt                                                                         <  2:432692‑M2/140‑67 (MQ=255)
                                                               tGCGGGTAAATAGCGTATAGCCAATTTGTTCTTCCAGCGCGGCAATGCTTTTACCAAATGGCGAAGCCGTCATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgt                                                                         <  2:78511‑M2/140‑67 (MQ=255)
                                                               tGCGGGTAAATAGCGTATAGCCAATTTGTTCTTCCAGCGCGGCAATGCTTTTACCAAATGGCGAAGCCGTCATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgt                                                                         <  2:828645‑M2/140‑67 (MQ=255)
                                                               tGCGGGTAAATAGCGTATAGCCAATTTGTTCTTCCAGCGCGGCAATGCTTTTACCAAATGGCGAAGCCGTCATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggctt                                                                             <  1:1155362‑M2/136‑63 (MQ=255)
                                                               tGCGGGTAAATAGCGTATAGCCAATTTGTTCTTCCAGCGCGGCAATGCTTTTACCAAATGGCGAAGCCGTCATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggctt                                                                             >  2:1155362‑M2/1‑74 (MQ=255)
                                                                gCGGGTAAATAGCGTATAGCCAATTTGTTCTTCCAGCGCGGCAATGCTTTTACCAAATGGCGAAGCCGTCATAggtgatgctgccaacttactgatttagtgtatgatgttgtttttgaggtgctccagtggcttctgtt                                                                        <  2:198165‑M2/140‑68 (MQ=255)
                                                                 catgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCGTCATATGGATTTTTTCTGCCGCCCGGGCAATATTATTGGTTTGCGCTAATAAAATGAAATTGCGCATCttttt                                                                       <  1:1243675‑M2/77‑1 (MQ=255)
                                                                 cGGGTAAATAGCGTGTAGCCAATTTGTTCTTCCAGCGCGGCAATGCTTTTACCAAATGGCGAAGCCGTCATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgttt                                                                       <  2:908119‑M2/140‑69 (MQ=255)
                                                                  gggTAAATAGCGTATAGCCAATTTGTTCTTCCAGCGCGGCAATGCTTTTACCAAATGGCGAAGCCGTCATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttc                                                                      >  2:452873‑M2/1‑71 (MQ=255)
                                                                         tAGCGTATAGCCAATTTGTTCTTCCAGCGCGGCAATGCTTTTACCAAATGGCGAAGCCGTCATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagc                                                               >  2:1366132‑M2/1‑64 (MQ=255)
                                                                         agtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCGTCATATGGATTTTTTCTGCCGCCCGGGCAATATTATTGGTTTGCGCTAATAAAATGAAATTGCGCATCTTTTTCGAAATaa                                                               >  1:525912‑M2/56‑140 (MQ=255)
                                                                         agtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCGTCATATGGATTTTTTCTGCCGCCCGGGCAATATTATTGGTTTGCGCTAATAAAATGAAATTGCGCATCTTTTTCGAAATaa                                                               >  1:70063‑M2/56‑140 (MQ=255)
                                                                           tcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCGTCATATGGATTTTTTCTGCCGCCCGGGCAATATTATTGGTTTGCGCTAATAAAATGAAATTGCGCATCTTTTTCGAAATaaaa                                                             >  2:135266‑M2/54‑140 (MQ=255)
                                                                           gCGTATAGCCAATTTGTTCTTCCAGCGCGGCAATGCTTTTACCAAATGGCGAAGCCGTCATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctg                                                             <  2:1047098‑M2/140‑79 (MQ=255)
                                                                              tataGCCAATTTGTTCTTCCAGCGCGGCAATGCTTTTACCAAATGGCGAAGCCGTCATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtcc                                                          <  2:924855‑M2/140‑82 (MQ=255)
                                                                              tataGCCAATTTGTTCTTCCAGCGCGGCAATGCTTTTACCAAATGGCGAAGCCGTCATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtcc                                                          <  2:1235406‑M2/140‑82 (MQ=255)
                                                                               ataGCCAATTTGTTCTTCCAGCGCGGCAATGCTTTTACCAAATGGCGAAGCCGTCATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccc                                                         >  2:741822‑M2/1‑58 (MQ=255)
                                                                               ataGCCAATTTGTTCTTCCAGCGCGGCAATGCTTTTACCAAATGGCGAAGCCGTCATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccc                                                         <  1:1284641‑M2/140‑83 (MQ=255)
                                                                                 aGCCAATTTGTTCTTCCAGCGCGGCAATGCTTTTACCAAATGGCGAAGCCGTCATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctc                                                       >  1:151956‑M2/1‑56 (MQ=255)
                                                                                 aGCCAATTTGTTCTTCCAGCGCGGCAATGCTTTTACCAAATGGCGAAGCCGTCATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctc                                                       <  2:1153347‑M2/140‑85 (MQ=255)
                                                                                    cAATTTGTTCTTCCAGCGCGGCAATGCTTTTACCAAATGGCGAAGCCGTCATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctg                                                    >  1:1153347‑M2/1‑53 (MQ=255)
                                                                                     ttatctgaacataaaacactatcaataagttggagtcattaccGCCGTCATATGGATTTTTTCTGCCGCCCGGGCAATATTATTGGTTTGCGCTAATAAAATGAAATTGCGCATCTTTTTCGAAATAAAAATGTCCAtcc                                                   >  1:387758‑M2/44‑140 (MQ=255)
                                                                                      aTTTGTTCTTCCAGCGCGGCAATGCTTTTACCAAATGGCGAAGCCGTCATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgtt                                                  <  2:1052413‑M2/140‑90 (MQ=255)
                                                                                            aacataaaacactatcaataagttggagtcattaccGCCGTCATATGGATTTTTTCTGCCGCCCGGGCAATATTATTGGTTTGCGCTAATAAAATGAAATTGCGCATCTTTTTCGAAATAAAAATGTCCAtccccctccc                                            >  2:355065‑M2/37‑140 (MQ=255)
                                                                                            aacataaaacactatcaataagttggagtcattaccGCCGTCATATGGATTTTTTCTGCCGCCCGGGCAATATTATTGGTTTGCGCTAATAAAATGAAATTGCGCATCTTTTTCGAAATAAAAATGTCCAtccccctccc                                            >  1:861052‑M2/37‑140 (MQ=255)
                                                                                             tttccAGCGCGGCAATGCTTTTACCAAATGGCGAAGCCGTCATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctac                                           >  1:406046‑M2/2‑44 (MQ=255)
                                                                                              cataaaacactatcaataagttggagtcattaccGCCGTCATATGGATTTTTTCTGCCGCCCGGGCAATATTATTGGTTTGCGCTAATAAAATGAAATTGCGCATCTTTTTCGAAATAAAAATGTCCAtccccctccccc                                          <  1:45993‑M2/106‑1 (MQ=255)
                                                                                               tcCAGCGCGGCAATGCTTTTACCAAATGGCGAAGCCGTCATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactg                                         >  1:828645‑M2/1‑42 (MQ=255)
                                                                                               ataaaacactatcaataagttggagtcattaccGCCGTCATATGGATTTTTTCTGCCGCCCGGGCAATATTATTGGTTTGCGCTAATAAAATGAAATTGCGCATCTTTTTCGAAATAAAAATGTCCATCCCCCTCCCCCg                                         <  1:1344001‑M2/107‑1 (MQ=255)
                                                                                                 aaaacactatcaataagttggagtcattaccGCCGTCATATGGATTTTTTCTGCCGCCCGGGCAATATTATTGGTTTGCGCTAATAAAATGAAATTGCGCATCTTTTTCGAAATAAAAATGTCCATCCCCCTCCCCCGCa                                       >  1:584446‑M2/32‑140 (MQ=255)
                                                                                                         cAATGCTTTTACCAAATGGCGAAGCCGTCATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggt                               <  2:1018203‑M2/140‑109 (MQ=255)
                                                                                                          tcaataagttggagtcattaccGCCGTCATATGGATTTTTTCTGCCGCCCGGGCAATATTATTGGTTTGCGCTAATAAAATGAAATTGCGCATCTTTTTCGAAATAAAAATGTCCATCCCCCTCCCCCGCATCCTTGTcc                              >  1:795143‑M2/23‑140 (MQ=255)
                                                                                                                   tggagtcattaccGCCGTCATATGGATTTTTTCTGCCGCCCGGGCAATATTATTGGTTTGCGCTAATAAAATGAAATTGCGCATCTTTTTCGAAATAAAAATGTCCATCCCCCTCCCCCGCATCCTTGTCCGCTTAACCg                     <  2:824046‑M2/127‑1 (MQ=255)
                                                                                                                          attaccGCCGTCATATGGATTTTTTCTGCCGCCCGGGCAATATTATTGGTTTGCGCTAATAAAATGAAATTGCGCATCTTTTTCGAAATAAAAATGTCCATCCCCCTCCCCCGCATCCTTGTCCGCTTAACCGTTtcagt              <  1:899931‑M2/134‑1 (MQ=255)
                                                                                                                          attaccGCCGTCATATGGATTTTTTCTGCCGCCCGGGCAATATTATTGGTTTGCGCTAATAAAATGAAATTGCGCATCTTTTTCGAAATAAAAATGTCCATCCCCCTCCCCCGCATCCTTGTCCGCTTAACCGTTtcagt              >  1:1160509‑M2/7‑140 (MQ=255)
                                                                                                                          attaccGCCGTCATATGGATTTTTTCTGCCGCCCGGGCAATATTATTGGTTTGCGCTAATAAAATGAAATTGCGCATCTTTTTCGAAATAAAAATGTCCATCCCCCTCCCCCGCATCCTTGTCCGCTTAACCGTTtcagt              <  1:725894‑M2/134‑1 (MQ=255)
                                                                                                                          attaccGCCGTCATATGGATTTTTTCTGCCGCCCGGGCAATATTATTGGTTTGCGCTAATAAAATGAAATTGCGCATCTTTTTCGAAATAAAAATGTCCATCCCCCTCCCCCGCATCCTTGTCCGCTTAACCGTTtcagt              <  2:1282823‑M2/134‑1 (MQ=255)
                                                                                                                          attaccGCCGTCATATGGATTTTTTCTGCCGCCCGGGCAATATTATTGGTTTGCGCTAATAAAATGAAATTGCGCATCTTTTTCGAAATAAAAATGTCCATCCCCCTCCCCCGCATCCTTGTCCGCTTAACCGTTtcagt              <  2:379544‑M2/134‑1 (MQ=255)
                                                                                                                          attaccGCCGTCATATGGATTTTTTCTGCCGCCCGGGCAATATTATTGGTTTGCGCTAATAAAATGAAATTGCGCATCTTTTTCGAAATAAAAATGTCCATCCCCCTCCCCCGCATCCTTGTCCGCTTAACCGTTtcagt              <  1:1369175‑M2/134‑1 (MQ=255)
                                                                                                                           gCGAAGCCGTCATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcac             >  2:1151012‑M2/1‑14 (MQ=255)
                                                                                                                            taccGCCGTCATATGGATTTTTTCTGCCGCCCGGGCAATATTATTGGTTTGCGCTAATAAAATGAAATTGCGCATCTTTTTCGAAATAAAAATGTCCATCCCCCTCCCCCGCATCCTTGTCCGCTTAACCGTTtcagtca            >  2:720370‑M2/5‑140 (MQ=255)
                                                                                                                            taccGCCGTCATATGGATTTTTTCTGCCGCCCGGGCAATATTATTGGTTTGCGCTAATAAAATGAAATTGCGCATCTTTTTCGAAATAAAAATGTCCATCCCCCTCCCCCGCATCCTTGTCCGCTTAACCGTTtcag               <  1:842575‑M2/133‑1 (MQ=255)
                                                                                                                            taccGCCGTCATATGGATTTTTTCTGCCGCCCGGGCAATATTATTGGTTTGCGCTAATAAAATGAAATTGCGCATCTTTTTCGAAATAAAAATGTCCATCCCCCTCCCCCGCATCCTTGTCCGCTTAACCGTTtcag               >  2:842575‑M2/5‑137 (MQ=255)
                                                                                                                             gAAGCCGTCATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccg           >  1:1052413‑M2/1‑12 (MQ=255)
                                                                                                                                gCCGTCATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccg        >  1:646818‑M2/1‑9 (MQ=255)
                                                                                                                                   gTCATATGGATTTTTTCTGCCGCCCGGGCAATATTATTGGTTTGCGCTAATAAAATGAAATTGCGCATCTTTTTCGAAATAAAAATGTCCATCCCCCTCCCCCGCATCCTTGTCCGCTTAACCGTTTCAGTCAGCCTATc     <  2:525912/140‑1 (MQ=255)
                                                                                                                                    tCATAggtgatgctgccaacttactgatttagtgtatgatgttgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggaca    >  1:198165‑M2/1‑5 (MQ=255)
                                                                                                                                    tCATATGGATTTTTTCTGCCGCCCGGGCAATATTATTGGTTTGCGCTAATAAAATGAAATTGCGCATCTTTTTCGAAATAAAAATGTCCATCCCCCTCCCCCGCATCCTTGTCCGCTTAACCGTTtcag               <  1:947785/129‑1 (MQ=255)
                                                                                                                                    tCATATGGATTTTTTCTGCCGCCCGGGCAATATTATTGGTTTGCGCTAATAAAATGAAATTGCGCATCTTTTTCGAAATAAAAATGTCCATCCCCCTCCCCCGCATCCTTGTCCGCTTAACCGTTtcag               >  2:947785/1‑129 (MQ=255)
                                                                                                                                    tCATATGGATTTTTTCTGCCGCCCGGGCAATATTATTGGTTTGCGCTAATAAAATGAAATTGCGCATCTTTTTCGAAATAAAAATGTCCATCCCCCTCCCCCGCATCCTTGTCCGCTTAACCGTTTCAGTCAGCCTATcc    >  1:985482/1‑140 (MQ=255)
                                                                                                                                     cATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacat   >  1:1018203‑M2/1‑4 (MQ=255)
                                                                                                                                        |                                                                                                                                         
AAACCGGGAACAGTTTTTGATACAGTTCCTGTCCGGCTTTATTGAGGCTGATATTATTATCTTTGCGGGTAAATAGCGTATAGCCAATTTGTTCTTCCAGCGCGGCAATGCTTTTACCAAATGGCGAAGCCGTCATATGGATTTTTTCTGCCGCCCGGGCAATATTATTGGTTTGCGCTAATAAAATGAAATTGCGCATCTTTTTCGAAATAAAAATGTCCATCCCCCTCCCCCGCATCCTTGTCCGCTTAACCGTTTCAGTCAGCCTATCCTT  >  NC_000913/3066951‑3067224

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.