Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	753,125	0	T	A	30.6%	129.6 / 22.3	63	intergenic (‑330/+60)	ybgD/gltA	putative fimbrial protein YbgD/citrate synthase
Reads supporting (aligned to +/- strand):  ref base T (41/2);  new base A (0/19);  total (41/22)
Fisher's exact test for biased strand distribution p-value = 4.90e-14
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

GGGTTATAAATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAAC‑CCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGT  >  NC_000913/752986‑753264                                                                                                                                             |                                                                                                                                             gggTTATAAATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCatat                                                                                                                                              <  2:96157/140‑1 (MQ=255)      ataAATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATaaaaa                                                                                                                                         >  2:807560/1‑140 (MQ=255)      ataAATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATaaaaa                                                                                                                                         >  2:59672/1‑140 (MQ=255)            gCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAAc‑c                                                                                                                                  >  2:139841/1‑140 (MQ=255)            gCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAAc‑c                                                                                                                                  >  1:348571/1‑140 (MQ=255)            gCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAAc‑c                                                                                                                                  >  1:862514/1‑140 (MQ=255)             cGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAAc‑cc                                                                                                                                 >  2:1082557/1‑140 (MQ=255)             cGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAAc‑cc                                                                                                                                 >  2:224276/1‑140 (MQ=255)             cGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAAc‑cc                                                                                                                                 >  2:86703/1‑140 (MQ=255)               aCTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAAC‑CCGc                                                                                                                               >  1:299664/1‑140 (MQ=255)                 tACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAAC‑CCGCCa                                                                                                                             >  1:3809/1‑140 (MQ=255)                           tttttAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAAC‑CCGCCATATGAAcggc                                                                                                                   <  1:86703/140‑1 (MQ=255)                              ttAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAAC‑CCGCCATATGAACGGCggg                                                                                                                >  1:266863/1‑140 (MQ=255)                                   tGAAAGTATTGGGTTGCTGATATTTTGAGCTTTTTTATTTTTTTTAAATTTCTATATGGGTTTTTTAATGTATTTTTTTTTTACAA‑TTTTTTGTTTTTAGGCATAAAAAAACCAAC‑CCGCCATATGAACGGCGGGTTaaa                                                                                                           <  2:881701/140‑1 (MQ=255)                                    gAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAAC‑CCGCCATATGAACGGCGGGTTaaaa                                                                                                          >  1:679053/1‑140 (MQ=255)                                     aaaGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAAC‑CCGCCATATGAACGGCGGGTTtaaaa                                                                                                         >  2:920717/1‑139 (MQ=255)                                     aaaGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAAC‑CCGCCATATGAACGGCGGGTTaaaaa                                                                                                         >  2:965259/1‑139 (MQ=255)                                     aaaGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAAC‑CCGCCATATGAACGGCGGGTTAAAat                                                                                                         >  2:719990/1‑140 (MQ=255)                                     aaaGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAAC‑CCGCCATATGAACGGCGGGTTAAAat                                                                                                         >  2:528568/1‑140 (MQ=255)                                        tttttGGTTTGTTGATATTTTGAGCTTTTTTTTTTTTTTTAAATATTTATATAGGTCTGTTAATGGTTTTTATTTTTACAT‑TTTTTTGTTTTTAGGCATAAAAAAATCAAC‑CCGCCATATGAACGGCGGGTTAAAATAtt                                                                                                      <  2:872764/137‑1 (MQ=255)                                          tttGGTTTGTTAATAATTTGAGCTTTTTTTTTTTTTTTAAATATTAATATAGGTTTGTAAATGTTTTTTTTTTTAACAT‑TTTTTTTTTTTTAGTAATAAAAAAATCAAC‑CCGCCATATGAACGGCGGGTTAAAATATTTa                                                                                                    <  2:3809/139‑1 (MQ=255)                                           ttGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAAC‑CCGCCATATGAACGGCGGGTTAAAATATTTAc                                                                                                   >  1:455914/1‑140 (MQ=255)                                           tggggTTGCTGATAATTTGAGCTTTTTTATTTTTTTTAAATATCTATATGGGTTTTTTAAGGTTTTTTTTTTTTAAAT‑TTTTTTGTTTTTAGGCATAAAAAAATCAAC‑CCGCCATATGAACGGCGGGTTAAAATATTTAc                                                                                                   <  2:1104489/138‑1 (MQ=255)                                                ttGCTGATATTTTGAGTTTTTTTATTTTTTTAAAATATTTATATAGGTCTTTTAATGGATTTTATTTTTAAAA‑TTTTTTTTTTTTAGGAATAAAAAAACCAAC‑CCGCCATATGAACGGCGGGTTAAAATATTTACAACtt                                                                                              <  2:266863/140‑1 (MQ=255)                                                  gCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAAC‑CCGCCATATGAACGGCGGGTTAAAATATTTACAACTTaa                                                                                            >  2:143420/1‑139 (MQ=255)                                                                   ttCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAAC‑CCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGc                                                                           >  1:377011/1‑140 (MQ=255)                                                                    tCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAAC‑CCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCt                                                                          >  1:856948/1‑140 (MQ=255)                                                                     cTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAAC‑CCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCtt                                                                         >  2:859838/1‑140 (MQ=255)                                                                          ttttttAAATATCTATATAGGTTTTTTAATGGTTTTTATTTTTACAT‑TTTTTTGTGTTTAGGCATAAAAAAATCAAC‑CCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGatat                                                                    <  1:1139762/139‑1 (MQ=255)                                                                             tttAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAAC‑CCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGc                                                                 >  2:533810/1‑140 (MQ=255)                                                                             tttAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAAC‑CCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGc                                                                 >  1:1045237/1‑140 (MQ=255)                                                                             tttAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAAC‑CCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGc                                                                 >  1:867688/1‑140 (MQ=255)                                                                             tttAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAAC‑CCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGc                                                                 >  2:757878/1‑140 (MQ=255)                                                                             tttAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAAC‑CCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAACAATTAAACATTAACGCTTGATATCGc                                                                 >  1:404728/1‑140 (MQ=255)                                                                                       tatataGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAAC‑CCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAACAATCAACCATTAACGCTTGATATCGCTTTTAAAGTc                                                       >  2:976716/1‑140 (MQ=255)                                                                                           taGGTTTGTTAATGGTTTTTATTTTTAAAT‑TTTTTTGTTTTTAGGAATAAAAAAATCAAC‑CCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATAGCTTTTAAAGTCGCGt                                                   <  1:920717/140‑1 (MQ=255)                                                                                              gTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAAC‑CCGCCATATGAACGGCGGGTTAAAATATTTACAACTTATCAATCAACCATTAAAGCTTTATATCGCTTTTAAACACGCGtttt                                                >  2:1223116/1‑140 (MQ=255)                                                                                              gTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAAC‑CCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGtttt                                                >  2:1019097/1‑140 (MQ=255)                                                                                              gTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAAC‑CCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGtttt                                                >  1:1195312/1‑140 (MQ=255)                                                                                               tCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAAC‑CCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGttttt                                               >  1:961192/1‑140 (MQ=255)                                                                                               tCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAAC‑CCGCCATATGAACGGCGGGGTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGttttt                                               >  2:81009/1‑140 (MQ=255)                                                                                                tttttAATGTTTTTTATTTTTAAAT‑TTTTTTGTTTTTAGACATAAAAAAATCACC‑CCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTc                                              <  2:377011/137‑1 (MQ=255)                                                                                                ttGTTAATGGTTTTTTTTTTTACAA‑TTTTTTTTGTTTAGGCATAAAAAAATCAAC‑CCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTc                                              <  1:818155/139‑1 (MQ=255)                                                                                                 tGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAAC‑CCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCa                                             >  2:1026506/1‑140 (MQ=255)                                                                                                 tGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAAC‑CCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCa                                             >  1:343422/1‑140 (MQ=255)                                                                                                  tttAATGTTTTTTTTTTTTACAT‑TTTTTTTTTTTTAGGAATAAAAAAATCACC‑CCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCat                                            <  2:154650/139‑1 (MQ=255)                                                                                                  tttAATGTTTTTTTTTTTTAAAT‑TTTTTTGTGTTTAGGAATAAAAAAATCAAC‑CCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCat                                            <  2:455914/139‑1 (MQ=255)                                                                                                  tttAATGTATTTTATTTTTAAAT‑TTTTTTGTTTTTAGACATA‑AAAAAACAACACCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCat                                            <  2:240215/139‑1 (MQ=255)                                                                                                  tttAATGGATTTTTTTTTTACAT‑TTTTTTGTGTTTAGGAATAAAAAAACCAAC‑CCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCat                                            <  2:711862/139‑1 (MQ=255)                                                                                                  tttAATGAATTTTATTTTAAAAT‑TTTTTTTTTTTTATGAATAAAAAAAATATC‑CCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCat                                            <  2:299664/139‑1 (MQ=255)                                                                                                  gTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAAC‑CCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCat                                            <  1:1082557/140‑1 (MQ=255)                                                                                                  gTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATAAAAAAATCAAC‑CCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCat                                            <  1:59672/140‑1 (MQ=255)                                                                                                   ttAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAAC‑CCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTTAAAACGCGTGTTTtata                                           >  1:1384740/1‑140 (MQ=255)                                                                                                   ttAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAAC‑CCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCata                                           >  2:423851/1‑140 (MQ=255)                                                                                                   ttAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAAC‑CCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCata                                           >  2:169418/1‑140 (MQ=255)                                                                                                   ttAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAAC‑CCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGGTTTTCata                                           >  1:154650/1‑140 (MQ=255)                                                                                                    tAATGTATTTTTTTTTTAAAT‑TTTTTTGTTTTTAGGTATAAAAAAATAAAC‑CCG‑CATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATc                                         <  1:1292392/140‑1 (MQ=255)                                                                                                     agtGGTTTTTATTTTTAAAT‑TTTTTTGTGTTTGGGAATAAAAAAATCAAC‑CCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATc                                         <  1:1223116/138‑1 (MQ=255)                                                                                                     aagggATTTTTTTTTTAAAT‑TTTTTTGTTTTTAGGCATAAAAAAATCATA‑CCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATc                                         <  1:320824/137‑1 (MQ=255)                                                                                                     aaTGGATTTTTTTTTTACAT‑TTTTTTGTTTTTAGACATAAAAAAACCAAC‑CCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATc                                         <  2:867688/140‑1 (MQ=255)                                                                                                          tttttttttttAAAT‑TTTTTTGTGTTTAGGAAAAAAAAAATCACC‑CCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGta                                    <  2:642313/139‑1 (MQ=255)                                                                                                           ttttttttttAAAATTTTTTTGTTTTTAGAAATAAAAAAATCAAC‑CCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGta                                    <  2:343422/140‑1 (MQ=255)                                                                                                            ttttttttTAAAT‑TTTTTTTTTTTTAGGCATAAAAAAATCAAC‑CCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGtata                                  <  2:72982/140‑1 (MQ=255)                                                                                                             ttattttTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAAC‑CCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATAc                                 >  1:642313/1‑140 (MQ=255)                                                                                                                   ttACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAAC‑CCGCCATATGAACGGCGGGTTAAAAAATTTACAACTTAGCAATCAACCCTTTAAGCTTGATATCGCTTTTAAAATCGCGGTTTTTATATCCTGTATACAGcctg                           >  2:320824/1‑137 (MQ=255)                                                                                                                    tACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAAC‑CCGCCATATGAACGGCGGGTTAAAATATTTTAAAATTAGCAAACAACCATTAACGCTTGATATCGCTTTTAAAATCGCGTTTTTTATATCCTTTATACAGCTGAc                          >  2:741100/1‑140 (MQ=255)                                                                                                                              ttGTTTTTAGGCATAAAAAAATCACC‑CCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACggg                 <  2:348571/140‑1 (MQ=255)                                                                                                                               tgttTTTAGGCATAAAAAAATCAAC‑CCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGc                <  1:807560/140‑1 (MQ=255)                                                                                                                               tgttTTTAGGAATAAAAAAATCAAC‑CCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGc                <  2:961192/140‑1 (MQ=255)                                                                                                                               tgttTTTAGGAATAAAAAAACCAAC‑CCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGc                <  1:741100/140‑1 (MQ=255)                                                                                                                               tgttTTAAGGCATAAAAAAACCACC‑CCGCCATATGAACGGCGGGTTAAAATGTTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGc                <  2:862514/140‑1 (MQ=255)                                                                                                                                 tttttAGGAATAAAAAAATCAAC‑CCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCaa              <  2:856948/138‑1 (MQ=255)                                                                                                                                     tAGACATAAAAAAATCACC‑CCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCtt          <  2:409767/140‑1 (MQ=255)                                                                                                                                     aagaaatatAAAAATCACC‑CCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCtt          <  2:404728/135‑1 (MQ=255)                                                                                                                                          ataaAAAAATCAAC‑CCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATAc     <  1:84739/140‑1 (MQ=255)                                                                                                                                           tataAAAATCAAC‑CCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATAcc    >  2:972090/1‑140 (MQ=255)                                                                                                                                             taAAAATCAAC‑CCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGt  >  1:486043/1‑140 (MQ=255)                                                                                                                                             taAAAATCAAC‑CCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGt  >  2:283686/1‑140 (MQ=255)                                                                                                                                             taAAAATCAAC‑CCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAAACAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGt  >  2:727726/1‑140 (MQ=255)                                                                                                                                             |                                                                                                                                             GGGTTATAAATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAA‑TTTTTTGTGTTTAGGCATATAAAAATCAAC‑CCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGT  >  NC_000913/752986‑753264

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑