| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,628,649 | 0 | A | C | 25.0% | 127.0 / 14.4 | 60 | intergenic (+102/+206) | nadR/ettA | DNA‑binding transcriptional repressor/NMN adenylyltransferase NadR/energy‑dependent translational throttle protein EttA |
| Reads supporting (aligned to +/- strand): ref base A (35/10); new base C (0/15); total (35/25) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.14e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GGAACTGGTGCGGGAGATGATGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAA‑ACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACAGTTTTACA > NC_000913/4628511‑4628788 | ggAACTGGTGCGGGAGATGATGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAA‑Ac < 2:199791/140‑1 (MQ=255)ggAACTGGTGCGGGAGATGATGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAA‑Ac < 1:77079/140‑1 (MQ=255)ggAACTGGTGCGGGAGATGATGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAA‑Ac < 2:1002530/140‑1 (MQ=255) tGGTGCGGGAGATGATGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAA‑ACCTGCa < 2:88711/140‑1 (MQ=255) gTGCGGGAGATGATGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAA‑ACCTGCACg > 1:933134/1‑140 (MQ=255) gTGCGGGAGATGATGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAA‑ACCTGCACg > 1:1110776/1‑140 (MQ=255) gTGCGGGAGATGATGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAA‑ACCTGCACg > 2:1146321/1‑140 (MQ=255) ggAGATGATGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAA‑ACCTGCACGGGTGa > 2:160836/1‑140 (MQ=255) ggAGATGATGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAA‑ACCTGCACGGGTGa > 1:490238/1‑140 (MQ=255) atgatgGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAAAAAGGTTTGAAAAA‑ACCTGCACGGGTGAcccc > 1:752329/1‑139 (MQ=255) atgGGGGAGCAGAGATAACCGTGATAAAACTGCTAAAAGGGGAGTTATAAAAGGAGTTTTTTTGATGAGTTGAAACCCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAA‑ACCTGCAGGGGTGACCCGCCa < 2:733162/140‑1 (MQ=255) tgGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAA‑ACCTGCACGGGTGACCCGCCAc > 1:591709/1‑140 (MQ=255) agacaggagaTACCCGTGATAAAGCTGCTAAAAGGCGGGATATAAAATGAGTTTTTTTGATGAGTTAAAAGCCTTTCGGGAAGAGGCTGGCGAGATAAAACAAGTTTTGAAAAA‑ACGTGCCGGGGTGCCCCGCCACGaaa < 2:1309860/134‑1 (MQ=255) cAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAA‑ACCTGCACGGGTGACCCGCCACGAAATTGa > 1:839729/1‑140 (MQ=255) agagATAACCGTGATGAAACTGCTCAAAGGCGAGGTAAAAAATGAGTTTTTTTGATGAGTTAAAACCCTCTCTGGAAGAGGCTGTCGAAATAAAACAAGGTTTGAAAAA‑CCCTGCACGGGTGACCCGCCACGAAATTGAg < 2:419097/140‑1 (MQ=255) agaTAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGATTTTTTTTGATGAGTTGAAACCCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTAAAAAA‑CCCTGCACGGGTGACCCGCCACGAAATTGAGGa < 1:767504/140‑1 (MQ=255) aTAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAA‑ACCTGCACGGGTGACCCGCCACGAAATTGAGGATg > 2:283473/1‑140 (MQ=255) acccGTGATAAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTAAAACCCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTAAAAAA‑CCCTGCACGGGTGCCCCGCCACGAAATTGAGGATGCt < 2:1161562/138‑1 (MQ=255) aaCCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAACCCTCTCGGGAAGAGGTTGTCGAGATTAAACAAGGTTTGAAAAA‑CCCTGCCCGGGTGACCCGCCACGAAATTGAGGATGCt < 1:94164/140‑1 (MQ=255) cGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAA‑ACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAg > 2:1175201/1‑140 (MQ=255) cGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAA‑ACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAg > 2:1322814/1‑140 (MQ=255) gTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTGGAGATAAAACAAGGTTTGAAAAA‑CCCTGCACGGGTGCCCCGCCACGAAATTGAGGATGCTAAgg < 1:1146321/140‑1 (MQ=255) gTGATGAAACTGCTAAAAGGGGAGGTATAAAATGATTTTTTTTGATGAGTTAAAACCCTCTCGGGAAGAGGCTGTCGAGATAAAACAGGGTTTAAAAAA‑CCCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAgg < 2:356015/140‑1 (MQ=255) gTGATAAAACTGCTCAAAGGCGAGGTAAAAAATGAGTTTTTTTGATGAGTTGAAACCCTCTCTGGAAGAGGCTGTCGAGATAAAACAAGGTTTAAAAAA‑CCCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAgg < 1:1069468/140‑1 (MQ=255) gatgaAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAA‑ACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCtctgtct > 1:1309860/1‑134 (MQ=255) gatgaAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAA‑ACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCt > 1:841598/1‑140 (MQ=255) tgaAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAA‑ACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCtgt > 1:132753/1‑140 (MQ=255) aCTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAA‑ACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTa > 1:826405/1‑140 (MQ=255) cTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAA‑ACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAg > 1:120277/1‑140 (MQ=255) cTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAA‑ACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGAcc > 1:671377/1‑140 (MQ=255) aGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAA‑ACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGaaa > 2:1089844/1‑140 (MQ=255) aGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAA‑ACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGaaa > 1:769346/1‑140 (MQ=255) ggCGAGGTATAAAATGATTTTTTTTGATGAGTTAAAACCCTCTCGGGAAGAGGCTGTCGAGATAAAACAAGGTTTGAAAAA‑CCCTGCAGGGGTGCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAAc < 2:1107747/140‑1 (MQ=255) gCGAGGTAAAAAATGATTTTTTTTGATGAGTTAAAACCCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAA‑ACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACg < 2:1070903/140‑1 (MQ=255) gTAAAAAATGAGTTTTTTTGATGAGTTAAAACCCTCTCGGGAAGGGGCTGTCGAGATTAAACAAGGTTTAAAAAA‑CCCTGCAGGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGtt < 2:528445/140‑1 (MQ=255) taAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAA‑ACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCAc > 1:954891/1‑140 (MQ=255) aaTGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAA‑ACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCAcgcc > 1:1233883/1‑140 (MQ=255) attttttttGATGAGTTAAAACCCTCTGTGGAAGAGGCTGTCGAGATAAAACAAGTTTTGAAAAA‑CCCTGCAGGGGTGCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCAt < 2:132753/138‑1 (MQ=255) gTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAA‑ACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATc > 2:621752/1‑140 (MQ=255) gTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAA‑ACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATc > 1:531717/1‑140 (MQ=255) gTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAA‑ACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATc > 1:1082183/1‑140 (MQ=255) gTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAA‑ACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATc > 1:153089/1‑140 (MQ=255) tgatgaGTTAAAACCCTCTCGGGAAGGGGCTGTGGAGATAAAAAAAGTTTTAAAAAA‑CCCTGCAGGGGGGCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCAtt < 2:647780/140‑1 (MQ=255) tgatgaGTTAAAACCCTCTCGGGAAGAGGCTGTGGAGATAAAACAAGGTTTAAAAAA‑CCCTGCAGGGGTGCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCAtt < 2:769346/140‑1 (MQ=255) tgaGTTAAAACCCTCTCTGGAAGAGGCTGTCGAGATAAAACAAGGTTTAAAAAA‑ACCTGCACGGGTGCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCgg < 1:11063/140‑1 (MQ=255) tgaGTGAAAACCCTCTCTGGAAGAGTCTGTCGA‑ATTAAAAAAAGTTTCAAAAACCCCTGCCCGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCgg < 2:978243/140‑1 (MQ=255) ttGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAA‑ACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCt > 1:1049801/1‑140 (MQ=255) aaaacCCTCTCGGAAAGGGGCTGTCGAGATTAAACAAGGTTTGAAAAA‑CCCTGCACGGGTGCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCa < 1:448886/139‑1 (MQ=255) ctctctGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAA‑ACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCt > 2:41011/1‑140 (MQ=255) ctctGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAA‑ACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGa > 2:856323/1‑140 (MQ=255) tGGAAGAGGCTGTGGAGATTAAACAAGGTTTAAAAAA‑CCCTGCAGGGGGGCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGc < 1:1322814/140‑1 (MQ=38) gCTGTCGAGATTAAACAAGGTTTGAAAAA‑ACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTa > 2:861546/1‑140 (MQ=255) gCTGTCGAGATTAAACAAGGTTTGAAAAA‑ACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTa > 2:389257/1‑140 (MQ=255) ttGTCGAGATAAAACAGGGTTAAAAAAA‑CCCTGCGGGGGTGCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTAc < 2:490238/139‑1 (MQ=37) tCGAGATTAAACAAGGTTTGAAAAA‑ACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACcgc < 1:389257/140‑1 (MQ=255) tCGAGATTAAACAAGGTTTGAAAAA‑ACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACcgc > 1:355063/1‑140 (MQ=255) tCGAGATTAAACAAGGTTTGAAAAA‑ACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACcgc > 2:322672/1‑140 (MQ=255) cGAGATAAAACAGGGTTTAAAAAA‑CCCTGCAGGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACcgcg < 1:1267879/140‑1 (MQ=38) gagaTTAAAAAAGGTTTAAAAAA‑CCCTGCAGGGGTGCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGt < 1:160836/140‑1 (MQ=38) gagaTAAAACAGGGTTTAAAAAA‑CCCTGCGGGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGt < 2:175114/140‑1 (MQ=38) gagaTAAAAAAAGTTTTAAAAAA‑CCCTGCGGGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGt < 2:499659/140‑1 (MQ=38) gaaataaaaCACGGTTTAAAAAA‑CCGTACTCGGGTCACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGt < 1:1338366/134‑1 (MQ=37) tAAACAAGGTTTGAAAAA‑ACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTAt < 1:1089844/140‑1 (MQ=255) aaaaCAGGTTTTAAAAAA‑CCCTGCGGGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTAt < 2:963747/139‑1 (MQ=37) aaaCAAGTTTTAAAAAA‑CCCTGCCGGGGTGCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATc < 2:1233883/140‑1 (MQ=37) aCAAGGTTTGAAAAA‑ACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAg > 1:33335/1‑140 (MQ=255) ggttttAAAAAA‑CCCTGCACGGGTGCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGcc < 2:839729/137‑1 (MQ=255) ttttAAAAAA‑CCCTGCCGGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTa < 1:1008917/139‑1 (MQ=255) tttaaaaaaa‑cCCTGCAGGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTa < 2:826405/135‑1 (MQ=255) gTTTGAAAAA‑ACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTa < 1:856323/140‑1 (MQ=255) tttGAAAAA‑ACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTAc > 1:1061939/1‑140 (MQ=255) gAAAAA‑ACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACAgc > 1:963747/1‑139 (MQ=255) aaaaa‑cCCTGCAGGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTa < 2:1101157/135‑1 (MQ=255) aaaaa‑aCCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTa > 1:1101157/1‑135 (MQ=255) aCCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACAGTTTTACa > 2:51514/1‑140 (MQ=255) aCCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACAGTTTTACa < 1:41011/140‑1 (MQ=255) aCCTGAACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACAGTTTTACa > 1:388725/1‑140 (MQ=255) | GGAACTGGTGCGGGAGATGATGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAA‑ACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACAGTTTTACA > NC_000913/4628511‑4628788 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |