| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,389,602 | Δ30 bp | coding (673‑702/966 nt) | ycjG → | L‑Ala‑D/L‑Glu epimerase |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1389602 | 1389631 | 30 | 27 [0] | [0] 27 | ycjG | L‑Ala‑D/L‑Glu epimerase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1389601 | 0 (0.000) | 27 (0.820) | 22/276 | 0.4 | 100% | coding (672/966 nt) | ycjG | L‑Ala‑D/L‑Glu epimerase |
| ? | NC_000913 | 1389632 = | 0 (0.000) | coding (703/966 nt) | ycjG | L‑Ala‑D/L‑Glu epimerase | |||||
GCGTTGCCAGCTATTGGCGGATTTAGGCGTTGCGATGCTTGAACAACCGCTTCCTGCGCAGGACGATGCGGCGCTGGAGAATTTTATTCATCCGTTGCCGATTTGTGCTGATGAAAGTTGTCATACTCGTAGCAATTTGAAGGCGCTGAAAGGGCGCTATGAGATGGTTAATATTAAGCTCGATAAAACCGGGGGTCTGACGGAAGCGCTGGCGCTGGCGACTGAAGCGCGTGCACAAGGTTTCAGTCTGATGCTGGGCTGCA > NC_000913/1389493‑1389755 | tgaatcctggcgtgcagaagggttggcggcgcgttgccagctattggcggatttaggcgttgcgatgcttgaacaaccgcttcctgcgcaggacgatgtggcgctggagaattttattcatccgttgccgatttgtgcta > 2:5815‑M2/140‑140 (MQ=255) atcctggcgtgcagaagggttggcggcgcgttgccagctattggcggatttaggcgttgcgatgcttgaacaaccgcttcctgcgcaggacgatgtggcgctggagaattttattcatccgttgccgatttgtgctAAgg < 1:5815‑M2/4‑1 (MQ=255) tggcgtgcagaagggttggcggcgcgttgccagctattggcggatttaggcgttgcgatgcttgaacaaccgcttcctgcgcaggacgatgcggcgctggagaattttattcatccgttgccgatttgtgctAAGGCGCt > 2:222009‑M2/133‑140 (MQ=255) agaagggttggcggcgcgttgccagctattggcggatttaggcgttgcgatgcttgaacaaccgcttcctgcgcaggacgatgcggcgctggagaattttattcatccgttgccgatttgtgctAAGGCGCTGAAAGGgc < 1:341531‑M2/16‑1 (MQ=255) agaagggttggcggcgcgttgccagctattggcggatttaggcgttgcgatgcttgaacaaccgcttcctgcgcaggacgatgcggcgctggagaattttattcatccgttgccgatttgtgctAAGGCGCTGAAAGGgc < 1:381217‑M2/16‑1 (MQ=255) tggcggcgcgttgccagctattggcggatttaggcgttgcgatgcttgaacaaccgcttcctgcgcaggacgatgcggcgctggagaattttattcatccgttgccgatttgtgctAAGGCGCTGAAAGGGCGCTATgag < 2:386764‑M2/24‑1 (MQ=255) tggcggcgcgttgccagctattggcggatttaggcgttgcgatgcttgaacaaccgcttcctgcgcaggacgatgcggcgctggagaattttattcatccgttgccgatttgtgctAAGGCGCTGAAAGGGCGCTATgag < 2:27701‑M2/24‑1 (MQ=255) gcggcgcgttgccagctattggcggatttaggcgttgcgatgcttgaacaaccgcttcccgcgcaggacgatgcggcgctggagaattttattcatccgttgccgatttgtgctAAGGCGCTGAAAGGGCGCTATGAGAt < 2:300446‑M2/26‑1 (MQ=255) gcgcgttgccagctattggcggatttaggcgttgcgatgcttgaacaaccgcttcctgcgcaggacgatgcggcgctggagaattttattcatccgttgccgatttgtgctAAGGCGCTGAAAGGGCGCTATGAGATGGt < 1:217701‑M2/29‑1 (MQ=255) gcgcgttgccagctattggcggatttaggcgttgcgatgcttgaacaaccgcttcctgcgcaggacgatgcggcgctggagaattttattcatccgttgccgatttgtgctAAGGCGCTGAAAGGGCGCTATGAGATGGt < 1:369090‑M2/29‑1 (MQ=255) gcggatttaggcgttgcgatgcttgaacaaccgcttcctgcgcaggacgatgcggcgctggagaattttattcatccgttgccgatttgtgctAAGGCGCTGAAAGGGCGCTATGAGATGGTTAATATTAAGCTCGATaa > 1:283782‑M2/94‑140 (MQ=255) taggcgttgcgatgcttgaacaaccgcttcctgcgcaggacgatgcggcgctggagaattttattcatccgttgccgatttgtgctAAGGCGCTGAAAGGGCGCTATGAGATGGTTAATATTAAGCTCGATAAAACCggg < 2:283782‑M2/54‑1 (MQ=255) cgatgcttgaacaaccgcttcctgcgcaggacgatgcggcgctggagaattttattcatccgttgccgatttgtgctAAGGCGCTGAAAGGGCGCTATGATATGGTTAATATTAAGCTCGATAAAACCGGGGGTCTGACg > 1:389647‑M2/78‑140 (MQ=255) ccgcttcctgcgcaggacgatgcggcgctggagaattttattcatccgttgccgatttgtgctAAGGCGCTGAAAGGGCGCTATGAGATGGTTAATATTAAGCTCGATAAAACCGGGGGTCTGACGGAAgcgctggcgct < 2:19075‑M2/77‑1 (MQ=255) ccgcttcctgcgcaggacgatgcggcgctggagaattttattcatccgttgccgatttgtgctAAGGCGCTGAAAGGGCGCTATGAGATGGTTAATATTAAGCTCGATAAAACCGGGGGTCTGACGGAAgcgctggcgct < 2:431695‑M2/77‑1 (MQ=255) cgcttcctgcgcaggacgatgcggcgctggagaattttattcatccgttgccgatttgtgctAAGGCGCTGAAAGGGCGCTATGAGATGGTTAATATTAAGCTCGATAAAACCGGGGGTCTGACGGAAgcgctggcgctg > 1:264599‑M2/63‑140 (MQ=255) gcttcctgcgcaggacgatgcggcgctggagaattttattcatccgttgccgatttgtgctAAGGCGCTGAAAGGGCGCTATGATATGGTTAATATTAAGCTCGATAAAACCGGGGGTCTGACGGAAGcgctggcgctgg < 2:389647‑M2/79‑1 (MQ=255) gcttcctgcgcaggacgatgcggcgctggagaattttattcatccgttgccgatttgtgctAAGGCGCTGAAAGGGCGCTATGAGATGGTTAATATTAAGCTCGATAAAACCGGGGGTCTGACGGAAGcgctggcgctgg < 1:272916‑M2/79‑1 (MQ=255) cgcaggacgatgcggcgctggagaattttattcatccgttgccgatttgtgctAAGGCGCTGAAAGGGCGCTATGAGATGGTTAATATTAAGCTCGATAAAACCGGGGGTCTGACGGAAGCGCTGGCGCTGGCGACTGaa > 1:186194‑M2/54‑140 (MQ=255) atgcggcgctggagaattttattcatccgttgccgatttgtgctAAGGCGCTGAAAGGGCGCTATGAGATGGTTAATATTAAGCTCGATAAAACCGGGGGTCTGACGGAAGCGCTGGCGCTGGCGACTGAAGCGCGTGca < 1:222009‑M2/96‑1 (MQ=255) tgcggcgctggagaattttattcatccgttgccgatttgtgctAAGGCGCTGAAAGGGCGCTATGAGATGGTTAATATTAAGCTCGATAAAACCGGGGGTCTGACGGAAGCGCTGGCGCTGGCGACTGa < 2:371023‑M2/86‑1 (MQ=255) tgcggcgctggagaattttattcatccgttgccgatttgtgctAAGGCGCTGAAAGGGCGCTATGAGATGGTTAATATTAAGCTCGATAAAACCGGGGGTCTGACGGAAGCGCTGGCGCTGGCGACTGa > 1:371023‑M2/44‑129 (MQ=255) cgctggagaattttattcatccgttgccgatttgtgctAAGGCGCTGAAAGGGCGCTATGAGATGGTTAATATTAAGCTCGATAAAACCGGGGGTCTGACGGAAGCGCTGGCGCTGGCGACTGAAGCGCGTGcaca > 1:405806‑M2/39‑136 (MQ=255) cgctggagaattttattcatccgttgccgatttgtgctAAGGCGCTGAAAGGGCGCTATGAGATGGTTAATATTAAGCTCGATAAAACCGGGGGTCTGACGGAAGCGCTGGCGCTGGCGACTGAAGCGCGTGcaca < 2:405806‑M2/98‑1 (MQ=255) ttattcatccgttgccgatttgtgctAAGGCGCTGAAAGGGCGCTATGAGATGGTTAATATTAAGCTCGATAAAACCGGGGGTCTGACGGAAGCGCTGGCGCTGGCGACTGAAGCGCGTGCACAAGGTTTCAGTCTGATg < 2:529478‑M2/114‑1 (MQ=255) tgctAAGGCGCTGAAAGGGCGCTATGAGATGGTTAATATTAAGCTCGATAAAACCGGGGGTCTGACGGAAGCGCTGGCGCTGGCGACTGAAGCGCGTGCACAAGGTTTCAGTCTGATGCTGGGCTGCa > 1:465718‑M2/5‑128 (MQ=255) tgctAAGGCGCTGAAAGGGCGCTATGAGATGGTTAATATTAAGCTCGATAAAACCGGGGGTCTGACGGAAGCGCTGGCGCTGGCGACTGAAGCGCGTGCACAAGGTTTCAGTCTGATGCTGGGCTGCa < 2:465718‑M2/124‑1 (MQ=255) | GCGTTGCCAGCTATTGGCGGATTTAGGCGTTGCGATGCTTGAACAACCGCTTCCTGCGCAGGACGATGCGGCGCTGGAGAATTTTATTCATCCGTTGCCGATTTGTGCTGATGAAAGTTGTCATACTCGTAGCAATTTGAAGGCGCTGAAAGGGCGCTATGAGATGGTTAATATTAAGCTCGATAAAACCGGGGGTCTGACGGAAGCGCTGGCGCTGGCGACTGAAGCGCGTGCACAAGGTTTCAGTCTGATGCTGGGCTGCA > NC_000913/1389493‑1389755 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |