| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 349768 | NA (NA) | 36 (0.940) | 27/274 | 0.3 | NA | noncoding (17/35 nt) | other | REP25d |
| ? | NC_000913 | 349774 = | NA (NA) | noncoding (11/35 nt) | other | REP25d | |||||
TACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTC‑GGATAAGACGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/349638‑349768‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGA > NC_000913/349774‑349900 TACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTC‑GGATAAGACGCATCGCATCCGA > 1:620286/1‑140 CTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTC‑GGATAAGACGCATCGCATCCGACAACCGATGCCTGATG > 2:336612/1‑140 GTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTC‑GGATAAGACGCATCGCATCCGACAACCGATGCCTGATGCG < 1:336612/140‑1 TAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTC‑GGATAAGACGCATCGCATCCGACAACCGATGCCTGATGCGC > 2:173123/1‑140 TAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTC‑GGATAAGACGCATCGCATCCGACAACCGATGCCTGATGCGC > 2:424197/1‑140 CGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTC‑GGATAAGACGCATCGCATCCGACAAGCGATGCCTGATGCGCCGCTG > 2:213278/1‑140 CGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTC‑GGATAAGACGCATCGCATCCGACAACCGATGCCTGATGCGCCGCTG > 1:88938/1‑140 GATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTC‑GGATAAGACGCATCGCATCCGACAACCGATGCCTGATGCGCCGCTGAC > 1:530404/1‑140 AGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTC‑GGATAAGACGCATCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGA < 2:321342/140‑1 AGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTC‑GGATAAGACGCATCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGA < 2:538015/140‑1 ATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTC‑GGATAAGACGCATCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATC > 2:315905/1‑140 TGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTC‑GGATAAGACGCATCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCA < 1:645159/140‑1 TGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTC‑GGATAAGACGCATCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCA < 2:530404/140‑1 CATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTC‑GGATAAGACGCATCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACG < 2:368332/140‑1 CATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTC‑GGATAAGACGCATCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACG > 1:368332/1‑140 CATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTC‑GGATAAGACGCATCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACG < 1:315905/140‑1 ATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTC‑GGATAAGACGCATCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAAC > 2:95918/1‑140 ATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTC‑GGATAAGACGCATCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACG > 2:209301/1‑127 ATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTC‑GGATAAGACGCATCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACG < 1:209301/127‑1 CCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTC‑GGATAAGACGCATCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGT > 2:16342/1‑140 CCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTC‑GGATAAGACGCATCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGT < 1:424197/140‑1 CGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTC‑GGATAAGACGCATCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATA < 1:16342/140‑1 CTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGGATAAGACGCATCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAA > 2:82049/1‑140 CTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTC‑GGATAAGACGCATCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAG < 2:620286/140‑1 ACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTC‑GGATAAGACGCATCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGG < 1:536821/123‑1 ACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTC‑GGATAAGACGCATCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGG > 2:536821/1‑123 CAGGCCTACGGGGTGCACTGAACTGTAGGTC‑GGATAAGACGCATCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGC < 2:253311/140‑1 gtCTACGGGGTGCACTGAACTGTAGGTC‑GGATAAGACGCATCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCG < 1:312230/134‑1 GCCTACGGGGTGCACTGAACTGTAGGTC‑GGATAAGACGCATCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCG > 2:312230/1‑136 TACGGGGTGCACTGAACTGTAGGTC‑GGATAAGACGCATCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGA < 2:88938/140‑1 TACGGGGTGCACTGAACTGTAGGTC‑GGATAAGACGCATCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGA < 1:95918/140‑1 ACGGGGTGCACTGAACTGTAGGTCGGGATAAGACGCATCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGA < 1:82049/140‑1 TGCACTGAACTGTAGGTC‑GGATAAGACGCATCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGA > 2:389568/1‑140 GAACTGTAGGTC‑GGATAAGACGCATCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTG > 2:519464/1‑140 TGTAGGTC‑GGATAAGACGCATCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGC > 2:269473/1‑140 GGATAAGACGCATCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGA < 1:173123/140‑1 TCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGAT > 1:49222/1‑80 TACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTC‑GGATAAGACGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/349638‑349768‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGA > NC_000913/349774‑349900 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |