New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 4511620 | 42 (0.660) | 3 (0.050) | 3/276 | 6.1 | 7.4% | coding (795/957 nt) | fecD | ferric citrate ABC transporter membrane subunit FecD |
? | NC_000913 | = 4511656 | 33 (0.520) | coding (759/957 nt) | fecD | ferric citrate ABC transporter membrane subunit FecD | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below/above cutoff threshold. |
ACAAACCACGGCGCACCGATAATGGCGGTCAGCACGCCAACCGGGAGCTCCAGTGGGGGATGAATAATTCTCGCCAGCAGATCGGCAACCACCAACAGCAACGCACCTGTCAGGGCCGAAACAGGCAGCAGTCTGCGGTGACGTCCACCGGTGATGCTACGCATCATATGCGGCACCACGAGACCAATAAAGCTAATCGGGCCGCAGGCGGCCACGCCGGTAGATGTCATGGCGACAGCTAGTAACAAAGCCCAGAATCGGGTATGGGG > NC_000913/4511483‑4511751 | aCAAACCACGGCGCACCGATAATGGCGGTCAGCACGCCAACCGGGAGCTCCAGTGGGGGATGAATAATTCTCGCCAGCAGATCGGCAACCACCAACAGCAACGCACCTGTCAGGGCCGAAACAGGCAGCAGTCTGCGGTg < 2:395063/140‑1 (MQ=255) aCAAACCACGGCGCACCGATAATGGCGGTCAGCACGCCAACCGGGAGCTCCAGTGGGGGATGAATAATTCTCGCCAGCAGATCGGCAACCACCAACAGCAACGCACCTGTCAGGGCCGAAACAGGCAGCAGTCTGCGGTg < 1:26243/140‑1 (MQ=255) aCCACGGCGCACCGATAATGGCGGTCAGCACGCCAACCGGGAGCTCCAGTGGGGGATGAATAATTCTCGCCAGCAGATCGGCAACCACCAACAGCAACGCACCTGTCAGGGCCGAAACAGGCAGCAGTCTGCGGTGACGt > 2:752094/1‑140 (MQ=255) ccACGGCGCACCGATAATGGCGGTCAGCACGCCAACCGGGAGCTCCAGTGGGGGATGAATAATTCTCGCCAGCAGATCGGCAACCACCAACAGCAACGCACCTGTCAGGGCCGAAACAGGCAGCAGTCTGCGGTGACGTc < 2:1059386/140‑1 (MQ=255) cACGGCGCACCGATAATGGCGGTCAGCACGCCAACCGGGAGCTCCAGTGGGGGATGAATAATTCTCGCCAGCAGATCGGCAACCACCAACAGCAACGCACCTGTCAGGGCCGAAACAGGCAGCAGTCTGCGGTGACGTcc < 1:898114/140‑1 (MQ=255) cGGCGCACCGATAATGGCGGTCAGCACGCCAACCGGGAGCTCCAGTGGGGGATGAATAATTCTCGCCAGCAGATCGGCAACCACCAACAGCAACGCACCTGTCAGGGCCGAAACAGGCAGCAGTCTGCGGTGACGTCCAc < 1:481692/140‑1 (MQ=255) cgcACCGATAATGGCGGTCAGCACGCCAACCGGGAGCTCCAGTGGGGGATGAATAATTCTCGCCAGCAGATCGGCAACCACCAACAGCAACGCACCTGTCAGGGCCGAAACAGGCAGCAGTCTGCGGTGACGTCCACCgg < 1:638364/140‑1 (MQ=255) gATAATGGCGGTCAGCACGCCAACCGGGAGCTCCAGTGGGGGATGAATAATTCTCGCCAGCAGATCGGCAACCACCAACAGCAACGCACCTGTCAGGGCCGAAACAGGCAGCAGTCTGCGGTGACGTCCACCGGTGATGc < 2:259502/140‑1 (MQ=255) aTAATGGCGGTCAGCACGCCAACCGGGAGCTCCAGTGGGGGATGAATAATTCTCGCCAGCAGATCGGCAACCACCAACAGCAACGCACCTGTCAGGGCCGAAACAGGCAGCAGTCTGCGGTGACGTCCACCGGTGATGCt < 1:625980/140‑1 (MQ=255) tAATGGCGGTCAGCACGCCAACCGGGAGCTCCAGTGGGGGATGAATAATTCTCGCCAGCAGATCGGCAACCACCAACAGCAACGCACCTGTCAGGGCCGAAACAGGCAGCAGTCTGCGGTGACGTCCACCGGTGATGCTa < 1:1042050/140‑1 (MQ=255) tAATGGCGGTCAGCACGCCAACCGGGAGCTCCAGTGGGGGATGAATAATTCTCGCCAGCAGATCGGCAACCACCAACAGCAACGCACCTGTCAGGGCCGAAACAGGCAGCAGTCTGCGGTGACGTCCACCGGTGATGCTa < 1:184084/140‑1 (MQ=255) ggCGGTCAGCACGCCAACCGGGAGCTCCAGTGGGGGATGAATAATTCTCGCCAGCAGATCGGCAACCACCAACAGCAACGCACCTGTCAGGGCCGAAACAGGCAGCAGTCTGCGGTGACGTCCACCGGTGATGCTACGca < 2:874129/140‑1 (MQ=255) ggCGGTCAGCACGCCAACCGGGAGCTCCAGTGGGGGATGAATAATTCTCGCCAGCAGATCGGCAACCACCAACAGCAACGCACCTGTCAGGGCCGAAACAGGCAGCAGTCTGCGGTGACGTCCACCGGTGATGCTACGca < 1:647813/140‑1 (MQ=255) cGGTCAGCACGCCAACCGGGAGCTCCAGTGGGGGATGAATAATTCTCGCCAGCAGATCGGCAACCACCAACAGCAACGCACCTGTCAGGGCCGAAACAGGCAGCAGTCTGCGGTGACGTCCACCGGTGATGCTACGcatc < 1:399805/140‑1 (MQ=255) aCGCCAACCGGGAGCTCCAGTGGGGGATGAATAATTCTCGCCAGCAGATCGGCAACCACCAACAGCAACGCACCTGTCAGGGCCGAAACAGGCAGCAGTCTGCGGTGACGTCCACCGGTGATGCTACGCATCATATGCgg < 2:1032982/140‑1 (MQ=255) ccAACCGGGAGCTCCTGTGGGGGATGAATAATTCTCGCCAGCAGATCGGCAACCACCAACAGCAACGCACCTGTCAGGGCCGAAACAGGCAGCAGTCTGCGGTGACGTCCACCGGTGATGCTACGCATCATATGCGGccc < 2:1021568/140‑3 (MQ=255) aCCGGGAGCTCCAGTGGGGGATGAATAATTCTCGCCAGCAGATCGGCAACCACCAACAGCAACGCACCTGTCAGGGCCGAAACAGGCAGCAGTCTGCGGTGACGTCCACCGGTGATGCTACGCATCATATGCGGcacctc < 1:752094/140‑3 (MQ=255) aCCGGGAGCTCCAGTGGGGGATGAATAATTCTCGCCAGCAGATCGGCAACCACCAACAGCAACGCACCTGTCAGGGCCGAAACAGGCAGCAGTCTGCGGTGACGTCCACCGGTGATGCTACGCATCATATGCGGcaccac < 1:729980/140‑1 (MQ=255) gggAGCTCCAGTGGGGGATGAATAATTCTCGCCAGCAGATCGGCAACCACCAACAGCAACGCACCTGTCAGGGCCGAAACAGGCAGCAGTCTGCGGTGACGTCCACCGGTGATGCTACGCATCATATGCGGCACCACgag < 2:538915/140‑1 (MQ=255) cTCCAGTGGGGGATGAATAATTCTCGCCAGCAGATCGGCAACCACCAACAGCAACGCACCTGTCAGGGCCGAAACAGGCAGCAGTCTGCGGTGACGTCCACCGGTGATGCTACGCATCATATGCGGCACCACGAGACCaa > 1:1060338/1‑140 (MQ=255) cTCCAGTGGGGGATGAATAATTCTCGCCAGCAGATCGGCAACCACCAACAGCAACGCACCTGTCAGGGCCGAAACAGGCAGCAGTCTGCGGTGACGTCCACCGGTGATGCTACGCATCATATGCGGCACCACGAGACCaa > 1:732624/1‑140 (MQ=255) cTCCAGTGGGGGATGAATAATTCTCGCCAGCAGATCGGCAACCACCAACAGCAACGCACCTGTCAGGGCCGAAACAGGCAGCAGTCTGCGGTGACGTCCACCGGTGATGCTACGCATCATATGCGGCACCACGAGACCaa > 2:925059/1‑140 (MQ=255) aGTGGGGGATGAATAATTCTCGCCAGCAGATCGGCAACCACCAACAGCAACGCACCTGTCAGGGCCGAAACAGGCAGCAGTCTGCGGTGACGTCCACCGGTGATGCTACGCATCATATGCGGCACCACGAGACCAATaaa > 1:931083/1‑140 (MQ=255) aGTGGGGGATGAATAATTCTCGCCAGCAGATCGGCAACCACCAACAGCAACGCACCTGTCAGGGCCGAAACAGGCAGCAGTCTGCGGTGACGTCCACCGGTGATGCTACGCATCATATGCGGCACCACGAGACCAATaaa > 1:234593/1‑140 (MQ=255) aatTCTCGCCAGCAGATCGGCAACCACCAACAGCAACGCACCTGTCAGGGCCGAAACAGGCAGCAGTCTGCGGTGACGTCCACCGGTGATGCTACGCATCATATGCGGCACCACGAGACCAATAAAGCTAATCGGGCCGc > 2:716708/1‑140 (MQ=255) atTCTCGCCAGCAGATCGGCAACCACCAACAGCAACGCACCTGTCAGGGCCGAAACAGGCAGCAGTCTGCGGTGACGTCCACCGGTGATGCTACGCATCATATGCGGCACCACGAGACCAATAAAGCTAATCGGGCCGCa < 2:234593/140‑1 (MQ=255) ctcGCCAGCAGATCGGCAACCACCAACAGCAACGCACCTGTCAGGGCCGAAACAGGCAGCAGTCTGCGGTGACGTCCACCGGTGATGCTACGCATCATATGCGGCACCACGAGACCAATAAAGCTAATCGGGCCGCAggc > 2:792568/1‑140 (MQ=255) gCCAGCAGATCGGCAACCACCAACAGCAACGCACCTGTCAGGGCCGAAACAGGCAGCAGTCTGCGGTGACGTCCACCGGTGATGCTACGCATCATATGCGGCACCACGAGACCAATAAAGCTAATCGGGCCGCAggcggc > 2:644560/1‑140 (MQ=255) gCCAGCAGATCGGCAACCACCAACAGCAACGCACCTGTCAGGGCCGAAACAGGCAGCAGTCTGCGGTGACGTCCACCGGTGATGCTACGCATCATATGCGGCACCACGAGACCAATAAAGCTAATCGGGCCGCAggcggc < 2:931083/140‑1 (MQ=255) cagATCGGCAACCACCAACAGCAACGCACCTGTCAGGGCCGAAACAGGCAGCAGTCTGCGGTGACGTCCACCGGTGATGCTACGCATCATATGCGGCACCACGAGACCAATAAAGCTAATCGGGCCGCAGGCGGCCACGc > 1:856707/1‑140 (MQ=255) cagATCGGCAACCACCAACAGCAACGCACCTGTCAGGGCCGAAACAGGCAGCAGTCTGCGGTGACGTCCACCGGTGATGCTACGCATCATATGCGGCACCACGAGACCAATAAAGCTAATCGGGCCGCAGGCGGCCACGc < 1:644560/140‑1 (MQ=255) tCGGCAACCACCAACAGCAACGCACCTGTCAGGGCCGAAACAGGCAGCAGTCTGCGGTGACGTCCACCGGTGATGCTACGCATCATATGCGGCACCACGAGACCAATAAAGCTAATCGGGCCGCAGGCGGCCACGCCGGt < 1:925059/140‑1 (MQ=255) caccaACAGCAACGCACCTGTCAGGGCCGAAACAGGCGGCAGTCTGCGGTGACGTCCACCGGTGATGCTACGCATCATATGCGGCACCACGAGCCCAATAAAGCTAATCGGGCCGCAGGCGGCCACGCCGGTAGATGTCa < 2:540953/140‑1 (MQ=255) cAGCAACGCACCTGTCAGGGCCGAAACAGGCAGCAGTCTGCGGTGACGTCCACCGGTGATGCTACGCATCATATGCGGCACCACGAGACCAATAAAGCTAATCGGGCCGCAGGCGGCCACGCCGGTAGATGTCATGGCGa < 1:881056/140‑1 (MQ=255) cAGCAACGCACCTGTCAGGGCCGAAACAGGCAGCAGTCTGCGGTGACGTCCACCGGTGATGCTACGCATCATATGCGGCACCACGAGACCAATAAAGCTAATCGGGCCGCAGGCGGCCACGCCGGTAGATGTCATGGCGa < 1:792568/140‑1 (MQ=255) cAGCAACGCACCTGTCAGGGCCGAAACAGGCAGCAGTCTGCGGTGACGTCCACCGGTGATGCTACGCATCATATGCGGCACCACGAGACCAATAAAGCTAATCGGGCCGCAGGCGGCCACGCCGGTAGATGTCATGGCGa < 1:716708/140‑1 (MQ=255) cAACGCACCTGTCAGGGCCGAAACAGGCAGCAGTCTGCGGTGACGTCCACCGGTGATGCTACGCATCATATGCGGCACCACGAGACCAATAAAGCTAATCGGGCCGCAGGCGGCCACGCCGGTAGATGTc < 2:304434/130‑1 (MQ=255) cAACGCACCTGTCAGGGCCGAAACAGGCAGCAGTCTGCGGTGACGTCCACCGGTGATGCTACGCATCATATGCGGCACCACGAGACCAATAAAGCTAATCGGGCCGCAGGCGGCCACGCCGGTAGATGTc > 1:304434/1‑130 (MQ=255) cTGTCAGGGCCGAAACAGGCAGCAGTCTGCGGTGACGTCCACCGGTGATGCTACGCATCATATGCGGCACCACGAGACCAATAAAGCTAATCGGGCCGCAGGCGGCCACGCCGGTAGATGTCATGGCGACAGCTAGTAAc > 1:494041/1‑140 (MQ=255) gggCCGAAACAGGCAGCAGTCTGCGGTGACGTCCACCGGTGATGCTACGCATCATATGCGGCACCACGAGACCAATAAAGCTAATCGGGCCGCAGGCGGCCACGCCGGTAGATGTCATGGCGACAGCTAGTAACAAAGcc < 1:45467/140‑1 (MQ=255) aaaCAGGCAGCAGTCTGCGGTGACGTCCACCGGTGATGCTACGCATCATATGCGGCACCACGAGACCAATAAAGCTAATCGGGCCGCAGGCGGCCACGCCGGTAGATGTCATGGCGACAGCTAGTAACAAAGCCCAGAAt < 2:732624/140‑1 (MQ=255) gcagcaGTCTGCGGTGACGTCCACCGGTGATGCTACGCATCATATGCGGCACCACGAGACCAATAAAGCTAATCGGGCCGCAGGCGGCCACGCCGGTAGATGTCATGGCGACAGCTAGTAACAAAGCCCAGAATCGGGTa < 2:1060338/140‑1 (MQ=255) agTCTGCGGTGACGTCCACCGGTGATGCTACGCATCATATGCGGCACCACGAGACCAATAAAGCTAATCGGGCCGCAGGCGGCCACGCCGGTAGATGTCATGGCGACAGCTAGTAACAAAGCCCAGAATCGGGTATgggg < 1:820626/140‑1 (MQ=255) | ACAAACCACGGCGCACCGATAATGGCGGTCAGCACGCCAACCGGGAGCTCCAGTGGGGGATGAATAATTCTCGCCAGCAGATCGGCAACCACCAACAGCAACGCACCTGTCAGGGCCGAAACAGGCAGCAGTCTGCGGTGACGTCCACCGGTGATGCTACGCATCATATGCGGCACCACGAGACCAATAAAGCTAATCGGGCCGCAGGCGGCCACGCCGGTAGATGTCATGGCGACAGCTAGTAACAAAGCCCAGAATCGGGTATGGGG > NC_000913/4511483‑4511751 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |