| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,568,504 | 0 | T | G | 28.0% | 142.4 / 10.5 | 75 | T6P (ACC→CCC) | mdtM | multidrug efflux pump/bile salt:H(+) antiporter/Na(+):H(+) antiporter/K(+):H(+) antiporter |
| Reads supporting (aligned to +/- strand): ref base T (13/41); new base G (21/0); total (34/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.41e-10 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GGGCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGC‑A‑TAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTA > NC_000913/4568369‑4568637 | gggCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTaaaa > 2:792437/1‑140 (MQ=255) ccAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTaaaaaaa < 1:748665/140‑1 (MQ=255) cAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTaaaaaaaa > 1:517918/1‑139 (MQ=255) aGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACg < 1:921466/140‑1 (MQ=255) aCTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTg < 2:517918/140‑1 (MQ=255) aCATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGC‑A‑t > 1:543156/1‑140 (MQ=255) cATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAAc > 2:760937/1‑132 (MQ=255) cATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAAc < 1:760937/132‑1 (MQ=255) cATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGC‑A‑Ta < 2:529219/140‑1 (MQ=255) cATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGC‑A‑Ta < 1:902766/140‑1 (MQ=255) aaaaTCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGCGGG‑A‑TAAAAaaaaacc > 2:488888/1‑139 (MQ=255) aaTCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACCGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGGGGC‑A‑TAACAAACAACTcc < 2:1080756/140‑1 (MQ=255) aaTCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGC‑A‑TAACAAACAACTcc < 2:256739/140‑1 (MQ=255) aaTCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGC‑A‑TAACAAACAACTcc < 1:544975/140‑1 (MQ=255) aCGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGC‑A‑TAACAAACAACTCCTTGt < 2:982362/140‑1 (MQ=255) aCGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAATGGC‑A‑TAACAAAAAAAACCTTGt > 1:169928/1‑140 (MQ=255) tACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGC‑A‑TAACAAACAACTCCTTGTCCg < 2:196334/140‑1 (MQ=255) aCCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGC‑A‑TAACAAACAACTCCTTGTCCgg < 2:93816/140‑1 (MQ=255) ccACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGC‑A‑TAACAAAAAAATCCTTGTCCggg > 1:148711/1‑139 (MQ=255) tAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGCGGC‑A‑TAAAAAAAAAAACCCTGTCCCGA‑G‑AAccc > 2:490035/1‑140 (MQ=255) aaTGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAAAGTGGC‑A‑TAAAAAAAAACTCCTTGTCCGGG‑G‑AAcccc > 2:662487/1‑140 (MQ=255) gATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGC‑A‑TAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAAc < 1:581647/140‑1 (MQ=255) aTCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAACGTGGC‑A‑TAAAAAAAAACTCCTTTTCCGGA‑G‑AACCCCAACg > 2:268463/1‑140 (MQ=255) aTCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGC‑A‑TAAAAAACAACTCCCTGTCCGGA‑G‑GACCCCaaag > 2:972040/1‑138 (MQ=255) cccAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGC‑A‑TAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAACggg < 1:276638/140‑1 (MQ=255) cccAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGGGGC‑A‑TAACAAACAACTCCTTGTCCGGA‑G‑AACCCCCACggg > 2:276638/1‑140 (MQ=255) ccAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTGAAAAAAAGTGGC‑C‑AAAAAAAAAAACCCTTTTCCGGA‑G‑AAACCCCACgggg > 1:1053689/1‑140 (MQ=255) ccAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGC‑A‑TAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAACgggg > 1:549655/1‑140 (MQ=255) ccAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAAAGTGGC‑A‑TAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAACgggg > 2:320762/1‑140 (MQ=255) ccAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAACGTGGG‑A‑TAACAAAAAACACCCTGTCCGGA‑G‑AACCCCAACgggg > 2:91770/1‑140 (MQ=255) ccAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAACGCGGC‑A‑TAAAAAACAACTCCCTTTCCCGA‑G‑AACCCCAACgggg > 2:465465/1‑140 (MQ=255) ccAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGC‑A‑TAAAAAAAAAACCCTTGTCCGGA‑G‑AAACCCAACgggg > 2:67500/1‑140 (MQ=255) ccAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGGGGC‑A‑TAACAAAAAACTCCTTGTCCGGG‑G‑AACCCCCACcggg > 2:581647/1‑140 (MQ=255) cAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGGGGCGGCATGGCGGGTAAAAAAACGGGGC‑A‑TAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAACGGGGa < 1:582945/140‑1 (MQ=255) aGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAAAATGGC‑A‑TAACAAAAAAATCCCTGTCCGGAGG‑ACCCCCAACGGGGa > 2:628606/1‑140 (MQ=255) gCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGC‑A‑TAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAACGGGGaaaa < 2:292712/140‑1 (MQ=255) tGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGC‑A‑TAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAACGGGGAAAACg < 2:822625/140‑1 (MQ=255) tGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGC‑A‑TAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAACGGGGAAAACg < 1:222603/140‑1 (MQ=255) tGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGC‑A‑TAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAACGGGGAAAACg < 2:179394/140‑1 (MQ=255) tGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGC‑A‑TAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAACGGGGAAAACg < 1:618439/140‑1 (MQ=255) gATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGC‑A‑TAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAACGGGGAAAACGaa > 1:684061/1‑140 (MQ=255) gATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGC‑A‑TAACAAAAAACTCCTTGTCCGGA‑G‑AACCCCAACGGGGAAAACGaa > 2:961601/1‑140 (MQ=255) aTCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGC‑A‑TAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAACGGGGAAAACGaaa < 1:628606/140‑1 (MQ=255) aTCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGCGGG‑A‑TAACAAACAACCCCTTGTCCGGA‑G‑AAACCCAAAGGGGGAAAAGaaa > 2:869304/1‑140 (MQ=255) aTCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGTCAAAAAAACCACGCGC‑TAAAAAAAAAAT‑CTTATCCGCG‑G‑AACCCCAACCGGGGAAACACAATTGaa > 2:893346/1‑140 (MQ=255) aTCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAACGTGGG‑A‑TAACAAAAAACTCCTTGTCCGGA‑G‑AAACCCAACGGGGGAAACGAAAATCaa > 1:190604/1‑140 (MQ=255) aTCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGG‑A‑TAAAAAAAAACTCCTTTTCCGGA‑G‑AAACCCAACGGGGGAAAAGAAAATCaa > 1:1071761/1‑140 (MQ=255) aTCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGGGGC‑A‑TAAAAAAAAACTCCTTGTCCGGA‑G‑AACCCCAACGGGGGAAAAGAAAATCaa > 2:742073/1‑140 (MQ=255) aTCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGCGGC‑AGAAAAAAAAAACCCCTTTCCCGGG‑A‑ACCCCCAAAGGGGAAAA‑GAAAATCaa > 2:456013/1‑140 (MQ=255) ccGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGC‑A‑TAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAACGGGGAAAACGAAATTCAATa < 1:320762/140‑1 (MQ=255) gTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGAGAAAAAAAATGGC‑A‑TAAAAAAAAAATCCTTTTCAGGA‑GAAACCCCAACGGGG‑AAACAAAACTTAATAcc > 2:536018/1‑140 (MQ=255) tCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGC‑A‑TAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAACGGGGAAAACGAAATTCAATACCg < 1:662487/140‑1 (MQ=255) tCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAAAGTGGC‑A‑TAACAAACAACTCCTTGTCCGGA‑G‑AAACCCAACAGGGGAAAAGAAAATCAAAAccc > 2:209096/1‑139 (MQ=255) cGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAAAGTGGC‑A‑TAACAAAAAACTCCTTGTCCGGA‑G‑AACCCCAACGGGGAAAAAGAAAATCAATACCGt > 1:381194/1‑140 (MQ=255) aGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGC‑A‑TAACAAAAAACTCCTTGTCCGGA‑G‑AACCCCCACGGGGGAAAAGAAAATCAAAACCGTCggg > 1:986055/1‑139 (MQ=255) aGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGC‑A‑TAACAAAAAACTCCTTGTCCGGA‑G‑AACCCCCACGGGGGAAAAGAAAATCAAAAACGTCggg > 2:913590/1‑139 (MQ=255) cagcaAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGC‑A‑TAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACg < 1:414945/140‑1 (MQ=255) cagcaAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGC‑A‑TAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACg < 1:913590/140‑1 (MQ=255) tCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGC‑A‑TAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAg < 1:456013/140‑1 (MQ=255) tACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAAAGTGGC‑A‑TAACAAAAAACTCCTTGTCCGGA‑G‑AACCCCAACGGGGAAAACGAAAATCAATACCGTCGGTAATGACGAAAAGCAgggg > 2:417008/1‑138 (MQ=255) tACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGC‑A‑TAAAAAACAACTCCTTTTCCGGA‑G‑AACCCCAACGGGGAAAAAGAAAATAAATACCGTCGGTAATGACGAAAAGCAgggg > 2:45368/1‑138 (MQ=255) cAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGC‑A‑TAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTgag < 2:763372/140‑1 (MQ=255) aaaaTCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGC‑A‑TAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTgaga < 1:490035/140‑1 (MQ=255) aaaaTCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGC‑A‑TAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTgaga < 1:91770/140‑1 (MQ=255) aaTCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGC‑A‑TAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAg < 2:718053/140‑1 (MQ=255) cGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGC‑A‑TAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAAc < 2:684061/140‑1 (MQ=255) cGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGC‑A‑TAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAAc < 2:546531/140‑1 (MQ=255) ccATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGC‑A‑TAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACga < 2:1053689/140‑1 (MQ=255) ccATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGC‑A‑TAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACga < 1:869304/140‑1 (MQ=255) ccATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGC‑A‑TAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACga < 1:792437/140‑1 (MQ=255) tCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGC‑A‑TAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGAc < 1:417008/140‑1 (MQ=255) gggAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGC‑A‑TAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTg < 1:608611/140‑1 (MQ=255) aaaaaCAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGC‑A‑TAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCaa < 1:539368/140‑1 (MQ=255) gCGTGGCGGCATGGTGGGTAAAAAAACGTGGC‑A‑TAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTAc > 2:754828/1‑139 (MQ=255) gCGTGGCGGCATGGTGGGTAAAAAAACGTGGC‑A‑TAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTAc < 1:754828/139‑1 (MQ=255) tGGCGGCATGGCGGGGAAAAAAAAGGGGG‑A‑TAAAAAACAACTCCTTGTCCGGA‑G‑AAACCCAACGGGGGAAACGAAAATCAATACCGTCGGGAATGACGAAAGGCAGGGGAGAAGGGGAACGAGACTGCAAAAGTACTGaa > 2:358003/1‑140 (MQ=255) ggCGGGTAAAAAAACGTGGC‑A‑TAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGGAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTa < 2:549655/140‑1 (MQ=255) ggCGGGTAAAAAAACGTGGC‑A‑TAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTa < 2:169928/140‑1 (MQ=255) | GGGCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGC‑A‑TAACAAACAACTCCTTGTCCGGA‑G‑AACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTA > NC_000913/4568369‑4568637 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |