| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 1,671,388 | IS5 (–) +4 bp | coding (13‑16/309 nt) | asr → | acid shock protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1671388 = | 0 (0.000) | 29 (0.690) | 25/276 | 0.6 | 100% | coding (13/309 nt) | asr | acid shock protein |
| ? | NC_000913 | = 2290113 | NA (NA) | noncoding (1/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | = 1671391 | 0 (0.000) | 42 (1.000) | 26/276 | 0.5 | 100% | coding (16/309 nt) | asr | acid shock protein |
| ? | NC_000913 | 2101749 = | NA (NA) | noncoding (1195/1195 nt) | IS5 | repeat region | |||||
CGTTTGTACATATCGTTACACGCTGAAACCAACCACTCACGGAAGTCTGCCATTCCCAGGGATATAGTTATTTCAACGGCCCCGCAGTGGGGTTAAATGAAAAAACAAATTGAGGGTATGACAATGAAAAAAGTATTAGCTCTGGTTGTTGCCGCTGCTATGGGTCTGTCTTCTGCCGCCTTTGCTGCAGAGACTACGACCACACCTGCTCCGACTGCGACGACCACCAAAGCAGCGCCGGCGAAAACTACACATCATAAAAAACAGCATAAAGCAGC > NC_000913/1671253‑1671530 | cGTTTGTACATATCGTTACACGCTGAAACCAACCACTCACGGAAGTCTGCCATTCCCAGGGATATAGTTATTTCAACGGCCCCGCAGTGGGGTTAAATGAAAAAACAAATTGAGGGTATGACAATGAAAAAAGTATTAGg > 2:250099‑M1/1‑139 (MQ=255) tttGTACATATCGTTACACGCTGAAACCAACCACTCACGGAAGTCTGCCATTCCCAGGGATATAGTTATTTCAACGGCCCCGCAGTGGGGTTAAATGAAAAAACAAATTGAGGGTATGACAATGAAAAAAGTATTAGgga < 2:254246‑M1/140‑4 (MQ=255) tctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCTCTGGTTGTTGc < 2:453994‑M1/17‑1 (MQ=255) tCGTTACACGCTGAAACCAACCACTCACGGAAGTCTGCCATTCCCAGGGATATAGTTATTTCAACGGCCCCGCAGTGGGGTTAAATGAAAAAACAAATTGAGGGTATGACAATGAAAAAAGTATTAGggaaggtgcgaat < 1:223599‑M1/140‑14 (MQ=255) cGTTACACGCTGAAACCAACCACTCACGGAAGTCTGCCATTCCCAGGGATATAGTTATTTCAACGGCCCCGCAGTGGGGTTAAATGAAAAAACAAATTGAGGGTATGACAATGAAAAAAGTATTAGggaaggtgcgaata > 2:309068‑M1/1‑126 (MQ=255) cGTTACACGCTGAAACCAACCACTCACGGAAGTCTGCCATTCCCAGGGATATAGTTATTTCAACGGCCCCGCAGTGGGGTTAAATGAAAAAACAAATTGAGGGTATGACAATGAAAAAAGTATTAGggaaggtgcgaata > 2:309073‑M1/1‑126 (MQ=255) cGTTACACGCTGAAACCAACCACTCACGGAAGTCTGCCATTCCCAGGGATATAGTTATTTCAACGGCCCCGCAGTGGGGTTAAATGAAAAAACAAATTGAGGGTATGACAATGAAAAAAGTATTAGggaaggtgcgaata > 1:49490‑M1/1‑126 (MQ=255) cGTTACACGCTGAAACCAACCACTCACGGAAGTCTGCCATTCCCAGGGATATAGTTATTTCAACGGCCCCGCAGTGGGGTTAAATGAAAAAACAAATTGAGGGTATGACAATGAAAAAAGTATTAGggaaggtgcgaata > 2:64301‑M1/1‑126 (MQ=255) ttACACGCTGAAACCAACCACTCACGGAAGTCTGCCATTCCCAGGGATATAGTTATTTCAACGGCCCCGCAGTGGGGTTAAATGAAAAAACAAATTGAGGGTATGACAATGAAAAAAGTATTAGggaaggtgcgaataag < 1:64301‑M1/140‑17 (MQ=255) gacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCTCTGGTTGTTGCCgc > 2:661547‑M1/121‑140 (MQ=255) acggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCTCTGGTTGTTGCCgct < 2:61478‑M1/21‑1 (MQ=255) cgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCTCTGGTTGTTGCCGCTGCTa > 2:548354‑M1/116‑140 (MQ=255) gcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCTCTGGTTGTTGCCGCTGCTAt < 2:193439‑M1/26‑1 (MQ=255) tGAAACCAACCACTCACGGAAGTCTGCCATTCCCAGGGATATAGTTATTTCAACGGCCCCGCAGTGGGGTTAAATGAAAAAACAAATTGAGGGTATGACAATGAAAAAAGTATTAGggaaggtgcgaataagcggggaaa < 2:619536‑M1/140‑25 (MQ=255) tGAAACCAACCACTCACGGAAGTCTGCCATTCCCAGGGATATAGTTATTTCAACGGCCCCGCAGTGGGGTTAAATGAAAAAACAAATTGAGGGTATGACAATGAAAAAAGTATTAGggaaggtgcgaataagcggggaaa > 2:188461‑M1/1‑116 (MQ=255) actgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCTCTGGTTGTTGCCGCTGCTATGGgt > 1:562092‑M1/111‑140 (MQ=255) aaaCCAACCACTCACGGAAGTCTGCCATTCCCAGGGATATAGTTATTTCAACGGCCCCGCAGTGGGGTTAAATGAAAAAACAAATTGAGGGTATGACAATGAAAAAAGTATTAGggaaggtgcgaataagcggggaaatt > 1:134764‑M1/1‑114 (MQ=255) gctgaattcactgtcggcgaaggtaagttgtgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCTCTGGTTGTTGCCGCTGCTATGGgtctgt > 1:151841‑M1/107‑140 (MQ=255) accaCTCACGGAAGTCTGCCATTCCCAGGGATATAGTTATTTCAACGGCCCCGCAGTGGGGTTAAATGAAAAAACAAATTGAGGGTATGACAATGAAAAAAGTATTAGggaaggtgcgaataagcggggaaattcttctc > 2:554846‑M1/1‑108 (MQ=255) caCTCACGGAAGTCTGCCATTCCCAGGGATATAGTTATTTCAACGGCCCCGCAGTGGGGTTAAATGAAAAAACAAATTGAGGGTATGACAATGAAAAAAGTATTAGggaaggtgcgaataagcggggaaattcttctcgg < 1:518418‑M1/140‑35 (MQ=255) aCTCACGGAAGTCTGCCATTCCCAGGGATATAGTTATTTCAACGGCCCCGCAGTGGGGTTAAATGAAAAAACAAATTGAGGGTATGACAATGAAAAAAGTATTAGggaaggtgcgaataagcggggaaattcttctcggc < 2:534871‑M1/140‑36 (MQ=255) cTGCCATTCCCAGGGATATAGTTATTTCAACGGCCCCGCAGTGGGGTTAAATGAAAAAACAAATTGAGGGTATGACAATGAAAAAAGTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcat < 2:139655‑M1/140‑48 (MQ=255) cATTCCCAGGGATATAGTTATTTCAACGGCCCCGCAGTGGGGTTAAATGAAAAAACAAATTGAGGGTATGACAATGAAAAAAGTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttca < 1:57027‑M1/140‑52 (MQ=255) taagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCTCTGGTTGTTGCCGCTGCTATGGGTCTGTCTTCTGCCGCCTTTGCTGCaga > 1:61478‑M1/85‑140 (MQ=255) gttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCTCTGGTTGTTGCCGCTGCTATGGGTCTGTCTTCTGCCGCCTTTGCTGCAGAGAc > 1:420693‑M1/82‑140 (MQ=255) cAGGGATATAGTTATTTCAACGGCCCCGCAGTGGGGTTAAATGAAAAAACAAATTGAGGGTATGACAATGAAAAAAGTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttctt < 1:633631‑M1/140‑58 (MQ=255) tgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCTCTGGTTGTTGCCGCTGCTATGGGTCTGTCTTCTGCCGCCTTTGCTGCAGAGACTACGACCACAcc > 1:193439‑M1/70‑140 (MQ=255) tttCAACGGCCCCGCAGTGGGGTTAAATGAAAAAACAAATTGAGGGTATGACAATGAAAAAAGTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccga > 2:279445‑M1/1‑69 (MQ=255) ctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCTCTGGTTGTTGCCGCTGCTATGGGTCTGTCTTCTGCCGCCTTTGCTGCAGAGACTACGACCACACCTGCTCCg > 2:115977‑M1/61‑138 (MQ=255) ctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCTCTGGTTGTTGCCGCTGCTATGGGTCTGTCTTCTGCCGCCTATGCTGCAGAGACTACGACCACACCTGCTCCg < 1:115977‑M1/78‑1 (MQ=255) cGGCCCCGCAGTGGGGTTAAATGAAAAAACAAATTGAGGGTATGACAATGAAAAAAGTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatttttt < 1:100395‑M1/140‑78 (MQ=255) gttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCTCTGGTTGTTGCCGCTGCTATGGGTCTGTCTTCTGCCGCCTTTGCTGCAGAGACTACGACCACACCTGCTCCGACTg < 1:305637‑M1/82‑1 (MQ=255) ggCCCCGCAGTGGGGTTAAATGAAAAAACAAATTGAGGGTATGACAATGAAAAAAGTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttc > 1:388164‑M1/1‑62 (MQ=255) ccccGCAGTGGGGTTAAATGAAAAAACAAATTGAGGGTATGACAATGAAAAAAGTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctc > 1:669368‑M1/1‑60 (MQ=255) cccGCAGTGGGGTTAAATGAAAAAACAAATTGAGGGTATGACAATGAAAAAAGTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcc < 2:134764‑M1/140‑82 (MQ=255) tatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCTCTGGTTGTTGCCGCTGCTATGGGTCTGTCTTCTGCCGCCTTTGCTGCAGAGACTACGACCACACCTGCTCCGACTGcgac < 2:676779‑M1/86‑1 (MQ=255) atggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCTCTGGTTGTTGCCGCTGCTATGGGTCTGTCTTCTGCCGCCTTAGCTGCAGAGACTACGACCACACCTGCTCCGACTGcgacg > 2:538837‑M1/54‑140 (MQ=255) gggTTAAATGAAAAAACAAATTGAGGGTATGACAATGAAAAAAGTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgc > 2:9671‑M1/1‑50 (MQ=255) gggTTAAATGAAAAAACAAATTGAGGGTATGACAATGAAAAAAGTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgc > 2:248286‑M1/1‑50 (MQ=255) aaTGAAAAAACAAATTGAGGGTATGACAATGAAAAAAGTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaa < 1:432200‑M1/140‑97 (MQ=255) aaTGAAAAAACAAATTGAGGGTATGACAATGAAAAAAGTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaa < 1:398263‑M1/140‑97 (MQ=255) aaTGAAAAAACAAATTGAGGGTATGACAATGAAAAAAGTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaa < 2:336151‑M1/140‑97 (MQ=255) aaaaaaCAAATTGAGGGTATGACAATGAAAAAAGTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcag < 2:407839‑M1/140‑101 (MQ=255) aaaaaaCAAATTGAGGGTATGACAATGAAAAAAGTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcag < 1:250099‑M1/140‑101 (MQ=255) aaaaaaCAAATTGAGGGTATGACAATGAAAAAAGTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcag < 1:188461‑M1/140‑101 (MQ=255) tgatctcatatcagggacttgttcgcaccttccTTAGCTCTGGTTGTTGCCGCTGCTATGGGTCTGTCTTCTGCCGCCTTTGCTGCAGAGACTACGACCACACCTGCTCCGACTGCGACGACCACCAAAGCAGCGCCGGc > 1:31375‑M1/34‑140 (MQ=255) tctcatatcagggacttgttcgcaccttccTTAGCTCTGGTTGTTGCCGCTGCTATGGGTCTGTCTTCTGCCGCCTTTGCTGCAGAGACTACGACCACACCTGCTCCGACTGCGACGACCACCAAAGCAGCGCCGGCGaa > 2:21016‑M1/31‑140 (MQ=255) tcatatcagggacttgttcgcaccttccTTAGCTCTGGTTGTTGCCGCTGCTATGGGTCTGTCTTCTGCCGCCTTTGCTGCAGAGACTACGACCACACCTGCTCCGACTGCGACGACCACCAAAGCAGCGCCGGc < 1:83176‑M1/107‑1 (MQ=255) tcatatcagggacttgttcgcaccttccTTAGCTCTGGTTGTTGCCGCTGCTATGGGTCTGTCTTCTGCCGCCTTTGCTGCAGAGACTACGACCACACCTGCTCCGACTGCGACGACCACCAAAGCAGCGCCGGc > 2:83176‑M1/29‑135 (MQ=255) tcagggacttgttcgcaccttccTTAGCTCTGGTTGTTGCCGCTGCTATGGGTCTGTCTTCTGCCGCCTTTGCTGCAGAGACTACGACCACACCTGCTCCGACTGCGACGACCACCAAAGCAGCGCCGGCGAAAACTaca > 1:379268‑M1/24‑140 (MQ=255) agggacttgttcgcaccttccTTAGCTCTGGTTGTTGCCGCTGCTATGGGTCTGTCTTCTGCCGCCTTTGCTGCAGAGACTACGACCACACCTGCTCCGACTGCGACGACCACCAAAGCAGCGCCGGCGAAAACTAcaca > 2:488716‑M1/22‑140 (MQ=255) gggacttgttcgcaccttccTTAGCTCTGGTTGTTGCCGCTGCTATGGGTCTGTCTTCTGCCGCCTTTGCTGCAGAGACTACGACCACACCTGCTCCGACTGCGACGACCACCAAAGCAGCGCCGGCGAAAACTACAcat < 2:605801‑M1/120‑1 (MQ=255) ggacttgttcgcaccttccTTAGCTCTGGTTGTTGCCGCTGCTATGGGTCTGTCTTCTGCCGCCTTTGCTGCAGAGACTACGACCACACCTGCTCCGACTGCGACGACCACCAAAGCAGCGCCGGCGAAAACTACAcatc < 1:697144‑M1/121‑1 (MQ=255) gacttgttcgcaccttccTTAGCTCTGGTTGTTGCCGCTGCTATGGGTCTGTCTTCTGCCGCCTTTGCTGCAGAGACTACGACCACACCTGCTCCGACTGCGACGACCACCAAAGCAGCGCCGGCGAAAACTACAcatca < 1:380819‑M1/122‑1 (MQ=255) tGACAATGAAAAAAGTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttctt > 2:95767‑M1/1‑21 (MQ=255) gttcgcaccttccTTAGCTCTGGTTGTTGCCGCTGCTATGGGTCTGTCTTCTGCCGCCTTTGCTGCAGAGACTACGACCACACCTGCTCCGACTGCGACGACCACCAAAGCAGCGCCGGCGAAAACTACACATCATaaaa < 2:423491‑M1/127‑1 (MQ=255) aaaaaaGTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcg > 2:48480‑M1/1‑13 (MQ=255) aaaaaaGTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcg < 1:48480‑M1/134‑122 (MQ=255) accttccTTAGCTCTGGTTGTTGCCGCTGCTATGGGTCTGTCTTCTGCCGCCTTTGCTGCAGAGACTACGACCACACCTGCTCCGACTGCGACGACCACCAAAGCAGCGCCGGCGAAAACTACACATCATAAAAAACAGc < 2:297168‑M1/133‑1 (MQ=255) aaaGTATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaag < 1:356410‑M1/140‑131 (MQ=255) aTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccattta > 2:247889‑M1/1‑5 (MQ=255) aTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccattta < 1:247889‑M1/133‑129 (MQ=255) aTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccattta > 2:161724‑M1/1‑5 (MQ=255) aTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccattta < 1:161724‑M1/133‑129 (MQ=255) ttAGCTCTGGTTGTTGCCGCTGCTATGGGTCTGTCTTCTGCCGCCTTTGCTGCAGAGACTACGACCACACCTGCTCCGACTGCGACGACCACCAAAGCAGCGCCGGCGAAAACTACACATCATAAAAAACAGCATAAagc < 2:305637/140‑1 (MQ=255) tAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttat > 2:461995‑M1/1‑3 (MQ=255) tAGggaaggtgcgaataagcagggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttat > 2:448510‑M1/1‑3 (MQ=255) gggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatcc < 2:15324‑M1/140‑140 (MQ=255) gggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttctctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatcc < 2:462191‑M1/140‑140 (MQ=255) | CGTTTGTACATATCGTTACACGCTGAAACCAACCACTCACGGAAGTCTGCCATTCCCAGGGATATAGTTATTTCAACGGCCCCGCAGTGGGGTTAAATGAAAAAACAAATTGAGGGTATGACAATGAAAAAAGTATTAGCTCTGGTTGTTGCCGCTGCTATGGGTCTGTCTTCTGCCGCCTTTGCTGCAGAGACTACGACCACACCTGCTCCGACTGCGACGACCACCAAAGCAGCGCCGGCGAAAACTACACATCATAAAAAACAGCATAAAGCAGC > NC_000913/1671253‑1671530 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |