| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1968334 | 39 (0.860) | 3 (0.070) | 3/272 | 4.4 | 7.2% | coding (168/1050 nt) | cheB | protein‑glutamate methylesterase/protein glutamine deamidase |
| ? | NC_000913 | 1968339 = | 39 (0.870) | coding (163/1050 nt) | cheB | protein‑glutamate methylesterase/protein glutamine deamidase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AGCTCCAGCGCGCGCAGCGTGACTTCTGACCCTTTGCCGGTCAGGGAAGAAACCATCACAACGGGCATTGGACGCAAACGCATTAATTTTTCGAGGAAATCCAGTCCGTCCATCCGCGGCATTTCAACATCCAGCGTCAGCACATCGGGATTGAATTTCTTAATCAAGTCACGCGCGACCAGCGGATCAGGCGCGGTCGCCACCATTTCCATGTCGCTATGGCTGTTGATGATTTCTGTCATGATCTGGCGCATCAGTGCCGAATCATC > NC_000913/1968206‑1968474 | aGCTCCAGCGCGCGCAGCGTGACTTCTGACCCTTTGCCGGTCAGGGAAGAAACCATCACAACGGGCATTGGACGCAAACGCATTAATTTTTCGAGGAAATCCAGTCCGTCCATCCGCGGCATTTCAACATCCAGCGTCAg < 2:382919/140‑1 (MQ=255) cAGCGCGCGCAGCGTGACTTCTGACCCTTTGCCGGTCAGGGAAGAAACCATCACAACGGGCATTGGACGCAAACGCATTAATTTTTCGAGGAAATCCAGTCCGTCCATCCGCGGCATTTCAACATCCAGCGTCAGCACAt < 1:267918/140‑1 (MQ=255) cgcAGCGTGACTTCTGACCCTTTGCCGGTCAGGGAAGAAACCATCACAACGGGCATTGGACGCAAACGCATTAATTTTTCGAGGAAATCCAGTCCGTCCATCCGCGGCATTTCAACATCCAGCGTCAGCACATCGGGAtt > 2:86409/1‑140 (MQ=255) cgcAGCGTGACTTCTGACCCTTTGCCGGTCAGGGAAGAAACCATCACAACGGGCATTGGACGCAAACGCATTAATTTTTCGAGGAAATCCAGTCCGTCCATCCGCGGCATTTCAACATCCAGCGTCAGCACATCGGGAtt > 2:649643/1‑140 (MQ=255) cgcAGCGTGACTTCTGACCCTTTGCCGGTCAGGGAAGAAACCATCACAACGGGCATTGGACGCAAACGCATTAATTTTTCGAGGAAATCCAGTCCGTCCATCCGCGGCATTTCAACATCCAGCGTCAGCACATCGGGAtt > 1:276965/1‑140 (MQ=255) ccTTTGCCGGTCAGGGAAGAAACCATCACAACGGGCATTGGACGCAAACGCATTAATTTTTCGAGGAAATCCAGTCCGTCCATCCGCGGCATTTCAACATCCAGCGTCAGCACATCGGAATTGAATTTCTTAATCAAGTc > 2:465604/1‑140 (MQ=255) cTTTGCCGGTCAGGGAAGAAACCATCACAACGGGCATTGGACGCAAACGCATTAATTTTTCGAGGAAATCCAGTCCGTCCATCCGCGGCATTTCAACATC‑‑‑‑‑‑CAGCACATCGGGATTGAATTTCTTAATCAAGTCAcgcgcg < 1:75165/140‑1 (MQ=255) tCAGGGAAGAAACCATCACAACGGGCATTGGACGCAAACGCATTAATTTTTCGAGGAAATCCAGTCCGTCCATCCGCGGCATTTCAACATCCAGCGTCAGCACATCGGGATTGAATTTCTTAATCAAGTCACGCGCGAcc < 2:597086/140‑1 (MQ=255) ggAAGAAACCATCACAACGGGCATTGGACGCAAACGCATTAATTTTTCGAGGAAATCCAGTCCGTCCATCCGCGGCATTTCAACATCCAGCGTCAGCACATCGGGATTGAATTTCTTAATCAAGTCACGCGCGACCAGCg > 2:30126/1‑140 (MQ=255) agaaACCATCACAACGGGCATTGGACGCAAACGCATTAATTTTTCGAGGAAATCCAGTCCGTCCATCCGCGGCATTTCAACATCCAGCGTCAGCACATCGGGATTGAATTTCTTAATCAAGTCACGCGCGACCAGCGGAt < 2:453366/140‑1 (MQ=255) aaaCCATCACAACGGGCATTGGACGCAAACGCATTAATTTTTCGAGGAAATCCAGTCCGTCCATCCGCGGCATTTCAACATCCAGCGTCAGCACATCGGGATTGAATTTCTTAATCAAGTCACGCGCGACCAGCGGATCa > 1:631873/1‑140 (MQ=255) cATCACAACGGGCATTGGACGCAAACGCATTAATTTTTCGAGGAAATCCAGTCCGTCCATCCGCGGCATTTCAACATCCAGCGTCAGCACATCGGGATTGAATTTCTTAATCAAGTCACGCGCGACCAGCGGATCAGgcg < 1:86409/140‑1 (MQ=255) aTCACAACGGGCATTGGACGCAAACGCATTAATTTTTCGAGGAAATCCAGTCCGTCCATCCGCGGCATTTCAACATCCAGCGTCAGCACATCGGGATTGAATTTCTTAATCAAGTCACGCGCGACCAGCGGATCAGgcgc > 1:103389/1‑140 (MQ=255) aTCACAACGGGCATTGGACGCAAACGCATTAATTTTTCGAGGAAATCCAGTCCGTCCATCCGCGGCATTTCAACATCCAGCGTCAGCACATCGGGATTGAATTTCTTAATCAAGTCACGCGCGACCAGCGGATCAGgcgc > 2:471044/1‑140 (MQ=255) aTCACAACGGGCATTGGACGCAAACGCATTAATTTTTCGAGGAAATCCAGTCCGTCCATCCGCGGCATTTCAACATCCAGCGTCAGCACATCGGGATTGAATTTCTTAATCAAGTCACGCGCGACCAGCGGATCAGgcgc > 1:426358/1‑140 (MQ=255) tCACAACGGGCATTGGACGCAAACGCATTAATTTTTCGAGGAAATCCAGTCCGTCCATCCGCGGCATTTCAACATCCAGCGTCAGCACATCGGGATTGAATTTCTTAATCAAGTCACGCGCGACCAGCGGATCAGGcgcg > 2:168740/1‑140 (MQ=255) cacaACGGGCATTGGACGCAAACGCATTAATTTTTCGAGGAAATCCAGTCCGTCCATCCGCGGCATTTCAACATCCAGCGTCAGCACATCGGGATTGAATTTCTTAATCAAGTCACGCGCGACCAGCGGATCAGGCGCgg > 1:152783/1‑140 (MQ=255) caACGGGCATTGGACGCAAACGCATTAATTTTTCGAGGAAATCCAGTCCGTCCATCCGCGGCATTTCAACATCCAGCGTCAGCACATCGGAATTGAATTTCTTAATCAAGTCACGCGCGACCAGCGGATCAGGCGCGGTc < 1:465604/140‑1 (MQ=255) aCGGGCATTGGACGCAAACGCATTAATTTTTCGAGGAAATCCAGTCCGTCCATCCGCGGCATTTCAACATCCAGCGTCAGCACATCGGGATTGAATTTCTTAATCAAGTCACGCGCGACCAGCGGATCAGGCGCGGTCGc < 1:168740/140‑1 (MQ=255) cGGGCATTGGACGCAAACGCATTAATTTTTCGAGGAAATCCAGTCCGTCCATCCGCGGCATTTCAACATCCAGCGTCAGCACATCGGGATTGAATTTCTTAATCAAGTCACGCGCGACCAGCGGATCAGGCGCGGTCGcc > 2:480899/1‑140 (MQ=255) gACGCAAACGCATTAATTTTTCGAGGAAATCCAGTCCGTCCATCCGCGGCATTTCAA‑‑‑‑CAGCGTCAGCACATCGGGATTGAATTTCTTAATCAAGTCACGCGCGACCAGCGGATCAGGCGCGGTCGCCACCATTTCCATGt > 2:758162/1‑140 (MQ=255) cGCAAACGCATTAATTTTTCGAGGAAATCCAGTCCGTCCATCCGCGGCATTTCAACATCCAGCGTCAGCACATCGGGATTGAATTTCTTAATCAAGTCACGCGCGACCAGCGGATCAGGCGCGGTCGCCACCATTTCCAt < 2:716527/140‑1 (MQ=255) cAAACGCATTAATTTTTCGAGGAAATCCAGTCCGTCCATCCGCGGCATTTCAACATCCAGCGTCAGCACATCGGGATTGAATTTCTTAATCAAGTCACGCGCGACCAGCGGATCAGGCGCGGTCGCCACCATTTCCATGt < 2:276965/140‑1 (MQ=255) ttAATTTTTCGAGGAAATCCAGTCCGTCCATCCGCGGCATTTCAACATCCAGCGTCAGCACATCGGGATTGAATTTCTTAATCAAGTCACGCGCGACCAGCGGATCAGGCGCGGTCGCCACCATTTCCATGTCGCTATgg < 1:480899/140‑1 (MQ=255) cGAGGAAATCCAGTCCGTCCATCCGCGGCATTTCAACATCCAGCGTCAGCACATCGGGATTGAATTTCTTAATCAAGTCACGCGCGACCAGCGGATCAGGCGCGGTCGCCACCATTTCCATGTCGCTATGGCTGTtgatg > 2:214306/1‑140 (MQ=255) cGAGGAAATCCAGTCCGTCCATCCGCGGCATTTCAA‑‑‑‑CAGCGTCAGCACATCGGGATTGAATTTCTTAATCAAGTCACGCGCGACCAGCGGATCAGGCGCGGTCGCCACCATTTCCATGTCGCTATGGCTGTTGATGAttt < 1:758162/140‑1 (MQ=255) gAAATCCAGTCCGTCCATCCGCGGCATTTCAACATCCAGCGTCAGCACATCGGGATTGAATTTCTTAATCAAGTCACGCGCGACCAGCGGATCAGGCGCGGTCGCCACCATTTCCATGTCGCTATGGCTGTTGATGAttt < 2:468049/140‑1 (MQ=255) gAAATCCAGTCCGTCCATCCGCGGCATTTCAACATCCAGCGTCAGCACATCGGGATTGAATTTCTTAATCAAGTCACGCGCGACCAGCGGATCAGGCGCGGTCGCCACCATTTCCATGTCGCTATGGCTGTTGATGAttt < 1:247468/140‑1 (MQ=255) cAGTCCGTCCATCCGCGGCATTTCAACATCCAGCGTCAGCACATCGGGATTGAATTTCTTAATCAAGTCACGCGCGACCAGCGGATCAGGCGCGGTCGCCACCATTTCCATGTCGCTATGGCTGTTGATGATTTCTGTCa < 1:471044/140‑1 (MQ=255) tccgtccATCCGCGGCATTTCAACATCCAGCGTCAGCACATCGGGATTGAATTTCTTAATCAAGTCACGCGCGACCAGCGGATCAGGCGCGGTCGCCACCATTTCCATGTCGCTATGGCTGTTGATGATTTCTGTCATGa < 2:733879/140‑1 (MQ=255) ccgtccATCCGCGGCATTTCAACATCCAGCGTCAGCACATCGGGATTGAATTTCTTAATCAAGTCACGCGCGACCAGCGGATCAGGCGCGGTCGCCACCATTTCCATGTCGCTATGGCTGTTGATGATTTCTGTCATGAt < 2:109769/140‑1 (MQ=255) gtccATCCGCGGCATTTCAACATCCAGCGTCAGCACATCGGGATTGAATTTCTTAATCAAGTCACGCGCGACCAGCGGATCAGGCGCGGTCGCCACCATTTCCATGTCGCTATGGCTGTTGATGAttt < 2:712233/128‑1 (MQ=255) gtccATCCGCGGCATTTCAACATCCAGCGTCAGCACATCGGGATTGAATTTCTTAATCAAGTCACGCGCGACCAGCGGATCAGGCGCGGTCGCCACCATTTCCATGTCGCTATGGCTGTTGATGAttt > 1:712233/1‑128 (MQ=255) tccATCCGCGGCATTTCAACATCCAGCGTCAGCACATCGGGATTGAATTTCTTAATCAAGTCACGCGCGACCAGCGGATCAGGCGCGGTCGCCACCATTTCCATGTCGCTATGGCTGTTGATGAttt < 1:102459/127‑1 (MQ=255) tccATCCGCGGCATTTCAACATCCAGCGTCAGCACATCGGGATTGAATTTCTTAATCAAGTCACGCGCGACCAGCGGATCAGGCGCGGTCGCCACCATTTCCATGTCGCTATGGCTGTTGATGAttt > 2:102459/1‑127 (MQ=255) tccATCCGCGGCATTTCAACATCCAGCGTCAGCACATCGGGATTGAATTTCTTAATCAAGTCACGCGCGACCAGCGGATCAGGCGCGGTCGCCACCATTTCCATGTCGCTATGGCTGTTGATGATTTCTGTCATGATCTg > 2:597342/1‑140 (MQ=255) tccATCCGCGGCATTTCAACATCCAGCGTCAGCACATCGGGATTGAATTTCTTAATCAAGTCACGCGCGACCAGCGGATCAGGCGCGGTCGCCACCATTTCCATGTCGCTATGGCTGTTGATGATTTCTGTCATGATCTg > 2:141966/1‑140 (MQ=255) cgcgGCATTTCAACATCCAGCGTCAGCACATCGGGATTGAATTTCTTAATCAAGTCACGCGCGACCAGCGGATCAGGCGCGGTCGCCACCATTTCCATGTCGCTATGGCTGTTGATGATTTCTGTCATGATCTGGCGCAt < 2:152783/140‑1 (MQ=255) ggCATTTCAACATCCAGCGTCAGCACATCGGGATTGAATTTCTTAATCAAGTCACGCGCGACCAGCGGATCAGGCGCGGTCGCCACCATTTCCATGTCGCTATGGCTGTTGATGATTTCTGTCATGATCTGGCGCATCAg > 2:733467/1‑140 (MQ=255) tttCAACATCCAGCGTCAGCACATCGGGATTGAATTTCTTAATCAAGTCACGCGCGACCAGCGGATCAGGCGCGGTCGCCACCATTTCCATGTCGCTATGGCTGTTGATGATTTCTGTCATGATCTGGCGCATCAGTGcc < 2:426358/140‑1 (MQ=255) aTCCAGCGTCAGCACATCGGGATTGAATTTCTTAATCAAGTCACGCGCGACCAGCGGATCAGGCGCGGTCGCCACCATTTCCATGTCGCTATGGCTGTTGATGATTTCTGTCATGATCTGGCGCATCAGTGCCGAatcat < 1:597342/140‑1 (MQ=255) tCCAGCGTCAGCACATCGGGATTGAATTTCTTAATCAAGTCACGCGCGACCAGCGGATCAGGCGCGGTCGCCACCATTTCCATGTCGCTATGGCTGTTGATGATTTCTGTCATGATCTGGCGCATCAGTGCCGAatcatc > 1:679650/1‑140 (MQ=255) | AGCTCCAGCGCGCGCAGCGTGACTTCTGACCCTTTGCCGGTCAGGGAAGAAACCATCACAACGGGCATTGGACGCAAACGCATTAATTTTTCGAGGAAATCCAGTCCGTCCATCCGCGGCATTTCAACATCCAGCGTCAGCACATCGGGATTGAATTTCTTAATCAAGTCACGCGCGACCAGCGGATCAGGCGCGGTCGCCACCATTTCCATGTCGCTATGGCTGTTGATGATTTCTGTCATGATCTGGCGCATCAGTGCCGAATCATC > NC_000913/1968206‑1968474 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |