| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 713,966 | Δ84 bp | coding (409‑492/1641 nt) | pgm → | phosphoglucomutase |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 713966 | 714049 | 84 | 58 [0] | [0] 58 | pgm | phosphoglucomutase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 713965 | 0 (0.000) | 51 (0.780) | 37/258 | 0.5 | 100% | coding (408/1641 nt) | pgm | phosphoglucomutase |
| ? | NC_000913 | 714050 = | 0 (0.000) | coding (493/1641 nt) | pgm | phosphoglucomutase | |||||
GTCCGAACCTGCATTCATTTCCGTTCTGGAAGTGCTGGCAGCGAACGGCGTTGATGTCATTGTGCAGGAAAACAATGGCTTCACCCCGACGCCTGCCGTTTCCAATGCCATCCTGGTTCACAATAAAAAAGGTGGCCCGCTGGCAGACGGTATCGTGATTACACCGTCCCATAACCCGCCGGAAGATGGTGGAATCAAATACAATCCGCCAAATGGTGGCCCGGCTGATACCAACGTCACTAAAGTGGTGGAAGACAGGGCCAACGCACTGCTGG > NC_000913/713827‑714101 | gTCCGAACCTGCATTCATTTCCGTTCTGGAAGTGCTGGCAGCGAACGGCGTTGATGTCATTGTGCAGGAAAACAATGGCTTCACCCCGACGCCTGCCGTTTCCAATGCCATCCTGGGTCACAATAAAAAAGGTGGCCCGg > 2:492441‑M1/1‑139 (MQ=255) tCCGAACCTGCATTCATTTCCGTTCTGGAAGTGCTGGCAGCGAACGGCGTTGATGTCATTGTGCAGGAAAACAATGGCTTCACCCCGACGCCTGTCGTTTCCAATGCCATCCTGGTTCACAATAAAAAAGGTGGCCCGgc > 1:461839‑M1/1‑138 (MQ=255) tCCGAACCTGCATTCATTTCCGTTCTGGAAGTGCTGGCAGCGAACGGCGTTGATGTCATTGTGCAGGAAAACAATGGCTTCACCCCGACGCCTGCCGTTTCCAATGCCATCCTGGTTCACAATAAAAAAGGTGGCCCGgc > 2:1020604‑M1/1‑138 (MQ=255) cGAACCTGCATTCATTTCCGTTCTGGAAGTGCTGGCAGCGAACGGCGTTGATGTCATTGTGCAGGAAAACAATGGCTTCACCCCGACGCCTGCCGTTTCCAATGCCATCCTGGTTCACAATAAAAAAGGTGGCCCGgctg > 1:534888‑M1/1‑136 (MQ=255) aaCCTGCATTCATTTCCGTTCTGGAAGTGCTGGCAGCGAACGGCGTTGATGTCATTGTGCAGGAAAACAATGGCTTCACCCCGACGCCTGCCGTTTCCAATGCCATCCTGGTTCACAATAAAAAAGGTGGCCCGgctgat > 1:1141867‑M1/1‑134 (MQ=255) cTGCATTCATTTCCGTTCTGGAAGTGCTGGCAGCGAACGGCGTTGATGTCATTGTGCAGGAAAACAATGGCTTCACCCCGACGCCTGCCGTTTCCAATGCCATCCTGGTTCACAATAAAAAAGGTGGCCCGgctgatacc < 2:293832‑M1/140‑10 (MQ=255) tGCATTCATTTCCGTTCTGGAAGTGCTGGCAGCGAACGGCGTTGATGTCATTGTGCAGGAAAACAATGGCTTCACCCCGACGCCTGCCGTTTCCAATGCCATCCTGGTTCACAATAAAAAAGGTGGCCCGgctgatacca > 2:348778‑M1/1‑130 (MQ=255) gCATTCATTTCCGTTCTGGAAGTGCTGGCAGCGAACGGCGTTGATGTCATTGTGCAGGAAAACAATGGCTTCACCCCGACGCCTGCCGTTTCCAATGCCATCCTGGTTCACAATAAAAAAGGTGGCCCGgctgataccaa < 2:519141‑M1/140‑12 (MQ=255) cattcattTCCGTTCTGGAAGTGCTGGCAGCGAACGGCGTTGATGTCATTGTGCAGGAAAACAATGGCTTCACCCCGACGCCTGCCGTTTCCAATGCCATCCTGGTTCACAATAAAAAAGGTGGCCCGgctgataccaac > 2:547918‑M1/1‑128 (MQ=255) cattcattTCCGTTCTGGAAGTGCTGGCAGCGAACGGCGTTGATGTCATTGTGCAGGAAAACAATGGCTTCACCCCGACGCCTGCCGTTTCCAATGCCATCCTGGTTCACAATAAAAAAGGTGGCCCGgctgataccaac > 2:355397‑M1/1‑128 (MQ=255) cattcattTCCGTTCTGGAAGTGCTGGCAGCGAACGGCGTTGATGTCATTGTGCAGGAAAACAATGGCTTCACCCCGACGCCTGCCGTTTCCAATGCCATCCTGGTTCACAATAAAAAAGGTGGCCCGgctgataccaac > 1:194051‑M1/1‑128 (MQ=255) cattcattTCCGTTCTGGAAGTGCTGGCAGCGAACGGCGTTGATGTCATTGTGCAGGAAAACAATGGCTTCACCCCGACGCCTGCCGTTTCCAATGCCATCCTGGTTCACAATAAAAAAGGTGGCCCGgctgataccaac < 2:134898‑M1/140‑13 (MQ=255) attTCCGTTCTGGAAGTGCTGGCAGCGAACGGCGTTGATGTCATTGTGCAGGAAAACAATGGCTTCACCCCGACGCCTGCCGTTTCCAATGCCATCCTGGTTCACAATAAAAAAGGTGGCCCGgctgataccaacgtcac > 2:1048886‑M1/1‑123 (MQ=255) ttCCGTTCTGGAAGTGCTGGCAGCGAACGGCGTTGATGTCATTGTGCAGGAAAACAATGGCTTCACCCCGACGCCTGCCGTTTCCAATGCCATCCTGGTTCACAATAAAAAAGGTGGCCCGgctgataccaa < 2:626207‑M1/132‑12 (MQ=255) ttCCGTTCTGGAAGTGCTGGCAGCGAACGGCGTTGATGTCATTGTGCAGGAAAACAATGGCTTCACCCCGACGCCTGCCGTTTCCAATGCCATCCTGGTTCACAATAAAAAAGGTGGCCCGgctgataccaa > 1:626207‑M1/1‑121 (MQ=255) tCCGTTCTGGAAGTGCTGGCAGCGAACGGCGTTGATGTCATTGTGCAGGAAAACAATGGCTTCACCCCGACGCCTGCCGTTTCCAATGCCATCCTGGTTCACAATAAAAAAGGTGGCCCGgctgataccaacgtcactaa < 2:15537‑M1/140‑21 (MQ=255) cGTTCTGGAAGTGCTGGCAGCGAACGGCGTTGATGTCATTGTGCAGGAAAACAATGGCTTCACCCCGACGCCTGTCGTTTCCAATGCCATCCTGGTTCACAATAAAAAAGGTGGCCCGgctgataccaacgtcactaaag < 2:461839‑M1/140‑23 (MQ=255) cGTTCTGGAAGTGCTGGCAGCGAACGGCGTTGATGTCATTGTGCAGGAAAACAATGGCTTCACCCCGACGCCTGCCGTTTCCAATGCCATCCTGGTTCACAATAAAAAAGGTGGCCCGgctgataccaacgtcactaaag < 1:355397‑M1/140‑23 (MQ=255) tCTGGAAGTGCTGGCAGCGAACGGCGTTGATGTCATTGTGCAGGAAAACAATGGCTTCACCCCGACGCCTGCCGTTTCCAATGCCATCCTGGTTCACAATAAAAAAGGTGGCCCGgctgataccaacgtcactaaagtgg > 1:851665‑M1/1‑115 (MQ=255) gAAGTGCTGGCAGCGAACGGCGTTGATGTCATTGTGCAGGAAAACAATGGCTTCACCCCGACGCCTGCCGTTTCCAATGCCATCCTGGTTCACAATAAAAAAGGTGGCCCGgctgataccaacgtcactaaagtggtgga > 1:136179‑M1/1‑111 (MQ=255) cTGGCAGCGAACGGCGTTGATGTCATTGTGCAGGAAAACAATGGCTTCACCCCGACGCCTGCCGTTTCCAATGCCATCCTGGTTCACAATAAAAAAGGTGGCCCGgctgataccaacgtcactaaagtggtggaagacag < 2:1141867‑M1/140‑36 (MQ=255) gCAGCGAACGGCGTTGATGTCATTGTGCAGGAAAACAATGGCTTCACCCCGACGCCTGCCGTTTCCAATGCCATCCTGGTTCACAATAAAAAAGGTGGCCCGgctgataccaacgtcactaaagtggtggaagacagggc < 1:492441‑M1/140‑39 (MQ=255) aaCGGCGTTGATGTCATTGTGCAGGAAAACAATGGCTTCACCCCGACGCCTGCCGTTTCCAATGCCATCCTGGTTCACAATAAAAAAGGTGGCCCGgctgataccaacgtcactaaagtggtggaagacagggccaacgc > 1:1015920‑M1/1‑96 (MQ=255) aCGGCGTTGATGTCATTGTGCAGGAAAACAATGGCTTCACCCCGACGCCTGCCGTTTCCAATGCCATCCTGGTTCACAATAAAAAAGGTGGCCCGgctgataccaacgtcactaaagtggtggaagacagggccaacgca < 2:415905‑M1/140‑46 (MQ=255) gTTGATGTCATTGTGCAGGAAAACAATGGCTTCACCCCGACGCCTGCCGTTTCCAATGCCATCCTGGTTCACAATAAAAAAGGTGGCCCGgctgataccaacgtcactaaagtggtggaagacagggccaacgcactgct < 1:627402‑M1/140‑51 (MQ=255) tGTCATTGTGCAGGAAAACAATGGCTTCACCCCGACGCCTGCCGTTTCCAATGCCATCCTGGTTCACAATAAAAAAGGTGGCCCGgctgataccaacgtcactaaagtggtggaagacagggccaacgcactgctggccg < 2:99284‑M1/140‑56 (MQ=255) tGTCATTGTGCAGGAAAACAATGGCTTCACCCCGACGCCTGCCGTTTCCAATGCCATCCTGGTTCACAATAAAAAAGGTGGCCCGgctgataccaacgtcactaaagtggtggaagacagggccaacgcactgctggccg < 2:194051‑M1/140‑56 (MQ=255) tGTCATTGTGCAGGAAAACAATGGCTTCACCCCGACGCCTGCCGTTTCCAATGCCATCCTGGTTCACAATAAAAAAGGTGGCCCGgctgataccaacgtcactaaagtggtggaagacagggccaacgcactgctggccg < 2:1015920‑M1/140‑56 (MQ=255) aaaCAATGGCTTCACCCCGACGCCTGCCGTTTCCAATGCCATCCTGGTTCACAATAAAAAAGGTGGCCCGgctgataccaacgtcactaaagtggtggaagacagggccaacgcactgctggccgatggcctgaaaggcg < 1:487983‑M1/140‑71 (MQ=255) aCAATGGCTTCACCCCGACGCCTGCCGTTTCCAATGCCATCCTGGTTCACAATAAAAAAGGTGGCCCGgctgataccaacgtcactaaagtggtggaagacagggccaacgcactgctggccgatggcctgaaaggcgtg < 2:397854‑M1/140‑73 (MQ=255) aCAATGGCTTCACCCCGACGCCTGCCGTTTCCAATGCCATCCTGGTTCACAATAAAAAAGGTGGCCCGgctgataccaacgtcactaaagtggtggaagacagggccaacgcactgctggccgatggcctgaaaggcgtg < 1:1001024‑M1/140‑73 (MQ=255) cTTCACCCCGACGCCTGCCGTTTCCAATGCCATCCTGGTTCACAATAAAAAAGGTGGCCCGgctgataccaacgtcactaaagtggtggaagacagggccaacgcactgctggccgatggcctgaaaggcgtgaagcgta < 1:1020604‑M1/140‑80 (MQ=255) cTTCACCCCGACGCCTGCCGTTTCCAATGCCATCCTGGTTCACAATAAAAAAGGTGGCCCGgctgataccaacgtcactaaagtggtggaagacagggccaacgcactgctggccgatggcctgaaaggcgtgaagcgta < 1:1027853‑M1/140‑80 (MQ=255) cTTCACCCCGACGCCTGCCGTTTCCAATGCCATCCTGGTTCACAATAAAAAAGGTGGCCCGgctgataccaacgtcactaaagtggtggaagacagggccaacgcactgctggccgatggcctgaaaggcgtgaagcgta < 2:989900‑M1/140‑80 (MQ=255) cGCCTGCCGTTTCCAATGCCATCCTGGTTCACAATAAAAAAGGTGGCCCGgctgataccaacgtcactaaagtggtggaagacagggccaacgcactgctggccgatggcctgaaaggcgtgaagcgtatctccctcgac < 1:1048886‑M1/140‑91 (MQ=255) cGCCTGCCGTTTCCAATGCCATCCTGGTTCACAATAAAAAAGGTGGCCCGgctgataccaacgtcactaaagtggtggaagacagggccaacgcactgctggccgatggcctgaaaggcgtgaagcgtatctccctcgac < 2:365216‑M1/140‑91 (MQ=255) ccGTTTCCAATGCCATCCTGGTTCACAATAAAAAAGGTGGCCCGgctgataccaacgtcactaaagtggtggaagacagggccaacgcactgctggccgatggcctgaaaggcgtgaagcgtatctccctcgacgaagcg > 2:759967‑M1/1‑44 (MQ=255) tCCAATGCCATCCTGGTTCACAATAAAAAAGGTGGCCCGgctgataccaacgtcactaaagtggtggaagacagggccaacgcactgctggccgatggcctgaaaggcgtgaagcgtatctccctcgacgaagcgatggc > 2:294128‑M1/1‑39 (MQ=255) cAATGCCATCCTGGTTCACAATAAAAAAGGTGGCCCGgctgataccaacgtcactaaagtggtggaagacagggccaacgcactgctggccgatggcctgaaaggcgtgaagcgtatctccctcgacgaagcgatggcat < 1:1094953‑M1/140‑104 (MQ=255) gCCATCCTGGTTCACAATAAAAAAGGTGGCCCGgctgataccaacgtcactaaagtggtggaagacagggccaacgcactgctggccgatggcctgaaaggcgtgaagcgtatctccctcgacgaagcgatggcatccgg < 1:1150746‑M1/140‑108 (MQ=255) ccTGGTTCACAATAAAAAAGGTGGCCCGgctgataccaacgtcactaaagtggtggaagacagggccaacgcactgctggccgatggcctgaaaggcgtgaagcgtatctccctcgacgaagcgatggcatccggtcatg > 2:381641‑M1/1‑28 (MQ=255) ggTTCACAATAAAAAAGGTGGCCCGgctgataccaacgtcactaaagtggtggaagacagggccaacgcactgctggccgatggcctgaaaggcgtgaagcgtatctccctcgacgaagcgatggcatccggtcatgtga < 1:118527‑M1/140‑116 (MQ=255) ggTTCACAATAAAAAAGGTGGCCCGgctgataccaacgtcactaaagtggtggaagacagggccaacgcactgctggccgatggcctgaaaggcgtgaagcgtatctccctcgacgaagcgatggcatccggtcatgtga < 1:36094‑M1/140‑116 (MQ=255) gTTCACAATAAAAAAGGTGGCCCGgctgataccaacgtcactaaagtggtggaagacagggccaacgcactgctggccgatggcctgaaaggcgtgaagcgtatctccctcgacgaagcgatggcatccggtcatgtgaa < 2:207651‑M1/140‑117 (MQ=255) gTTCACAATAAAAAAGGTGGCCCGgctgataccaacgtcactaaagtggtggaagacagggccaacgcactgctggccgatggcctgaaaggcgtgaagcgtatctccctcgacgaagcgatggcatccggtcatgtgaa > 1:15989‑M1/1‑24 (MQ=255) cacaATAAAAAAGGTGGCCCGgctgataccaacgtcactaaagtggtggaagacagggccaacgcactgctggccgatggcctgaaaggcgtgaagcgtatctccctcgacgaagcgatggcatccggtcatgtgaaaga > 2:1125378‑M1/1‑21 (MQ=255) caATAAAAAAGGTGGCCCGgctgataccaacgtcactaaagtggtggaagacagggccaacgcactgctggccgatggcctgaaaggcgtgaagcgtatctccctcgacgaagcgatggcatccggtcatgtgaaagagc > 1:108758‑M1/1‑19 (MQ=255) caATAAAAAAGGTGGCCCGgctgataccaacgtcactaaagtggtggaagacagggccaacgcactgctggccgatggcctgaaaggcgtgaagcgtatctccctcgacgaagcgatggcatccggtcatgtgaaagagc > 1:44254‑M1/1‑19 (MQ=255) aaTAAAAAAGGTGGCCCGgctgataccaacgtcactaaagtggtggaagacagggccaacgcactgctggccgatggcctgaaaggcgtgaagcgtatctccctcgacgaagcgatggcatccggtcatgtgaaagagca > 2:163080‑M1/1‑18 (MQ=255) aaTAAAAAAGGTGGCCCGgctgataccaacgtcactaaagtggtggaagacagggccaacgcactgctggccgatggcctgaaaggcgtgaagcgtatctccctcgacgaagcgatggcatccggtcatgtgaaagagca < 1:381641‑M1/140‑123 (MQ=255) aaTAAAAAAGGTGGCCCGgctgataccaacgtcactaaagtggtggaagacagggccaacgcactgctggccgatggcctgaaaggcgtgaagcgtatctccctcgacgaagcgatggcatccggtcatgtgaaagagca > 1:803179‑M1/1‑18 (MQ=255) gTGGCCCGgctgataccaacgtcactaaagtggtggaaggcagggccaacgcactgctggccgatggcctgaaaggcgtgaagcgtatctccctcgacgaagcgatggcatccggtcatgtgaaagagc < 1:705197‑M1/129‑122 (MQ=255) gTGGCCCGgctgataccaacgtcactaaagtggtggaagacagggccaacgcactgctggccgatggcctgaaaggcgtgaagcgtatctccctcgacgaagcgatggcatccggtcatgtgaaagagc > 2:705197‑M1/1‑8 (MQ=255) gTGGCCCGgctgataccaacgtcactaaagtggtggaagacagggccaacgcactgctggccgatggcctgaaaggcgtgaagcgtatctccctcgacgaagcgatggcatccggtcatgtgaaa < 2:895677‑M1/125‑118 (MQ=255) gTGGCCCGgctgataccaacgtcactaaagtggtggaagacagggccaacgcactgctggccgatggcctgaaaggcgtgaagcgtatctccctcgacgaagcgatggcatccggtcatgtgaaa > 1:895677‑M1/1‑8 (MQ=255) ggCCCGgctgataccaacgtcactaaagtggtggaagacagggccaacgcactgctggccgatggcctgaaaggcgtgaagcgtatctccctcgacgaagcgatggcatccggtcatgtgaaagagcaggatctggtgca > 2:101856‑M1/1‑6 (MQ=255) gCCCGgctgataccaacgtcactaaagtggtggaagacagggccaacgcactgctggccgatggcctgaaaggcgtgaagcgtatctccctcgacgaagcgatggcatccggtcatgtgaaagagcaggatctggtgcag > 2:708542‑M1/1‑5 (MQ=255) cccGgctgataccaacgtcactaaagtggtggaagacagggccaacgcactgctggccgatggcctgaaaggcgtgaagcgtatctccctcgacgaagcgatggcatccggtcatgtgaaagagcaggatctggtgcagc > 2:577356‑M1/1‑4 (MQ=255) | GTCCGAACCTGCATTCATTTCCGTTCTGGAAGTGCTGGCAGCGAACGGCGTTGATGTCATTGTGCAGGAAAACAATGGCTTCACCCCGACGCCTGCCGTTTCCAATGCCATCCTGGTTCACAATAAAAAAGGTGGCCCGCTGGCAGACGGTATCGTGATTACACCGTCCCATAACCCGCCGGAAGATGGTGGAATCAAATACAATCCGCCAAATGGTGGCCCGGCTGATACCAACGTCACTAAAGTGGTGGAAGACAGGGCCAACGCACTGCTGG > NC_000913/713827‑714101 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |