Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 1,879,829 Δ1 bp :: IS186 (–) +6 bp :: Δ1 bp coding (115‑120/360 nt) yeaR ← DUF1971 domain‑containing protein YeaR

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1879829 =0 (0.000)55 (0.800) 39/272 0.5 100% coding (120/360 nt) yeaR DUF1971 domain‑containing protein YeaR
?NC_000913 2514274 = NA (NA)noncoding (2/1345 nt) IS186 repeat region
* ? NC_000913 = 18798340 (0.000)75 (1.100) 46/270 0.3 100% coding (115/360 nt) yeaR DUF1971 domain‑containing protein YeaR
?NC_000913 = 2515616 NA (NA)noncoding (1344/1345 nt) IS186 repeat region

Only 100 of 129 total aligned reads displayed.

TCAATGTTGTGCCACTTTTCTGGAGGGAACACCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACTGTGTTCATCAGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTCGAATATTCCGGCAGGTGCAGTTTGTTTATTCCAGAAAGGCGTTGAGCGCGTATGAATATAATTCTGTGGGATTTGAAGCATCCTTTTCCCTCCT  >  NC_000913/1879692‑1879961
                                                                                                                                         |                                                                                                                                    
tCAATGTTGTGCCACTTTTCTGGAGGGAACACCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACTGTGTTCATCAGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTa                                                                                                                                    <  1:713501/140‑1 (MQ=255)
      gccgaagtatccagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGTAAAcccc                                                                                                                              >  2:338891‑M1/132‑140 (MQ=255)
        gtgCCACTTTTCTGGAGGGAACACCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACTGTGTTCATCAGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACcccat                                                                                                                            >  1:665380‑M1/1‑135 (MQ=255)
        cgaagtatccagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGTAAACCCCCg                                                                                                                            <  2:303903‑M1/11‑1 (MQ=255)
         tgCCACTTTTCTGGAGGGAACACCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACTGTGTTCATCAGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACcccata                                                                                                                           <  1:780287‑M1/140‑7 (MQ=255)
           ccACTTTTCTGGAGGGAACACCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACTGTGTTCATCAGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACcccataag                                                                                                                         >  1:360313‑M1/1‑132 (MQ=255)
            cACTTTTCTGGAGGGAACACCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACTGTGTTCATCAGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACcccataagc                                                                                                                        <  2:360313‑M1/140‑10 (MQ=255)
             tatccagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGTAAACCCCCGGgcgc                                                                                                                       >  2:1087584‑M1/125‑140 (MQ=255)
             tatccagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGTAAACCCCCGGgcgc                                                                                                                       >  1:526418‑M1/125‑140 (MQ=255)
              cTTTTCTGGAGGGAACACCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACTGTGTTCATCAGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACcccataagcgc                                                                                                                      <  2:186156‑M1/140‑12 (MQ=255)
               ttttCTGGAGGGAACACCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACTGTGTTCATCAGCGTAGCCGGGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACcccataagcgct                                                                                                                     <  1:28326‑M1/140‑13 (MQ=255)
               ttttCTGGAGGGAACACCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACTGTGTTCATCAGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACcccataagcgct                                                                                                                     <  2:1135772‑M1/140‑13 (MQ=255)
                tttCTGGAGGGAACACCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACTGTGTTCATCAGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACcccataagcgcta                                                                                                                    >  2:1331‑M1/1‑127 (MQ=255)
                 cagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGTAAACCCCCGGGCGCGTTc                                                                                                                   >  1:230767‑M1/121‑140 (MQ=255)
                       ttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaatcccacaacccttaagttagcgcttatgggGTAAACCCCCGGGCGCGTTCCTTTAt                                                                                                             >  1:303903‑M1/115‑140 (MQ=255)
                        tcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGTAAACCCCCGGGCGCGTTCCTTTATc                                                                                                            >  1:268238‑M1/114‑140 (MQ=255)
                         cgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGTAAACCCCCGGGCGCGTTCCTTTATCa                                                                                                           <  1:1143920‑M1/28‑1 (MQ=255)
                           aaCACCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACTGTGTTCATCAGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACcccataagcgctaacttaagggtt                                                                                                         >  2:858659‑M1/1‑116 (MQ=255)
                             cttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGTAAACCCCCGGGCGCGTTCCTTTATCAAGAt                                                                                                       >  1:1100108‑M1/109‑140 (MQ=255)
                             cacCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACTGTGTTCATCAGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACcccataagcgctaacttaagggttga                                                                                                       <  1:858659‑M1/140‑27 (MQ=255)
                                cGCAAACTGCCCCGCTTCGCTAAGGATCACCTGATCAGGCTCTGCACTGTGTTCATCAGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACcccataagcgctaacttaagggttgaacc                                                                                                    >  1:754942‑M1/1‑111 (MQ=255)
                                 gCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACTGTGTTCATCAGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACcccataagcgctaacttaagggttgaacca                                                                                                   <  2:72204‑M1/140‑31 (MQ=255)
                                  cAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACTGTGTTCATCAGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACcccataagcgctaacttaagggttgaaccat                                                                                                  <  2:988559‑M1/140‑32 (MQ=255)
                                        gCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACTGTGTTCATCAGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACcccataagcgctaacttaagggttgaaccatctgaag                                                                                            <  1:899935‑M1/140‑38 (MQ=255)
                                          gccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTCGAatat                                                                                          <  2:239554‑M1/45‑1 (MQ=255)
                                          gccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTCGAatat                                                                                          <  1:955088‑M1/45‑1 (MQ=255)
                                          gccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTCGAatat                                                                                          <  1:819259‑M1/45‑1 (MQ=255)
                                           ccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTCGAATAtt                                                                                         <  1:1136020‑M1/46‑1 (MQ=255)
                                               aattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTCGAATATTCCgg                                                                                     >  1:89905‑M1/91‑140 (MQ=255)
                                                attgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTCGAATATTCCGGc                                                                                    <  2:659149‑M1/51‑1 (MQ=255)
                                                    tAAGGATCACCTGATCAGGCTCTGCACTGTGTTCATCAGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcct                                                                                <  2:749535‑M1/140‑50 (MQ=255)
                                                    ctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTCGAATATTCCGGCAGGt                                                                                >  1:412213‑M1/86‑140 (MQ=255)
                                                      aGGATCACCTGATCAGGCTCTGCACTGTGTTCATCAGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcg                                                                              <  2:754942‑M1/140‑52 (MQ=255)
                                                         cagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTCGAATATTCCGGCAGGTGCAgt                                                                           <  2:25098‑M1/60‑1 (MQ=255)
                                                          tCACCTGATCAGGCTCTGCACTGTGTTCATCAGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgc                                                                          <  1:599262‑M1/140‑56 (MQ=255)
                                                            aCCTGATCAGGCTCTGCACTGTGTTCATCAGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcct                                                                        >  1:1088648‑M1/1‑83 (MQ=255)
                                                              atcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTCGAATATTCCGGCAGGTGCAgtttgtt                                                                      >  2:231215‑M1/76‑140 (MQ=255)
                                                              atcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTCGAATATTCCGGCAGGTGCAgtttgtt                                                                      >  2:883140‑M1/76‑140 (MQ=255)
                                                                   cAGGCTCTGCACTGTGTTCATCAGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaag                                                                 >  1:278094‑M1/1‑76 (MQ=255)
                                                                   cAGGCTCTGCACTGTGTTCATCAGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaag                                                                 >  1:868823‑M1/1‑76 (MQ=255)
                                                                   cAGGCTCTGCACTGTGTTCATCAGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaag                                                                 >  1:474048‑M1/1‑76 (MQ=255)
                                                                      agtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTCGAATATTCCGGCAGGTGCAGTTTGTTTATTCCAg                                                              <  1:172929‑M1/73‑1 (MQ=255)
                                                                       gtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTCGAATATTCCGGCAGGTGCAGTTTGTTTATTCCAGa                                                             >  2:819259‑M1/67‑140 (MQ=255)
                                                                        tctGCACTGTGTTCATCAGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgat                                                            >  2:439572‑M1/1‑71 (MQ=255)
                                                                          tGCACTGTGTTCATCAGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtg                                                                           <  1:300902‑M1/123‑55 (MQ=255)
                                                                          tGCACTGTGTTCATCAGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtg                                                                           >  2:300902‑M1/1‑69 (MQ=255)
                                                                           gCACTGTGTTCATCAGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcc                                                         >  2:872663‑M1/1‑68 (MQ=255)
                                                                            cACTGTGTTCATCAGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcct                                                        >  2:395465‑M1/1‑67 (MQ=255)
                                                                             catcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTCGAATATTCCGGCAGGTGCAGTTTGTTTATTCCAGAAAGGCg                                                       >  1:40330‑M1/61‑140 (MQ=255)
                                                                             catcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTCGAATATTCCGGCAGGTGCAGTTTGTTTATTCCAGAAAGGCg                                                       >  1:184034‑M1/61‑140 (MQ=255)
                                                                                cggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTCGAATATTCCGGCAGGTGCAGTTTGTTTATTCCAGAAAGGCGTTg                                                    <  2:961970‑M1/83‑1 (MQ=255)
                                                                                cggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTCGAATATTCCGGCAGGCGCAGTTTGTTTATTCCAGAAAGGCGTTg                                                    <  1:566503‑M1/83‑1 (MQ=255)
                                                                                 tgtTCATCAGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgt                                                   >  2:619757‑M1/1‑62 (MQ=255)
                                                                                  gcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTCGAATATTCCGGCAGGTGCAGTTTGTTTATTCCAGAAAGGCGTTGAg                                                  >  2:1143920‑M1/56‑140 (MQ=255)
                                                                                  gcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTCGAATATTCCGGCAGGTGCAGTTTGTTTATTCCAGAAAGGCGTTGAg                                                  <  2:858327‑M1/85‑1 (MQ=255)
                                                                                  gcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTCGAATATTCCGGCAGGTGCAGTTTGTTTATTCCAGAAAGGCGTTGAg                                                  >  2:955088‑M1/56‑140 (MQ=255)
                                                                                    tcatcaGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaaggcgatgcctcgcgttct                                                >  2:266274‑M1/1‑59 (MQ=255)
                                                                                      atcaGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcg                                                      >  2:938318‑M1/1‑57 (MQ=255)
                                                                                      atcaGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcg                                                      <  1:938318‑M1/132‑76 (MQ=255)
                                                                                      atcaGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACcccataagccctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttc                                              >  1:992923‑M1/1‑57 (MQ=255)
                                                                                         aaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTCGAATATTCCGGCAGGTGCAGTTTGTTTATTCCAGAAAGGCGTTGAGCGCGTAt                                           >  2:515886‑M1/49‑140 (MQ=255)
                                                                                           cGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACcccataagcgctaacttaatggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattg                                         >  1:567972‑M1/1‑52 (MQ=255)
                                                                                           cGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattg                                         >  1:492733‑M1/1‑52 (MQ=255)
                                                                                           cGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattg                                         >  2:434102‑M1/1‑52 (MQ=255)
                                                                                           cGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattg                                         >  1:2137‑M1/1‑52 (MQ=255)
                                                                                           cGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattg                                         >  2:1066282‑M1/1‑52 (MQ=255)
                                                                                             catatcaggcgtaataccacaacccttaagttagcgcttatgggGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTCGAATATTCCGGCAGGTGCAGTTTGTTTATTCCAGAAAGGCGTTGAGCGCGt                                             <  2:459313‑M1/90‑1 (MQ=255)
                                                                                                      tatTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtagg                              <  2:1002479‑M1/140‑100 (MQ=255)
                                                                                                      cgtaataccacaacccttaagttagcgcttatgggGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTCGAATATTCCGGCAGGTGCAGTTTGTTTATTCCAGAAAGGCGTTGAGCGCGTATGAATATAATTCtg                              <  2:280634‑M1/105‑1 (MQ=255)
                                                                                                        tttGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggct                            <  1:311107‑M1/140‑102 (MQ=255)
                                                                                                        tttGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggct                            <  2:888818‑M1/140‑102 (MQ=255)
                                                                                                        tttGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggct                            <  2:758081‑M1/140‑102 (MQ=255)
                                                                                                        tttGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggct                            <  2:474048‑M1/140‑102 (MQ=255)
                                                                                                        tttGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggct                            <  2:868823‑M1/140‑102 (MQ=255)
                                                                                                          tGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgt                          <  1:872663‑M1/140‑104 (MQ=255)
                                                                                                              cGCCCCATGCATAACGGAAAGGCGTGGGTAAACcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagg                      >  2:232242‑M1/1‑33 (MQ=255)
                                                                                                                ccccATGCATAACGGAAAGGCGTGGGTAAACcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcaggga                    >  1:1090951‑M1/1‑31 (MQ=255)
                                                                                                                ccccATGCATAACGGAAAGGCGTGGGTAAACcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcaggga                    >  2:622704‑M1/1‑31 (MQ=255)
                                                                                                                ccccATGCATAACGGAAAGGCGTGGGTAAACcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcaggga                    >  1:760038‑M1/1‑31 (MQ=255)
                                                                                                                ccccATGCATAACGGAAAGGCGTGGGTAAACcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcaggga                    >  1:555257‑M1/1‑31 (MQ=255)
                                                                                                                ccccATGCATAACGGAAAGGCGTGGGTAAACcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggct                            >  1:321499‑M1/1‑31 (MQ=255)
                                                                                                                caacccttaagttagcgcttatgggGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTCGAATATTCCGGCAGGTGCAGTTTGTTTATTCCAGAAAGGCGTTGAGCGCGTATGAATATAATTCTGTGGGATTTGa                    <  1:793774‑M1/115‑1 (MQ=255)
                                                                                                                caacccttaagttagcgcttatgggGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTCGAATATTCCGGCAGGTGCAGTTTGTTTATTCCAGAAAGGCGTTGAGCGCGTATGAATATAATTCTGTGGGATTTGa                    <  1:423677‑M1/115‑1 (MQ=255)
                                                                                                                 cccATGCATAACGGAAAGGCGTGGGTAAACcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggat                   >  1:334589‑M1/1‑30 (MQ=255)
                                                                                                                  ccATGCATAACGGAAAGGCGTGGGTAAACcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggata                  <  1:1066282‑M1/140‑112 (MQ=255)
                                                                                                                  ccATGCATAACGGAAAGGCGTGGGTAAACcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggata                  <  2:334589‑M1/140‑112 (MQ=255)
                                                                                                                  acccttaagttagcgcttatgggGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTCGAATATTCCGGCAGGTGCAGTTTGTTTATTCCAGAAAGGCGTTGAGCGCGTATGAATATAATTCTGTGGGATTTGAAg                  >  2:423677‑M1/24‑140 (MQ=255)
                                                                                                                   cATGCATAACGGAAAGGCGTGGGTAAACcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggatac                 <  2:1090951‑M1/140‑113 (MQ=255)
                                                                                                                   cATGCATAACGGAAAGGCGTGGGTAAACcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggatac                 <  2:1088648‑M1/140‑113 (MQ=255)
                                                                                                                         tAACGGAAAGGCGTGGGTAAACcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggatactgtccc           <  2:760570‑M1/140‑119 (MQ=255)
                                                                                                                             agcgcttatgggGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTCGAATATTCCGGCAGGTGCAGTTTGTTTATTCCAGAAAGGCGTTGAGCGCGTATGAATATAATTCTGTGGGAt                        <  1:513282‑M1/111‑1 (MQ=255)
                                                                                                                             agcgcttatgggGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTCGAATATTCCGGCAGGTGCAGTTTGTTTATTCCAGAAAGGCGTTGAGCGCGTATGAATATAATTCTGTGGGAt                        >  2:513282‑M1/13‑123 (MQ=255)
                                                                                                                             agcgcttatgggGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTCGAATATTCCGGCAGGTGCAGTTTGTTTATTCCAGAAAGGCGTTGAGCGCGTATGAATATAATTCTGTGGGATTTGAAGCATCCTTTTcc       >  1:659149‑M1/13‑140 (MQ=255)
                                                                                                                               cgcttatgggGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTCGAATATTCCGGCAGGTGCAGTTTGTTTATTCCAGAAAGGCGTTGAGCGCGTATGAATATAATTCTGTGGGATTTGAAg                  >  1:447688‑M1/11‑127 (MQ=255)
                                                                                                                               cgcttatgggGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTCGAATATTCCGGCAGGTGCAGTTTGTTTATTCCAGAAAGGCGTTGAGCGCGTATGAATATAATTCTGTGGGATTTGAAGCATCCt            >  2:840970‑M1/11‑133 (MQ=255)
                                                                                                                               cgcttatgggGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTCGAATATTCCGGCAGGTGCAGTTTGTTTATTCCAGAAAGGCGTTGAGCGCGTATGAATATAATTCTGTGGGATTTGAAGCATCCt            <  1:840970‑M1/123‑1 (MQ=255)
                                                                                                                               cgcttatgggGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTCGAATATTCCGGCAGGTGCAGTTTGTTTATTCCAGAAAGGCGTTGAGCGCGTATGAATATAATTCTGTGGGATTTGAAGCATCCTTTTCcct     >  1:280634‑M1/11‑140 (MQ=255)
                                                                                                                               aaaGGCGTGGGTAAACcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggatactgtcccacgaat     >  1:987954‑M1/1‑16 (MQ=255)
                                                                                                                               aaaGGCGTGGGTAAACcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggatactgtcccacgaat     >  2:252911‑M1/1‑16 (MQ=255)
                                                                                                                                  ggCGTGGGTAAACcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggatactgtcccacgaatggc  <  1:1164020‑M1/140‑128 (MQ=255)
                                                                                                                                         |                                                                                                                                    
TCAATGTTGTGCCACTTTTCTGGAGGGAACACCGCAAACTGCCCCGCTTCGATAAGGATCACCTGATCAGGCTCTGCACTGTGTTCATCAGCGTAGCCGAGATATTTGACCGCCCCATGCATAACGGAAAGGCGTGGGTAAACCCCCGGGCGCGTTCCTTTATCAAGATGACGTTCGAATATTCCGGCAGGTGCAGTTTGTTTATTCCAGAAAGGCGTTGAGCGCGTATGAATATAATTCTGTGGGATTTGAAGCATCCTTTTCCCTCCT  >  NC_000913/1879692‑1879961

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.