BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,727,566	(A)_7→6	coding (183/342 nt)	yiaB ←	conserved inner membrane protein YiaB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,727,560	0	A	.	100.0%	542.7 / NA	125	coding (189/342 nt)	yiaB	conserved inner membrane protein YiaB
Reads supporting (aligned to +/- strand): ref base A (0/0); new base . (55/70); total (55/70)

Only 100 of 134 total aligned reads displayed.

ACAAACGCATTTGACCAAACAAGCAGACAAAAAAGGCGATGGGATAGATCACCATTTCATAAGTATTGATAGGTGCGTTTAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGTAAAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCATTAACACGCCAAGAAAATAGCCTTTTCCACTTAACAATGGGCATGAGATCCATAGCCCAACCAGATA  >  NC_000913/3727421‑3727694

acaaacGCATTTGACCAAACAAGCAGACAAAAAAGGCGATGGGATAGATCACCATTTCATAAGTATTGATAGGTGCGTTTAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACAGGCAGATATGGGTa                                                                                                                                        <  1:579773/140‑1 (MQ=255)

acaaacGCATTTGACCAAACAAGCAGACAAAAAAGGCGATGGGATAGATCACCATTTCATAAGTATTGATAGGTGCGTTTAAA‑‑ACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGTaaa                                                                                                                                      <  2:714358/140‑1 (MQ=255)

  aaacGCATTTGACCAAACAAGCAGACAAAAAAGGCGATGGGATAGATCACCATTTCATAAGTATTGATAGGTGCGTTTAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGTaaa                                                                                                                                      <  1:164439/140‑1 (MQ=255)

         tttGACCAAACAAGCAGACAAAAAAGGCGATGGGATAGATCACCATTTCATAAGTATTGATAGGTGCGTTTAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGTaaaaaatcat                                                                                                                               >  1:181215/1‑136 (MQ=255)

         tttGACCAAACAAGCAGACAAAAAAGGCGATGGGATAGATCACCATTTCATAAGTATTGATAGGTGCGTTTAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGTaaaaaatcat                                                                                                                               >  2:895177/1‑136 (MQ=255)

         tttGACCAAACAAGCAGACAAAAAAGGCGATGGGATAGATCACCATTTCATAAGTATTGATAGGTGCGTTTAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGTaaa                                                                                                                                      <  2:898162/133‑1 (MQ=255)

         tttGACCAAACAAGCAGACAAAAAAGGCGATGGGATAGATCACCATTTCATAAGTATTGATAGGTGCGTTTAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGTaaa                                                                                                                                      >  1:898162/1‑133 (MQ=255)

          ttGACCAAACAAGCAGACAAAAAAGGCGATGGGATAGATCACCATTTCATAAGTATTGATAAGTGCGTTTAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGTa                                                                                                                                        >  2:60176/1‑130 (MQ=255)

          ttGACCAAACAAGCAGACAAAAAAGGCGATGGGATAGATCACCATTTCATAAGTATTGATAAGTGCGTTTAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGTa                                                                                                                                        <  1:60176/130‑1 (MQ=255)

                 aaCAAGCAGACAAAAAAGGCGATGGGATAGATCACCATTTCATAAGTATTGATAGGTGCGTTTAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGc                                                                                                                      <  2:640599/140‑1 (MQ=255)

                  aCAAGCAGACAAAAAAGGCGATGGGATAGATCACCATTTCATAAGTATTGATAGGTGCGTTTAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGcc                                                                                                                     >  1:986749/1‑140 (MQ=255)

                   cAAGCAGACAAAAAAGGCGATGGGATAGATCACCATTTCATAAGTATTGATAGGTGCGTTTAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGccc                                                                                                                    <  2:931061/140‑1 (MQ=255)

                       cAGACAAAAAAGGCGATGGGATAGATCACCATTTCATAAGTATTGATAGGTGCGTTTAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGt                                                                                                                >  1:820098/1‑140 (MQ=255)

                                aaGGCGATGGGATAGATCACCATTTCATAAGTATTGATAGGTGCGTTTAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTgcg                                                                                                       <  1:450820/140‑1 (MQ=255)

                                aaGGCGATGGGATAGATCACCATTTCATAAGTATTGATAGGTGCGTTTAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTgcg                                                                                                       <  2:126022/140‑1 (MQ=255)

                                aaGGCGATGGGATAGATCACCATTTCATAAGTATTGATAGGTGCGTTTAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTgcg                                                                                                       <  1:786558/140‑1 (MQ=255)

                                  ggCGATGGGATAGATCACCATTTCATAAGTATTGATAGGTGCGTTTAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGcgcg                                                                                                     <  2:446617/140‑1 (MQ=255)

                                  ggCGATGGGATAGATCACCATTTCATAAGTATTGATAGGTGCGTTTAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGcgcg                                                                                                     <  2:181215/140‑1 (MQ=255)

                                  ggCGATGGGATAGATCACCATTTCATAAGTATTGATAGGTGCGTTTAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGcgcg                                                                                                     <  1:952798/140‑1 (MQ=255)

                                  ggCGATGGGATAGATCACCATTTCATAAGTATTGATAGGTGCGTTTAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGcgcg                                                                                                     <  1:375740/140‑1 (MQ=255)

                                   gCGATGGGATAGATCACCATTTCATAAGTATTGATAGGTGCGTTTAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGa                                                                                                    <  2:467715/140‑1 (MQ=255)

                                    cGATGGGATAGATCACCATTTCATAAGTATTGATAGGTGCGTTTAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGcgcg                                                                                                     >  1:806698/1‑138 (MQ=255)

                                    cGATGGGATAGATCACCATTTCATAAGTATTGATAGGTGCGTTTAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGcgcg                                                                                                     <  2:806698/138‑1 (MQ=255)

                                    cGATGGGATAGATCACCATTTCATAAGTATTGATAGGTGCGTTTAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGaa                                                                                                   <  1:477295/140‑1 (MQ=255)

                                    cGATGGGATAGATCACCATTTCATAAGTATTGATAGGTGCGTTTAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGaa                                                                                                   <  2:464638/140‑1 (MQ=255)

                                    cGATGGGATAGATCACCATTTCATAAGTATTGATAGGTGCGTTTAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGaa                                                                                                   <  1:586339/140‑1 (MQ=255)

                                     gATGGGATAGATCACCATTTCATAAGTATTGATAGGTGCGTTTAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAg                                                                                                  <  1:579828/140‑1 (MQ=255)

                                         ggATAGATCACCATTTCATAAGTATTGATAGGTGCGTTTAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGcgcg                                                                                                     <  2:1076731/133‑1 (MQ=255)

                                         ggATAGATCACCATTTCATAAGTATTGATAGGTGCGTTTAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGcgcg                                                                                                     >  1:1076731/1‑133 (MQ=255)

                                                 cACCATTTCATAAGTATTGATAGGTGCGTTTAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGtt                                                                                      >  1:543199/1‑140 (MQ=255)

                                                   ccATTTCATAAGTATTGATAGGTGCGTTTAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGc                                                                                    >  2:863901/1‑140 (MQ=255)

                                                   ccATTTCATAAGTATTGATAGGTGCGTTTAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGc                                                                                    >  1:727714/1‑140 (MQ=255)

                                                    cATTTCATAAGTATTGATAGGTGCGTTTAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGct                                                                                   >  2:127738/1‑139 (MQ=255)

                                                    cATTTCATAAGTATTGATAGGTGCGTTTAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGcc                                                                                   >  1:684375/1‑140 (MQ=255)

                                                    cATTTCATAAGTATTGATAGGTGCGTTTAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGcc                                                                                   >  2:837131/1‑140 (MQ=255)

                                                         cATAAGTATTGATAGGTGCGTTTAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAg                                                                              >  1:974257/1‑140 (MQ=255)

                                                            aaGTATTGATAGGTGCGTTTAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTg                                                                           <  2:229886/140‑1 (MQ=255)

                                                              gTATTGATAGGTGCGTTTAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCt                                                                         <  2:24153/140‑1 (MQ=255)

                                                                 ttGATAGGTGCGTTTAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTg                                                                           >  2:431970/1‑135 (MQ=255)

                                                                 ttGATAGGTGCGTTTAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTg                                                                           <  1:431970/135‑1 (MQ=255)

                                                                 ttGATAGGTGCGTTTAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTc                                                                      >  1:251443/1‑140 (MQ=255)

                                                                  tGATAGGTGCGTTTAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCa                                                                     >  1:630126/1‑140 (MQ=255)

                                                                   gATAGGTGCGTTTAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCAt                                                                    >  2:1128144/1‑140 (MQ=255)

                                                                      aGGTGCGTTTAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCATTaa                                                                 <  1:1141138/140‑1 (MQ=255)

                                                                      aGGTGCGTTTAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCATTaa                                                                 <  2:728040/140‑1 (MQ=255)

                                                                         tGCGTTTAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCATTAacac                                                              >  2:27127/1‑140 (MQ=255)

                                                                         tGCGTTTAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCATTAacac                                                              >  2:130495/1‑140 (MQ=255)

                                                                         tGCGTTTAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCATTAacac                                                              >  2:1137346/1‑140 (MQ=255)

                                                                         tGCGTTTAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCATTAacac                                                              >  2:309633/1‑140 (MQ=255)

                                                                         tGCGTTTAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCATTAacac                                                              >  1:527877/1‑140 (MQ=255)

                                                                         tGCGTTTAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCATTAacac                                                              >  2:365098/1‑140 (MQ=255)

                                                                         tGCGTTTAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCATTAacac                                                              <  1:837131/140‑1 (MQ=255)

                                                                           cGTTTAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCATTAACACGc                                                            >  1:47239/1‑140 (MQ=255)

                                                                           cGTTTAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCATTAACACGc                                                            <  2:684375/140‑1 (MQ=255)

                                                                           cGTTTAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCATTAACACGc                                                            >  2:194394/1‑140 (MQ=255)

                                                                            gTTTAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCATTAACACGcc                                                           <  1:1005643/140‑1 (MQ=255)

                                                                            gTTTAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCATTAACACGcc                                                           <  1:1128144/140‑1 (MQ=255)

                                                                             tttAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCATTAACACGCCa                                                          >  1:752319/1‑140 (MQ=255)

                                                                             tttAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCATTAACACGCCa                                                          <  2:974257/140‑1 (MQ=255)

                                                                              ttAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCATTAACACGCCaa                                                         >  2:1083362/1‑140 (MQ=255)

                                                                                   acacCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCATTAACACGCCAAGaaaa                                                    <  1:134354/140‑1 (MQ=255)

                                                                                     acCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCATTAACACGCCAAGAAAATa                                                  >  2:268560/1‑140 (MQ=255)

                                                                                     acCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCATTAACACGCCAAGAAAATa                                                  >  1:997983/1‑140 (MQ=255)

                                                                                       cGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCATTAACACGCCAAGAAAATAGc                                                >  2:517554/1‑140 (MQ=255)

                                                                                            aaCAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCATTAACACGCCAAGAAAATAGCCtttt                                           <  1:895177/140‑1 (MQ=255)

                                                                                            aaCAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCATTAACACGCCAAGAAAATAGCCtttt                                           <  1:482758/140‑1 (MQ=255)

                                                                                             aCAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCATTAACACGCCAAGAAAATAGCCTTTTc                                          <  2:887266/140‑1 (MQ=255)

                                                                                              cAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCATTAACACGCCAAGAAAATAGCCtt                                             >  2:802703/1‑136 (MQ=255)

                                                                                              cAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCATTAACACGCCAAGAAAATAGCCtt                                             <  1:802703/136‑1 (MQ=255)

                                                                                                agagACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCATTAACACGCCAAGAAAATAGCCTTTTCCAc                                       <  1:906553/140‑1 (MQ=255)

                                                                                                 gagaCCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCATTAACACGCCAAGAAAATAGCCtttt                                           <  2:275944/135‑1 (MQ=255)

                                                                                                 gagaCCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCATTAACACGCCAAGAAAATAGCCtttt                                           >  1:615289/1‑135 (MQ=255)

                                                                                                 gagaCCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCATTAACACGCCAAGAAAATAGCCtttt                                           <  2:615289/135‑1 (MQ=255)

                                                                                                 gagaCCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCATTAACACGCCAAGAAAATAGCCTTTTCCACt                                      <  2:251443/140‑1 (MQ=255)

                                                                                                 gagaCCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCATTAACACGCCAAGAAAATAGCCTTTTCCACt                                      <  2:47239/140‑1 (MQ=255)

                                                                                                   gaCCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCATTAACACGCCAAGAAAATAGCCTTTTCCACTTa                                    >  1:856988/1‑140 (MQ=255)

                                                                                                    aCCGATAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCATTAACACGCCAAGAAAATAGCCTTTTCCACTTaa                                   >  2:174723/1‑140 (MQ=255)

                                                                                                       tcttgTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCATTAACACGCCAAGAAAATAGCCTTTTCCACTTAACaa                                <  2:519512/136‑1 (MQ=255)

                                                                                                        aTAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCATTAACACGCCAAGAAAATAGCCTTTTCCACTTAACAAt                               <  1:268560/140‑1 (MQ=255)

                                                                                                        aTAGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCATTAACACGCCAAGAAAATAGCCTTTTCCACTTAACAAt                               >  2:760542/1‑140 (MQ=255)

                                                                                                          aGTGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCATTAACACGCCAAGAAAATAGCCTTTTCCACTTAACAATgg                             <  2:752319/140‑1 (MQ=255)

                                                                                                            tGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCATTAACACGCCAAGAAAATAGCCTTTTCCACTTAACAATGGGc                           <  1:1152669/140‑1 (MQ=255)

                                                                                                            tGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCATTAACACGCCAAGAAAATAGCCTTTTCCACTTAACAATGGGc                           <  2:543199/140‑1 (MQ=255)

                                                                                                            tGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCATTAACACGCCAAGAAAATAGCCTTTTCCACTTAACAATGGGc                           <  1:720012/140‑1 (MQ=255)

                                                                                                            tGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCATTAACACGCCAAGAAAATAGCCTTTTCCACTTAACAATGGGc                           <  2:382953/140‑1 (MQ=255)

                                                                                                            tGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCATTAACACGCCAAGAAAATAGCCTTTTCCACTTAACAATGGGc                           <  1:27127/140‑1 (MQ=255)

                                                                                                            tGATTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCATTAACACGCCAAGAAAATAGCCTTTTCCACTTAACAATGGGc                           <  1:865154/140‑1 (MQ=255)

                                                                                                              aTTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCATTAACACGCCAAGAAAATAGCCTTTTCCACTTAACAATGGGc                           >  2:751304/1‑138 (MQ=255)

                                                                                                              aTTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCATTAACACGCCAAGAAAATAGCCTTTTCCACTTAACAATGGGc                           <  1:751304/138‑1 (MQ=255)

                                                                                                              aTTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCATTAACACGCCAAGAAAATAGCCTTTTCCACTTAACAATGGGCAt                         <  2:630126/140‑1 (MQ=255)

                                                                                                              aTTAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTAATTAACACGCCAAGAAAATAGCCTTTTCCACTTAACAATGGGc                           <  2:568165/138‑1 (MQ=255)

                                                                                                               ttAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCATTAACACGCCAAGAAAATAGCCTTTTCCACTTAACAATGGGCATg                        <  1:552211/140‑1 (MQ=255)

                                                                                                                tAACGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCATTAACACGCCAAGAAAATAGCCTTTTCCACTTAACAATGGGCATga                       <  2:527877/140‑1 (MQ=255)

                                                                                                                 aaCGCAACTAACTGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCATTAACACGCCAAGAAAATAGCCTTTTCCACTTAACAATGGGCATgag                      <  1:287790/140‑1 (MQ=255)

                                                                                                                        ctaactGGCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCATTAACACGCCAAGAAAATAGCCTTTTCCACTTAACa                                 >  1:410288/1‑122 (MQ=255)

                                                                                                                              ggCAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCATTAACACGCCAAGAAAATAGCCTTTTCCACTTAACAATGGGCATGAGATCCATAGCCCaa         <  1:365098/140‑1 (MQ=255)

                                                                                                                                cAGATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCATTAACACGCCAAGAAAATAGCCTTTTCCACTTAACAATGGGCATGAGATCCATAGCCCAAcc       >  2:418058/1‑140 (MQ=255)

                                                                                                                                  gATATGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCATTAACACGCCAAGAAAATAGCCTTTTCCACTTAACAATGGGCATGAGATCCATAGCCCAACCAg     >  1:1010343/1‑140 (MQ=255)

                                                                                                                                     atGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCATTAACACGCCAAGAAAATAGCCTTTTCCACTTAACAATGGGCATGAGATCCATAGCCCAACCAGATa  <  2:727714/140‑1 (MQ=255)

                                                                                                                                     atGGGT‑AAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCATTAACACGCCAAGAAAATAGCCTTTTCCACTTAACAATGGGCATGAGATCCATAGCCCAACCAGATa  <  2:856988/140‑1 (MQ=255)

ACAAACGCATTTGACCAAACAAGCAGACAAAAAAGGCGATGGGATAGATCACCATTTCATAAGTATTGATAGGTGCGTTTAAAACACCGATAAACAAGAGACCGATAGTGATTAACGCAACTAACTGGCAGATATGGGTAAAAAAATCATCCAGTTGCCCGAGTTTTTCTGCGCGAAGATATGCATAGTTGCCAAAAGTTGCTGTCATTAACACGCCAAGAAAATAGCCTTTTCCACTTAACAATGGGCATGAGATCCATAGCCCAACCAGATA  >  NC_000913/3727421‑3727694

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`