BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,002,433	T→A	T123S (ACC→TCC)	yigF ←	DUF2628 domain‑containing protein YigF

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,002,433	0	T	A	100.0%	313.4 / NA	99	T123S (ACC→TCC)	yigF	DUF2628 domain‑containing protein YigF
Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (51/48); total (51/48)

Only 100 of 101 total aligned reads displayed.

GGCTACCCTGGCGCGATTATCTTTATGATCCTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGCCAATTAGTGCACCAACAAATAGAGATAGAATACCAAGTAATAGAA  >  NC_000913/4002296‑4002567

ggCTACCCTGGCGCGATTATCTTTATGATCCTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAAt                                                                                                                                      >  1:446740/1‑140 (MQ=255)

  cTACCCTGGCGCGATTATCTTTATGATCCTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAAttt                                                                                                                                    <  2:842019/140‑1 (MQ=255)

  cTACCCTGGCGCGATTATCTTTATGATCCTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAAttt                                                                                                                                    <  1:241165/140‑1 (MQ=255)

    aCCCTGGCGCGATTATCTTTATGATCCTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTaa                                                                                                                                  <  2:208401/140‑1 (MQ=255)

      ccTGGCGCGATTATCTTTATGATCCTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAAcc                                                                                                                                >  2:293246/1‑140 (MQ=255)

      ccTGGCGCGATTATCTTTATGATCCTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAAcc                                                                                                                                >  1:340406/1‑140 (MQ=255)

      ccTGGCGCGATTATCTTTATGATCCTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTC‑GGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAAccc                                                                                                                               >  1:790699/1‑140 (MQ=255)

        tGGCGCGATTATCTTTATGATCCTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCt                                                                                                                              <  2:340406/140‑1 (MQ=255)

         ggCGCGATTATCTTTATGATCCTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCtt                                                                                                                             <  2:768231/140‑1 (MQ=255)

          gcgcGATTATCTTTATGATCCTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCttt                                                                                                                            <  1:81030/140‑1 (MQ=255)

           cgcgATTATCTTTATGATCCTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCtttt                                                                                                                           >  2:829216/1‑140 (MQ=255)

             cgATTATCTTTATGATCCTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTAc                                                                                                                         <  1:64757/140‑1 (MQ=255)

               aTTATCTTTATGATCCTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACct                                                                                                                       >  1:164414/1‑140 (MQ=255)

               aTTATCTTTATGATCCTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACct                                                                                                                       >  2:613543/1‑140 (MQ=255)

                   tCTTTATGATCCTCGCGGGTCTGGCACCGTAGCTGTATTTTAAGCGGAAGAGCTAGTTGTAAAAACCGAGATCTGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAACGCGGCAGGAATTTGACCCTGTTGCcactct                                                                                                                   <  2:599244/140‑3 (MQ=255)

                       tATGATCCTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCa                                                                                                               >  2:941326/1‑140 (MQ=255)

                        aTGATCCTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGTAATTTAACCCTTTTACCTCTTTCTCAt                                                                                                              <  2:246175/140‑1 (MQ=255)

                             ccTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTATAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAAc                                                                                                         >  1:1091514/1‑140 (MQ=255)

                              cTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCttt                                                                                                                   >  2:565300/1‑129 (MQ=255)

                              cTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCttt                                                                                                                   <  1:565300/129‑1 (MQ=255)

                               tCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCa                                                                                                       >  1:128959/1‑140 (MQ=255)

                                cgcgGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCAt                                                                                                      >  2:1081945/1‑140 (MQ=255)

                                 gcgGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCAtt                                                                                                     >  2:320751/1‑140 (MQ=255)

                                   gggCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTg                                                                                                   >  2:337181/1‑140 (MQ=255)

                                   gggCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTg                                                                                                   >  1:730555/1‑140 (MQ=255)

                                   gggCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTg                                                                                                   <  1:337181/140‑1 (MQ=255)

                                      ccTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGaa                                                                                                          >  2:20992/1‑130 (MQ=255)

                                      ccTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGaa                                                                                                          <  1:20992/130‑1 (MQ=255)

                                      ccTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTc                                                                                                >  1:850293/1‑140 (MQ=255)

                                      ccTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTc                                                                                                >  2:946024/1‑140 (MQ=255)

                                         ggCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCgtg                                                                                             >  2:273506/1‑140 (MQ=255)

                                          gCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCgtgt                                                                                            >  2:693900/1‑140 (MQ=255)

                                           cACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGtt                                                                                           <  1:941326/140‑1 (MQ=255)

                                           cACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGtt                                                                                           <  1:693900/140‑1 (MQ=255)

                                             ccGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTaa                                                                                         <  2:1081666/140‑1 (MQ=255)

                                               gTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACa                                                                                       <  1:946024/140‑1 (MQ=255)

                                                tATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAg                                                                                      <  2:660255/140‑1 (MQ=255)

                                                tATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAg                                                                                      >  1:961142/1‑140 (MQ=255)

                                                tATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAg                                                                                      <  2:128959/140‑1 (MQ=255)

                                                 aTCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGc                                                                                     <  2:730555/140‑1 (MQ=255)

                                                        cTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAg                                                                              >  2:1034201/1‑140 (MQ=255)

                                                           tAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTaa                                                                                         <  2:678260/126‑1 (MQ=255)

                                                           tAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTaa                                                                                         >  1:678260/1‑126 (MQ=255)

                                                           tAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGgct                                                                           >  2:511912/1‑140 (MQ=255)

                                                           tAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGgct                                                                           >  1:566626/1‑140 (MQ=255)

                                                              gCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGgctgct                                                                        >  2:590144/1‑140 (MQ=255)

                                                               cGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTa                                                                       <  1:643986/140‑1 (MQ=255)

                                                                 gaagaaCTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACg                                                                     >  2:854067/1‑140 (MQ=255)

                                                                     aaCTGGTTATAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCaa                                                                 <  2:1091514/140‑1 (MQ=255)

                                                                       cTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAAtt                                                               >  2:803753/1‑140 (MQ=255)

                                                                         ggTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTcc                                                             <  2:164414/140‑1 (MQ=255)

                                                                         ggTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTcc                                                             <  1:1034201/140‑1 (MQ=255)

                                                                               aaaaaaCGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAAt                                                       >  2:778012/1‑140 (MQ=255)

                                                                                 aaaaCGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGt                                                     <  2:446740/140‑1 (MQ=255)

                                                                                   aaCGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTa                                                   <  1:293246/140‑1 (MQ=255)

                                                                                    aCGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTaa                                                  <  2:961142/140‑1 (MQ=255)

                                                                                        gagCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGcc                                              >  2:329750/1‑140 (MQ=255)

                                                                                        gagCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGcc                                              <  2:566626/140‑1 (MQ=255)

                                                                                         agCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGCCa                                             >  2:1068902/1‑140 (MQ=255)

                                                                                             gTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGCCAATTa                                         >  1:86230/1‑140 (MQ=255)

                                                                                                gCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGCCAATTAGTg                                      >  2:887014/1‑140 (MQ=255)

                                                                                                gCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGCCAATTAGTg                                      <  2:850293/140‑1 (MQ=255)

                                                                                                  ttAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGCCAATTAGTGCa                                    <  2:481941/140‑1 (MQ=255)

                                                                                                  ttAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGCCAATTAGTGCa                                    <  1:829216/140‑1 (MQ=255)

                                                                                                  ttAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGCCAATTAGTGCa                                    <  1:320751/140‑1 (MQ=255)

                                                                                                  ttAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGCCAATTAGTGCa                                    <  1:1081945/140‑1 (MQ=255)

                                                                                                  ttAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGCCAATTAGTGCa                                    <  1:1068902/140‑1 (MQ=255)

                                                                                                      tCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGCCAATTAGTGCACcaa                                <  1:887014/140‑1 (MQ=255)

                                                                                                          gCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATATAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGCCAATTAGTGCACCAACaaa                            >  1:457832/1‑140 (MQ=255)

                                                                                                          gCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGCCAATTAGTGCACcaa                                <  2:1075128/136‑1 (MQ=255)

                                                                                                          gCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGCCAATTAGTGCACcaa                                >  1:1075128/1‑136 (MQ=255)

                                                                                                          gCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGCCAATTAGTGCACCAACaaa                            >  2:127154/1‑140 (MQ=255)

                                                                                                          gCTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGCCAATTAGTGCACCAACaaa                            >  2:1035759/1‑140 (MQ=255)

                                                                                                           cTAAGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGCCAATTAGTGCACCAACAAAt                           <  1:992995/140‑1 (MQ=255)

                                                                                                             aaGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGCCAATTAGTGCACCAACAAATag                         <  1:863789/140‑1 (MQ=255)

                                                                                                             aaGCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGCCAATTAGTGCACCAACAAATag                         <  1:511912/140‑1 (MQ=255)

                                                                                                               gCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGCCAATTAGTGCACCAACAAATagag                       >  1:1133873/1‑140 (MQ=255)

                                                                                                               gCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGCCAATTAGTGCACCAACAAATagag                       >  1:861145/1‑140 (MQ=255)

                                                                                                               gCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGCCAATTAGTGCACCAACAAATagag                       <  1:273506/140‑1 (MQ=255)

                                                                                                               gCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGCCAATTAGTGCACCAACAAATagag                       >  1:777718/1‑140 (MQ=255)

                                                                                                               gCCACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGCCAATTAGTGCACCAACAAATagag                       >  2:241475/1‑140 (MQ=255)

                                                                                                                ccACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGCCAATTAGTGCACCAACAAATAgaga                      >  2:219402/1‑140 (MQ=255)

                                                                                                                ccACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGCCAATTAGTGCACCAACAAATAgaga                      <  1:778012/140‑1 (MQ=255)

                                                                                                                 cACCTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTGACGCCAATTAGTGCACCAACAAATAGAGAt                     <  1:854067/140‑1 (MQ=255)

                                                                                                                    cTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGCCAATTAGTGCACCAACAAATAGAGATAGa                  >  2:563380/1‑140 (MQ=255)

                                                                                                                    cTGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGCCAATTAGTGCACCAACAAATAGAGATAGa                  >  2:679764/1‑140 (MQ=255)

                                                                                                                     tGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGCCAATTAGTGCACCAACAAATAGAGATAGaa                 <  1:679764/140‑1 (MQ=255)

                                                                                                                     tGTTATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGCCAATTAGTGCACCAACAAATAGAGATAGaa                 <  1:590144/140‑1 (MQ=255)

                                                                                                                       ttATTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGCCAATTAGTGCACCAACAAATAGAGATAGAATa               <  1:219402/140‑1 (MQ=255)

                                                                                                                         aTTCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGCCAATTAGTGCACCAACAAATAGAGATAGAATAcc             >  2:643797/1‑140 (MQ=255)

                                                                                                                          ttCAAAGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGCCAATTAGTGCACCAACAAATAGAGATAGAATACCa            <  1:643797/140‑1 (MQ=255)

                                                                                                                             aaaGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGCCAATTAGTGCACCAACAAATAGAGATAGAATACCAAGt         >  1:369543/1‑140 (MQ=255)

                                                                                                                               aGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGCCAATTAGTGCACCAACAAATag                         <  1:99228/122‑1 (MQ=255)

                                                                                                                               aGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGCCAATTAGTGCACCAACAAATag                         >  2:99228/1‑122 (MQ=255)

                                                                                                                               aGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGCCAATTAGTGCACCAACAAATAGAGATAGAATACCa            <  2:834365/135‑1 (MQ=255)

                                                                                                                               aGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGCCAATTAGTGCACCAACAAATAGAGATAGAATACCa            >  1:834365/1‑135 (MQ=255)

                                                                                                                               aGGCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGCCAATTAGTGCACCAACAAATAGAGATAGAATACCAAGTaa       <  1:563380/140‑1 (MQ=255)

                                                                                                                                ggCTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGCCAATTAGTGCACCAACAAATAGAGATAGAATACCAAGTAAt      >  1:114710/1‑140 (MQ=255)

                                                                                                                                  cTCCAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGCCAATTAGTGCACCAACAAATAGAGATAGAATACCAAGTAATAg    <  1:803753/140‑1 (MQ=255)

                                                                                                                                    ccAGGAATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGCCAATTAGTGCACCAACAAATAGAGATAGAATACCAAGTAATAGaa  >  1:48564/1‑140 (MQ=255)

GGCTACCCTGGCGCGATTATCTTTATGATCCTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAAAAAACGAGAGCGGTGGCTTAGTCTGGCTAAGCCACCTGTTATTCAAAGGCTCCAGGTATTTAACCCTTTTACCTCTTTCTCATAGAACCATTTGTTCGTGTTAACAGCAACATAGGCTGCTACGGCAATTCCCAGAATGTTAACGCCAATTAGTGCACCAACAAATAGAGATAGAATACCAAGTAATAGAA  >  NC_000913/4002296‑4002567

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`