New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | 1827135 = | 44 (0.620) | 4 (0.060) | 4/262 | 6.0 | 9.0% | coding (1125/1344 nt) | astB | N‑succinylarginine dihydrolase |
? | NC_000913 | = 1827131 | 39 (0.580) | coding (1129/1344 nt) | astB | N‑succinylarginine dihydrolase | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below/above cutoff threshold. |
GCTTCCCGCCCTTCGCGCAGCAATTGCGGGTCGGCCAGATCGGCAGCAGTAAGGCGATCGCGGTAGTAACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCTAATCGGGTTGTCAGCGGCAAGGAGTTCATTGAGATAACCCCATAC > NC_000913/1826992‑1827269 | gCTTCCCGCCCTTCGCGCAGCAATTGCGGGTCGGCCAGATCGGCAGCAGTAAGGCGATCGCGGTAGTAACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCg > 2:469154/1‑140 (MQ=255) gCTTCCCGCCCTTCGCGCAGCAATTGCGGGTCGGCCAGATCGGCAGCAGTAAGGCGATCGCGGTAGTAACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCg > 1:1479/1‑140 (MQ=255) ttCCCGCCCTTCGCGCAGCAATTGCGGGTCGGCCAGATCGGCAGCAGTAAGGCGATCGCGGTAGTAACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGtt < 1:986567/140‑1 (MQ=255) tCCCGCCCTTCGCGCAGCAATTGCGGGTCGGCCAGATCGGCAGCAGTAAGGCGATCGCGGTAGTAACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCg > 1:132560/1‑137 (MQ=255) tCCCGCCCTTCGCGCAGCAATTGCGGGTCGGCCAGATCGGCAGCAGTAAGGCGATCGCGGTAGTAACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCg < 2:132560/137‑1 (MQ=255) ccGCCCTTCGCGCAGCAATTGCGGGTCGGCCAGATCGGCAGCAGTAAGGCGATCGCGGTAGTAACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTAACCGCCCGGCGttctt > 2:209173/1‑140 (MQ=255) gCCCTTCGCGCAGCAATTGCGGGTCGGCCAGATCGGCAGCAGTAAGGCGATCGCGGTAGTAACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGttcttct < 2:889209/140‑1 (MQ=255) gCCCTTCGCGCAGCAATTGCGGGTCGGCCAGATCGGCAGCAGTAAGGCGATCGCGGTAGTAACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGttcttct < 1:69468/140‑1 (MQ=255) gCCCTTCGCGCAGCAATTGCGGGTCGGCCAGATCGGCAGCAGTAAGGCGATCGCGGTAGTAACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGttcttct < 2:1026626/140‑1 (MQ=255) gCCCTTCGCGCAGCAATTGCGGGTCGGCCAGATCGGCAGCAGTAAGGCGATCGCGGTAGTAACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTAACCGCCCGGCGttcttct < 1:209173/140‑1 (MQ=255) ttCGCGCAGCAATTGCGGGTCGGCCAGATCGGCAGCAGTAAGGCGATCGCGGTAGTAACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTg > 2:817157/1‑140 (MQ=255) cgcgCAGCAATTGCGGGTCGGCCAGATCGGCAGCAGTAAGGCGATCGCGGTAGTAACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGttcttctgtcaat > 2:188831/1‑134 (MQ=255) agcaATTGCGGGTCGGCCAGATCGGCAGCAGTAAGGCGATCGCGGTAGTAACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATac < 2:1189896/140‑1 (MQ=255) gCGGGTCGGCCAGATCGGCAGCAGTAAGGCGATCGCGGTAGTAACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGc < 1:469154/140‑1 (MQ=255) ggTCGGCCAGATCGGCAGCAGTAAGGCGATCGCGGTAGTAACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAAc < 1:302146/140‑1 (MQ=255) tCGGCCAGATCGGCAGCAGTAAGGCGATCGCGGTAGTAACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAAc < 2:601864/138‑1 (MQ=255) tCGGCCAGATCGGCAGCAGTAAGGCGATCGCGGTAGTAACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAAc > 1:601864/1‑138 (MQ=255) ccAGATCGGCAGCAGTAAGGCGATCGCGGTAGTAACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAgg < 1:817157/140‑1 (MQ=255) agTAAGGCGATCGCGGTAGTAACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgccgc < 2:1479/140‑1 (MQ=255) gTAAGGCGATCGCGGTAGTAACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgccgcc > 2:550871/1‑140 (MQ=255) aGGCGATCGCGGTAGTAACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgccgccgcc > 1:1072051/1‑140 (MQ=255) aTCGCGGTAGTAACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCG‑‑‑TTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCa < 1:188831/140‑1 (MQ=255) aCCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCa < 2:393264/124‑1 (MQ=255) aCCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCa < 2:240373/124‑1 (MQ=255) aCCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCa > 1:240373/1‑124 (MQ=255) aCCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCa > 1:393264/1‑124 (MQ=255) aCCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATc > 2:968291/1‑140 (MQ=255) aCCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATc > 1:151324/1‑140 (MQ=255) cccAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCa < 1:322506/140‑1 (MQ=255) aGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCG‑‑‑TTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACt > 2:65183/1‑140 (MQ=255) gAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTa < 1:613891/140‑1 (MQ=255) gAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTa > 1:13819/1‑140 (MQ=255) cgcATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGtt < 2:151324/140‑1 (MQ=255) cATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCg > 2:786944/1‑140 (MQ=255) cATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCg > 1:1176267/1‑140 (MQ=255) cATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCg > 1:143196/1‑140 (MQ=255) cGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCG‑‑‑TTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCTAATCGGGTTGt < 1:65183/140‑1 (MQ=255) cGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCTAATCGGGTTGTCa > 2:795873/1‑140 (MQ=255) cGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGATAATCGGGTTGTCa < 1:550871/140‑1 (MQ=255) atcatcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCTAATCGGGTTGTCAGCGGc > 1:1037678/1‑140 (MQ=255) catcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCTAATCGGGTTGTCAGCGGCaa < 2:1176267/140‑1 (MQ=255) aCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCTAATCGGGTTGTCAGCGGCAAGGAg < 1:786944/140‑1 (MQ=255) aCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCTAATCGGGTTGTCAGCGGCAAGGAg < 1:968291/140‑1 (MQ=255) ccgccgGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCTAATCGGGTTGTCAGCGGCAAGGAGt > 2:546990/1‑140 (MQ=255) ccgGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCTAATCGGGTTGTCAGCGGCAAGGAGTTCa > 2:467783/1‑140 (MQ=255) tCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCTAATCGGGTTGTCAGCGGCAAGGAGTTCATTgaga < 2:143196/140‑1 (MQ=255) tCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCTAATCGGGTTGTCAGCGGCAAGGAGTTCATTgaga < 2:13819/140‑1 (MQ=255) tCACCGCCCGGCGTCCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCTAATCGGGTTGTCAGCGGCAAGGAGTTCATTgaga < 2:54403/140‑1 (MQ=255) tCACCGCCCAGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCTAATCGGGTTGTCAGCGGCAAGGAGTTCATTgaga < 2:367120/140‑1 (MQ=255) gttcgatcGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCTAATCGGGTTGTCAGCGGCAAGGAGTTCATTGAGAt < 1:782677/133‑1 (MQ=255) cACCGCCCGGCGTTCTTCTTCTGTCAATCCCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCTAATCGGGTTGTCAGCGGCAAGGAGTTCATTGAGAt < 2:1098889/140‑1 (MQ=255) ggCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCTAATCGGGTTGTCAGCGGCAAGGAGTTCATTGAGATAACCCCAt > 2:783731/1‑140 (MQ=255) cGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCTAATCGGGTTGTCAGCGGCAAGGAGTTCATTGAGATAACCCCATAc > 1:1194310/1‑140 (MQ=255) | GCTTCCCGCCCTTCGCGCAGCAATTGCGGGTCGGCCAGATCGGCAGCAGTAAGGCGATCGCGGTAGTAACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCTAATCGGGTTGTCAGCGGCAAGGAGTTCATTGAGATAACCCCATAC > NC_000913/1826992‑1827269 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |