Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 4,358,727 IS1 (–) +9 bp coding (1297‑1305/1335 nt) cadB ← lysine:cadaverine antiporter

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3583428 =NA (NA)127 (1.390) 66/272 0.1 100% noncoding (1/768 nt) IS1 repeat region
?NC_000913 4358727 = 0 (0.000)coding (1305/1335 nt) cadB lysine:cadaverine antiporter
* ? NC_000913 = 3584195NA (NA)108 (1.180) 62/272 0.2 100% noncoding (768/768 nt) IS1 repeat region
?NC_000913 = 4358735 0 (0.000)coding (1297/1335 nt) cadB lysine:cadaverine antiporter

Only 100 of 239 total aligned reads displayed.

CAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGGCTCTGGCGCTCGTGCATTTTGCGAGCGTAGAACATCAGGATAATCAGGCTGACGATGAAGGTACCTGCCAGCTCGAAGGAGCTTGCGCCCATCAGCGCGATGAAGCAGAACACGCAACCCAGTACAGAGCAGATCAGG  >  NC_000913/4358597‑4358874
                                                                                                                                          |                                                                                                                                           
    gtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCATTGAGTGGctct                                                                                                                                        >  2:1341801‑M2/127‑140 (MQ=255)
     ttGCATTAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGggtaat                                                                                                                                       >  2:1210368‑M2/1‑134 (MQ=255)
         aaTAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGggtaatgact                                                                                                                                   <  2:50112‑M2/140‑11 (MQ=255)
            gccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCATTGAGTGGCTCTGGCGCTCg                                                                                                                                >  1:202564‑M2/119‑140 (MQ=255)
               gTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGggtaatgactccaact                                                                                                                             >  1:732227‑M2/1‑124 (MQ=255)
               gTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGggtaatgactccaact                                                                                                                             <  2:732227‑M2/140‑17 (MQ=255)
                  acgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCATTGAGTGGCTCTGGCGCTCGTGCAtt                                                                                                                          >  2:1424559‑M2/113‑140 (MQ=255)
                      accaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCATTGAGTGGCTCTGGCGCTCGTGCATTTTGc                                                                                                                      <  2:435985‑M2/32‑1 (MQ=255)
                      accaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCATTGAGTGGCTCTGGCGCTCGTGCATTTTGc                                                                                                                      <  1:1424559‑M2/32‑1 (MQ=255)
                         atatCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGggtaatgactccaa                                                                                                                               <  2:643576‑M2/128‑15 (MQ=255)
                         atatCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGggtaatgact                                                                                                                                   >  1:988461‑M2/1‑114 (MQ=255)
                         accccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCATTGAGTGGCTCTGGCGCTCGTGCATTTTGTGAg                                                                                                                   <  2:102253‑M2/35‑1 (MQ=255)
                            tctcCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGggtaatgactccaacttattgatagtgtt                                                                                                                >  2:475969‑M2/1‑111 (MQ=255)
                             cgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCATTGAGTGGCTCTGGCGCTCGTGCATTTTGCGAGCGTa                                                                                                               >  2:23990‑M2/102‑140 (MQ=255)
                              tcCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGggtaatgactccaacttattgatagtgtttt                                                                                                              >  2:363502‑M2/1‑109 (MQ=255)
                              gtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCATTGAGTGGCTCTGGCGCTCGTGCATTTTGCGAGCGTAg                                                                                                              <  2:202564‑M2/40‑1 (MQ=255)
                              gtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCATTGAGTGGCTCTGGCGCTCGTGCATTTTGCGAGCGTAg                                                                                                              >  1:263443‑M2/101‑140 (MQ=255)
                               tcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCATTGAGTGGCTCTGGCGCTCGTGCATTTTGCGAGCGTAGa                                                                                                             >  1:140312‑M2/100‑140 (MQ=255)
                                cAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGggtaatgactccaacttattgatagtgttttat                                                                                                            <  1:1561560‑M2/140‑34 (MQ=255)
                                 aGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGggtaatgactccaacttattgatagtgttttatg                                                                                                           <  2:1387840‑M2/140‑35 (MQ=255)
                                   tagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCATTGAGTGGCTCTGGCGCTCGTGCATTTTGCGAGCGTAGAACa                                                                                                          <  1:1398924‑M2/44‑1 (MQ=255)
                                   tagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCATTGAGTGGCTCTGGCGCTCGTGCATTTTGCGAGCGTAGAACa                                                                                                          >  2:1398924‑M2/96‑139 (MQ=255)
                                   gTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGggtaatgactccaacttattgatagtgttttatgtt                                                                                                         <  1:909529‑M2/140‑37 (MQ=255)
                                     gctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCATTGAGTGGCTCTGGCGCTCGTGCATTTTGc                                                                                                                      <  2:326551‑M2/32‑1 (MQ=255)
                                            aggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCATTGAGTGGCTCTGGCGCTCGTGCATTTTGCGAGCGTAGATCATCAGGATAAt                                                                                                <  2:821875‑M2/54‑1 (MQ=255)
                                            aggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCATTGAGTGGCTCTGGCGCTCGTGCATTTTGCGAGCGTAGAACATCAGGATAAt                                                                                                <  2:188363‑M2/54‑1 (MQ=255)
                                                gggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCATTGAGTGGCTCTGGCGCTCGTGCATTTTGCGAGCGTAGAACATCGGGATAATCAgg                                                                                            <  1:616194‑M2/58‑1 (MQ=255)
                                                gggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCATTGAGTGGCTCTGGCGCTCGTGCATTTTGCGAGCGTAGAACATCAGGATAATCAgg                                                                                            <  2:398468‑M2/58‑1 (MQ=255)
                                                gggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCATTGAGTGGCTCTGGCGCTCGTGCATTTTGCGAGCGTAGAACATCAGGATAATCAgg                                                                                            <  2:772137‑M2/58‑1 (MQ=255)
                                                 tCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccga                                                                                           >  2:909529‑M2/1‑90 (MQ=255)
                                                   acagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCATTGAGTGGCTCTGGCGCTCGTGCATTTTGCGAGCGTAGAACATCAGGATAATCAGGCTg                                                                                         >  1:1479755‑M2/80‑140 (MQ=255)
                                                      gctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCATTGAGTGGCTCTGGCGCTCGTGCATTTTGCGAGCGTAGAACATCAGGATAATCAGGCTGACg                                                                                      >  1:1344400‑M2/77‑140 (MQ=255)
                                                        tgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCATTGAGTGGCTCTGGCGCTCGTGCATTTTGCGAGCGTAGAACATCAGGATAATCAGGCTGACGAt                                                                                    >  2:1107620‑M2/75‑140 (MQ=255)
                                                         caTGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttg                                                                                   >  2:534030‑M2/1‑82 (MQ=255)
                                                          atagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCATTGAGTGGCTCTGGCGCTCGTGCATTTTGCGAGCGTAGAACATCAGGATAATCAGGCTGACGATGa                                                                                  <  1:373796‑M2/68‑1 (MQ=255)
                                                          atagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCATTGAGTGGCTCTGGCGCTCGTGCATTTTGCGAGCGTAGAACATCAGGATAATCAGGCTGACGATGa                                                                                  <  1:23990‑M2/68‑1 (MQ=255)
                                                            gggATAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccga                                                                                           >  2:798522‑M2/1‑79 (MQ=255)
                                                            gggACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGggtaatgacttcaacttattgatagtgttttatgttcagataatgcccgatgactttgtca                                                                                <  1:1147729‑M2/140‑62 (MQ=255)
                                                            gggACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtca                                                                                <  2:585903‑M2/140‑62 (MQ=255)
                                                            gggACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtca                                                                                <  2:356149‑M2/140‑62 (MQ=255)
                                                            gggACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtca                                                                                <  1:1462961‑M2/140‑62 (MQ=255)
                                                            gggACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtca                                                                                <  2:112158‑M2/140‑62 (MQ=255)
                                                            gggACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtca                                                                                <  2:1510300‑M2/140‑62 (MQ=255)
                                                            gggACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtca                                                                                <  1:876672‑M2/140‑62 (MQ=255)
                                                            agaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCATTGAGTGGCTCTGGCGCTCGTGCATTTTGCGAGCGTAGAACATCAGGATAATCAGGCTGACGATGAAg                                                                                >  1:682671‑M2/71‑140 (MQ=255)
                                                               aacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCATTGAGTGGCTCTGGCGCTCGTGCATTTTGCGAGCGTAGAACATCAGGATAATCAgg                                                                                            >  2:1333467‑M2/68‑125 (MQ=255)
                                                               aacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCATTGAGTGGCTCTGGCGCTCGTGCATTTTGCGAGCGTAGAACATCAGGATAATCAgg                                                                                            <  1:1333467‑M2/58‑1 (MQ=255)
                                                                      gAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatg                                                                              >  2:612263‑M2/1‑69 (MQ=255)
                                                                        cactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCATTGAGTGGCTCTGGCGCTCGTGCATTTTGCGAGCGTAGAACATCAGGATAATCAGGCTGACGATGAAGGTACCTGCCAGc                                                                    <  2:483667‑M2/82‑1 (MQ=255)
                                                                        cactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCATTGAGTGGCTCTGGCGCTCGTGCATTTTGCGAGCGTAGAACATCAGGATAATCAGGCTGACGATGAAGGTACCTGCCAGc                                                                    <  2:1368265‑M2/82‑1 (MQ=255)
                                                                        aaGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccacc                                                                    <  1:88859‑M2/140‑74 (MQ=255)
                                                                        aaGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccacc                                                                    <  1:312496‑M2/140‑74 (MQ=255)
                                                                         aggaggAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGggtaatgactccaacttattgatagtgttttatgtcagataatgcccgatgactttgtcatgcagctccaccga                                                                   <  1:61982‑M2/140‑75 (MQ=255)
                                                                         actggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCATTGAGTGGCTCTGGCGCTCGTGCATTTTGCGAGCGTAGAACATCAGGATAATCAGGCTGACGATGAAGGTACCTGCCAGCt                                                                   >  2:602955‑M2/58‑140 (MQ=255)
                                                                                 ccTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctcca                                                                      <  1:70827‑M2/129‑72 (MQ=255)
                                                                                 acctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCATTGAGTGGCTCTGGCGCTCGTGCATTTTGCGAGCGTAGAACATCAGGATAATCAGGCTGACGATGAAGGTACCTGCCAGCTCGAAGGAg                                                           >  1:480120‑M2/50‑140 (MQ=255)
                                                                                  cctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCATTGAGTGGCTCTGGCGCTCGTGCATTTTGCGAGCGTAGAACATCAGGATAATCAGGCTGACGATGAAGGTACCTGCCAGCTCGAAGGAGc                                                          >  1:419646‑M2/49‑140 (MQ=255)
                                                                                  cctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCATTGAGTGGCTCTGGCGCTCGTGCATTTTGCGAGCGTAGAACATCAGGATAATCAGGCTGACGATGAAGGTACCTGCCAGCTCGAAGGAGc                                                          <  2:682671‑M2/92‑1 (MQ=255)
                                                                                   ctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCATTGAGTGGCTCTGGCGCTCGTGCATTTTGCGAGCGTAGAACATCAGGATAATCAGGCTGACGATGAAGGTACCTGCCAGCTCGAAGGAGCt                                                         >  1:1033715‑M2/48‑140 (MQ=255)
                                                                                              ttttAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgact                                              <  1:1299706‑M2/140‑96 (MQ=255)
                                                                                                 taattaatGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttcc                                           <  2:82455‑M2/140‑99 (MQ=255)
                                                                                                   attaatGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagcagctccaccgattttgagaacgacagcgacttc                                         >  2:290768‑M2/1‑40 (MQ=255)
                                                                                                        taaatcagtaagttggcagcatcaccCATTGAGTGGCTCTGGCGCTCGTGCATTTTGCGAGCGTAGAACATCAGGATAATCAGGCTGACGATGAAGGTACCTGCCAGCTCGAAGGAGCTTGCGCCCATCAGCGCGATGaa                                    >  2:992157‑M2/27‑140 (MQ=255)
                                                                                                           atcagtaagttggcagcatcaccCATTGAGTGGCTCTGGCGCTCGTGCATTTTGCGAGCGTAGAACATCAGGATAATCAGGCTGACGATGAAGGTACCTGCCAGCTCGAAGGAGCTTGCGCCCATCAGCGCGATGAAGCa                                 >  2:257342‑M2/24‑140 (MQ=255)
                                                                                                            cGTTAGACGCGGTGTGGTTATCCATTGAGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgt                                <  1:1031836‑M2/140‑110 (MQ=255)
                                                                                                            cGTTAGACGCGGTGTGGTTATCCATTGAGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgt                                <  1:950112‑M2/140‑110 (MQ=255)
                                                                                                             cagtaagttggcagcatcaccCATTGAGTGGCTCTGGCGCTCGTGCATTTTGCGAGCGTAGAACATCAGGATAATCAGGCTGACGATGAAGGTACCTGCCAGCTCGAAGGAGCTTGCGCCCATCAGCGCGATGAAGCAGa                               <  1:831335‑M2/119‑1 (MQ=255)
                                                                                                                  agttggcagcatcaccCATTGAGTGGCTCTGGCGCTCGTGCATTTTGCGAGCGTAGAACATCAGGATAATCAGGCTGACGATGAAGGTACCTGCCAGCTCGAAGGAGCTTGCGCCCATCAGCGCGATGAAGCAGAACACg                          <  2:1317271‑M2/124‑1 (MQ=255)
                                                                                                                  agttggcagcatcaccCATTGAGTGGCTCTGGCGCTCGTGCATTTTGCGAGCGTAGAACATCAGGATAATCAGGCTGACGATGAAGGTACCTGCCAGCTCGAAGGAGCTTGCGCCCATCAGCGCGATGAAGCAGAACACg                          <  2:881731‑M2/124‑1 (MQ=255)
                                                                                                                  agttggcagcatcaccCATTGAGTGGCTCTGGCGCTCGTGCATTTTGCGAGCGTAGAACATCAGGATAATCAGGCTGACGATGAAGGTACCTGCCAGCTCGAAGGAGCTTGCGCCCATCAGCGCGATGAAGCAGAACACg                          <  1:575997‑M2/124‑1 (MQ=255)
                                                                                                                  agttggcagcatcaccCATTGAGTGGCTCTGGCGCTCGTGCATTTTGCGAGCGTAGAACATCAGGATAATCAGGCTGACGATGAAGGTACCTGCCAGCTCGAAGGAGCTTGCGCCCATCAGCGCGATGAAGCAGAACACg                          <  1:638334‑M2/124‑1 (MQ=255)
                                                                                                                  agttggcagcatcaccCATTGAGTGGCTCTGGCGCTCGTGCATTTTGCGAGCGTAGAACATCAGGATAATCAGGCTGACGATGAAGGTACCTGCCAGCTCGAAGGAGCTTGCGCCCATCAGCGCGATGAAGCAGAACACg                          <  2:972790‑M2/124‑1 (MQ=255)
                                                                                                                    ttggcagcatcaccCATTGAGTGGCTCTGGCGCTCGTGCATTTTGCGAGCGTAGAACATCAGGATAATCAGGCTGACGATGAAGGTACCTGCCAGCTCGAAGGAGCTTGCGCCCATCAGCGCGATGAAGCAGAACACg                          <  2:277778‑M2/124‑1 (MQ=255)
                                                                                                                    ttggcagcatcaccCATTGAGTGGCTCTGGCGCTCGTGCATTTTGCGAGCGTAGAACATCAGGATAATCAGGCTGACGATGAAGGTACCTGCCAGCTCGAAGGAGCTTGCGCCCATCAGCGCGATGAAGCAGAACACg                          >  1:277778‑M2/15‑138 (MQ=255)
                                                                                                                    gcgGTGTGGTTATCCATTGAGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtg                        >  1:512735‑M2/1‑23 (MQ=255)
                                                                                                                    gcgGTGTGGTTATCCATTGAGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtg                        >  1:356149‑M2/1‑23 (MQ=255)
                                                                                                                      ggTGTGGTTATCCATTGAGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgct                      <  2:956150‑M2/140‑120 (MQ=255)
                                                                                                                       gcagcatcaccCATTGAGTGGCTCTGGCGCTCGTGCATTTTGCGAGCGTAGAACATCAGGATAATCAGGCTGACGATGAAGGTACCTGCCAGCTCGAAGGAGCTTGCGTCCATCAGCGCGATGAAGCAGAACACGCAAcc                     <  1:602955‑M2/129‑1 (MQ=255)
                                                                                                                       gcagcatcaccCATTGAGTGGCTCTGGCGCTCGTGCATTTTGCGAGCGTAGAACATCAGGATAATCAGGCTGACGATGAAGGTACCTGCCAGCTCGAAGGAGCTTGCGCCCATCAGCGCGATGAAGCAGAACACGCAAcc                     <  1:121405‑M2/129‑1 (MQ=255)
                                                                                                                       gcagcatcaccCATTGAGTGGCTCTGGCGCTCGTGCATTTTGCGAGCGTAGAACATCAGGATAATCAGGCTGACGATGAAGGTACCTGCCAGCTCGAAGGAGCTTGCGCCCATCAGCGCGATGAAGCAGAACACGCAAcc                     <  1:398272‑M2/129‑1 (MQ=255)
                                                                                                                          tgGTTATCCATTGAGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcct                  >  1:799873‑M2/1‑17 (MQ=255)
                                                                                                                          tgGTTATCCATTGAGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcct                  >  2:423227‑M2/1‑17 (MQ=255)
                                                                                                                           ggTTATCCATTGAGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctc                 >  1:1094953‑M2/1‑16 (MQ=255)
                                                                                                                             tcaccCATTGAGTGGCTCTGGCGCTCGTGCATTTTGCGAGCGTAGAACATCAGGATAATCAGGCTGACGATGAAGGTACCTGCCAGCTCGAAGGAGCTTGCGCCCATCAGCGCGATGAAGCAGAACACGCAAcc                     <  1:804858‑M2/129‑1 (MQ=255)
                                                                                                                                ccCATTGAGTGGCTCTGGCGCTCGTGCATTTTGCGAGCGTAGAACATCAGGATAATCAGGCTGACGATGAAGGTACCTGCCAGCTCGAAGGAGCTTGCGCCCATCAGCGCGATGAAGCAGAACACGCAACCCAGTACaga            <  1:257342‑M2/138‑1 (MQ=255)
                                                                                                                                 cCATTGAGTGGCTCTGGCGCTCGTGCATTTTGCGAGCGTAGAACATCAGGATAATCAGGCTGACGATGAAGGTACCTGCCAGCTCGAAGGAGCTTGCGCCCATCAGCGCGATGAAGCAGAACACg                          >  2:1453886‑M2/2‑125 (MQ=255)
                                                                                                                                 cCATTGAGTGGCTCTGGCGCTCGTGCATTTTGCGAGCGTAGAACATCAGGATAATCAGGCTGACGATGAAGGTACCTGCCAGCTCGAAGGAGCTTGCGCCCATCAGCGCGATGAAGCAGAACACg                          <  1:1453886‑M2/124‑1 (MQ=255)
                                                                                                                                    ttGAGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcagg        >  2:1222508‑M2/1‑7 (MQ=255)
                                                                                                                                    ttGAGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcagg        <  1:21875‑M2/140‑134 (MQ=255)
                                                                                                                                      gAGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggtt      <  2:1133164‑M2/140‑136 (MQ=255)
                                                                                                                                      gAGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagat             <  1:433769‑M2/133‑129 (MQ=255)
                                                                                                                                      gAGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcaga              >  1:138078‑M2/1‑5 (MQ=255)
                                                                                                                                      gAGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccagatgctgcctcagattcaggtt      <  1:1502193‑M2/140‑136 (MQ=255)
                                                                                                                                       aGTGGCTCTGGCGCTCGTGCATTTTGCGAGCGTAGAACATCAGGATAATCAGGCTGACGATGAAGGTACCTGCCAGCTCGAAGGAGCTTGCGCCCATCAGCGCGATGAAGCAGAACACGCAACCCAGTACAGAGCAGATc     >  2:1032907/1‑140 (MQ=255)
                                                                                                                                         tGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatg   <  2:1040790‑M2/140‑139 (MQ=255)
                                                                                                                                         tGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagat             <  1:1055706‑M2/130‑129 (MQ=255)
                                                                                                                                         tGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagat             >  2:1055706‑M2/1‑2 (MQ=255)
                                                                                                                                         tGggtaatgactccaacttattgatagtgttttatgatcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatg   <  1:1248024‑M2/140‑139 (MQ=255)
                                                                                                                                         tGGCTCTGGCGCTCGTGCATTTTGCGAGCGTAGAACATCAGGATAATCAGGCTGACGATGAAGGTACCTGCCAGCTCGAAGGAGCTTGCGCCCATCAGCGCGATGAAGCAGAACACGCAACCCAGTa                <  2:489077/127‑1 (MQ=255)
                                                                                                                                         tGGCTCTGGCGCTCGTGCATTTTGCGAGCGTAGAACATCAGGATAATCAGGCTGACGATGAAGGTACCTGCCAGCTCGAAGGAGCTTGCGCCCATCAGCGCGATGAAGCAGAACACGCAACCCAGTACAGAGCAGATCAg   <  1:496567/140‑1 (MQ=255)
                                                                                                                                          |                                                                                                                                           
CAATATTGCAATAACGTTCATAGTCATATCTCCAGGTAAAAAAGGCCCCTCCCAACACATGGGACAAAATGAAAGGAGGAGCCTCGGAAAATACTTTTAATTAATGTGCGTTAGACGCGGTGTGGTTATCCATTGAGTGGCTCTGGCGCTCGTGCATTTTGCGAGCGTAGAACATCAGGATAATCAGGCTGACGATGAAGGTACCTGCCAGCTCGAAGGAGCTTGCGCCCATCAGCGCGATGAAGCAGAACACGCAACCCAGTACAGAGCAGATCAGG  >  NC_000913/4358597‑4358874

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.