Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	2,320,490	(CAGG)3→2	coding (448‑451/1827 nt)	atoS →	sensory histidine kinase AtoS

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	2320482	2320485	4	89 [0]	[0] 87	atoS	sensory histidine kinase AtoS

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2320486 =	0 (0.000)	87 (1.040)	53/258	0.3	100%	coding (444/1827 nt)	atoS	sensory histidine kinase AtoS
	?	NC_000913	= 2320481	0 (0.000)					coding (439/1827 nt)	atoS	sensory histidine kinase AtoS

TGCTGGTTATTACAACAAAATGCTGGATGCGATAATCACCTACGCGCCTTCAGCGCTATATCAGAATAATGTCGGCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTCAGGCAGGCAGGTGCGCGGCGATATTTTGAATTCAATGCTCCCCATTGAGCGTAATGGTGAAATCCTCGGCTATATCTGGGCCAATGAATTAACCGAAGATATTCGCCGCCAGGCCTGGAAAATGGATGTGAGGAT  >  NC_000913/2320342‑2320617                                                                                                                                            |                                                                                                                                         tGCTGGTTATTACAACAAAATGCTGGATGCGATAATCACCTACGCGCCTTCAGCGCTATATCAGAATAATGTCGGCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTAtt                                                                                                                                          <  1:1154117/140‑1 (MQ=255) tGCTGGTTATTACAACAAAATGCTGGATGCGATAATCACCTACGCGCCTTCAGCGCTATATCAGAATAATGTCGGCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTAtt                                                                                                                                          >  2:880267/1‑140 (MQ=255)           taCAACAAAATGCTGGATGCGATAATCACCTACGCGCCTTCAGCGCTATATCAGAATAATGTCGGCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtg                                                                                                                                <  2:1135994‑M2/140‑11 (MQ=255)                caaAATGCTGGATGCGATAATCACCTACGCGCCTTCAGCGCTATATCAGAATAATGTCGGCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcgg                                                                                                                           <  2:815695‑M2/140‑16 (MQ=255)                caaAATGCTGGATGCGATAATCACCTACGCGCCTTCAGCGCTATATCAGAATAATGTCGGCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcgg                                                                                                                           <  2:756550‑M2/140‑16 (MQ=255)                   aaTGCTGGATGCGATAATCACCTACGCGCCTTCAGCGCTATATCAGAATAATGTCGGCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcga                                                                                                                        <  1:988239‑M2/140‑19 (MQ=255)                   aaTGCTGGATGCGATAATCACCTACGCGCCTTCAGCGCTATATCAGAATAATGTCGGCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcga                                                                                                                        <  1:499278‑M2/140‑19 (MQ=255)                           aTGCGATAATCACCTACGCGCCTTCAGCGCTATATCAGAATAATGTCGGCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttga                                                                                                                <  1:704352‑M2/140‑27 (MQ=255)                              cGATAATCACCTACGCGCCTTCAGCGCTATATCAGAATAATGTCGGCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaatt                                                                                                             >  2:704352‑M2/1‑111 (MQ=255)                                  aaTCACCTACGCGCCTTCAGCGCTATATCAGAATAATGTCGGCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaat                                                                                                         >  1:733219‑M2/1‑107 (MQ=255)                                    tCACCTACGCGCCTTCAGCGCTATATCAGAATAATGTCGGCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgc                                                                                                       <  2:327248‑M2/140‑36 (MQ=255)                                     cACCTACGCGCCTTCAGCGCTATATCAGAATAATGTCGGCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgct                                                                                                      >  2:499278‑M2/1‑104 (MQ=255)                                          aCGCGCCTTCAGCGCTATATCAGAATAATGTCGGCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctcccca                                                                                                 >  1:756550‑M2/1‑99 (MQ=255)                                           cgcgCCTTCAGCGCTATATCAGAATAATGTCGGCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccat                                                                                                <  1:668601‑M2/140‑43 (MQ=255)                                           cgcgCCTTCAGCGCTATATCAGAATAATGTCGGCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccat                                                                                                <  1:739642‑M2/140‑43 (MQ=255)                                             cgcCTTCAGCGCTATATCAGAATAATGTCGGCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaat                                                                                                         >  2:1195715‑M2/1‑96 (MQ=255)                                             cgcCTTCAGCGCTATATCAGAATAATGTCGGCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaat                                                                                                         <  1:1195715‑M2/129‑34 (MQ=255)                                             cgcCTTCAGCGCTATATCAGAATAATGTCGGCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattca                                                                                                           <  1:1227921‑M2/127‑32 (MQ=255)                                             cgcCTTCAGCGCTATATCAGAATAATGTCGGCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattca                                                                                                           >  2:1227921‑M2/1‑96 (MQ=255)                                                 ttCAGCGCTATATCAGAATAATGTCGGCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattga                                                                                             >  2:957354‑M2/1‑92 (MQ=255)                                                 ttCAGCGCTATATCAGAATAATGTCGGCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattga                                                                                             <  1:957354‑M2/137‑46 (MQ=255)                                                  tCAGCGCTATATCAGAATAATGTCGGCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgt                                                                                         <  1:1314085‑M2/140‑50 (MQ=255)                                                  tCAGCGCTATATCAGAATAATGTCGGCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgt                                                                                         <  1:922521‑M2/140‑50 (MQ=255)                                                  tCAGCGCTATATCAGAATAATGTCGGCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggggcgcggcgatattttgaattcaatgctccccattgagcgt                                                                                         <  1:289220‑M2/140‑50 (MQ=255)                                                          atatCAGAATAATGTCGGCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtga                                                                                 <  1:452393‑M2/140‑58 (MQ=255)                                                          atatCAGAATAATGTCGGCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtga                                                                                 <  1:644039‑M2/140‑58 (MQ=255)                                                          atatCAGAATAATGTCGGCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtga                                                                                 <  1:236378‑M2/140‑58 (MQ=255)                                                          atatCAGAATAATGTCGGCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtga                                                                                 <  1:1091777‑M2/140‑58 (MQ=255)                                                          atatCAGAATAATGTCGGCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCATTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtga                                                                                 <  1:973112‑M2/140‑58 (MQ=255)                                                              cAGAATAATGTCGGCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtgaaatc                                                                             >  1:1426282‑M2/1‑79 (MQ=255)                                                               aGAATAATGTCGGCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtgaaatcc                                                                            >  1:880267‑M2/1‑78 (MQ=255)                                                               aGAATAATGTCGGCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtgaaatcc                                                                            >  2:794029‑M2/1‑78 (MQ=255)                                                               aGAATAATGTCGGCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtgaaatcc                                                                            >  2:988239‑M2/1‑78 (MQ=255)                                                               aGAATAATGTCGGCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtgaaatcc                                                                            >  1:1135994‑M2/1‑78 (MQ=255)                                                               aGAATAATGTCGGCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtgaaatcc                                                                            >  1:327248‑M2/1‑78 (MQ=255)                                                                   taatGTCGGCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTGTTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtgaaatcctcgg                                                                        <  1:1508650‑M2/140‑67 (MQ=255)                                                                   taatGTCGGCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtgaaatcctcgg                                                                        <  1:1124772‑M2/140‑67 (MQ=255)                                                                   taatGTCGGCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtgaaatcctcgg                                                                        <  1:311626‑M2/140‑67 (MQ=255)                                                                    aatGTCGGCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtgaaatcctcggc                                                                       >  2:644039‑M2/1‑73 (MQ=255)                                                                     atGTCGGCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtgaaatcctcggct                                                                      >  2:1403971‑M2/1‑72 (MQ=255)                                                                     atGTCGGCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtgaaatcctcggct                                                                      <  1:1403971‑M2/140‑69 (MQ=255)                                                                     atGTCGGCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtgaaatcctcggc                                                                       >  2:1160094‑M2/1‑72 (MQ=255)                                                                     atGTCGGCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtgaaatcctcggc                                                                       <  1:1160094‑M2/139‑68 (MQ=255)                                                                     atGTCGGCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtgaaatcctcgg                                                                        <  2:495966‑M2/138‑67 (MQ=255)                                                                     atGTCGGCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtgaaatcctcgg                                                                        >  1:495966‑M2/1‑72 (MQ=255)                                                                     atGTCGGCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtgaaatcc                                                                            >  2:591655‑M2/1‑72 (MQ=255)                                                                     atGTCGGCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtgaaatcc                                                                            <  1:591655‑M2/134‑63 (MQ=255)                                                                     atGTCGGCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtgaaatc                                                                             >  2:752563‑M2/1‑72 (MQ=255)                                                                     atGTCGGCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtgaaatc                                                                             <  1:752563‑M2/133‑62 (MQ=255)                                                                      tGTCGGCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtgaaatcctcggcta                                                                     <  1:465814‑M2/140‑70 (MQ=255)                                                                      tGTCGGCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtgaaatcc                                                                            <  2:147613‑M2/133‑63 (MQ=255)                                                                      tGTCGGCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtgaaatcc                                                                            >  1:147613‑M2/1‑71 (MQ=255)                                                                           gCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtgaaatcctcggctatatct                                                                >  2:311626‑M2/1‑66 (MQ=255)                                                                           gCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtgaaatcctcggctatatct                                                                >  2:1124772‑M2/1‑66 (MQ=255)                                                                           gCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtgaaatcctcggctatatct                                                                <  2:987780‑M2/140‑75 (MQ=255)                                                                           gCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtgaaatcctcggct                                                                      <  2:166415‑M2/134‑69 (MQ=255)                                                                           gCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtgaaatcctcggct                                                                      >  1:166415‑M2/1‑66 (MQ=255)                                                                            cGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATGCCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccagtgagcgtaatggtgaaagcctcggctatatctg                                                               >  2:289220‑M2/1‑65 (MQ=255)                                                                                 ccATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtgaaatcctcggctatatctgggcca                                                          >  1:815695‑M2/1‑60 (MQ=255)                                                                                  cATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtgaaatcctcggctatatctgggccaa                                                         >  2:922521‑M2/1‑59 (MQ=255)                                                                                     tGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtgaaatcctcggctatatctgggccaatga                                                      <  1:1332843‑M2/140‑85 (MQ=255)                                                                                      gCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtgaaatcctcggctatatctgggccaatgaa                                                     >  2:452393‑M2/1‑55 (MQ=255)                                                                                        cGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtgaaatcctcggctatatctgggccaatgaatt                                                   <  1:134279‑M2/140‑88 (MQ=255)                                                                                         gCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtgaaatcctcggctatatctgggccaatgaatta                                                  <  2:295810‑M2/140‑89 (MQ=255)                                                                                                     ggTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtgaaatcctcggctatatctgggccaatgaattaaccgaagatatt                                      >  2:668601‑M2/1‑40 (MQ=255)                                                                                                      gTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtgaaatcctcggctatatctgggccaatgaat                                                    >  1:4347‑M2/1‑39 (MQ=255)                                                                                                      gTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtgaaatcctcggctatatctgggccaatgaat                                                    <  2:4347‑M2/125‑87 (MQ=255)                                                                                                       tCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtgaaatcctcggctatatctgggccaatgaattaaccgaagatattcg                                    <  1:13928‑M2/140‑103 (MQ=255)                                                                                                       tCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtgaaatcctcggctatatctgggccaatgaattaaccgaagatattcg                                    <  2:570255‑M2/140‑103 (MQ=255)                                                                                                       tCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtgaaatcctcggctatatctgggccaatgaattaaccgaagatattcg                                    <  2:1433095‑M2/140‑103 (MQ=255)                                                                                                       tCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatatttgaattcaatgctccccattgagcgtaatggtgaaatcctcggctatatctgggccaatgaattaaccgaagatattcgc                                    <  1:286546‑M2/140‑103 (MQ=255)                                                                                                         gcgAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtgaaatcctcggctatatctgggccaatgaattaaccgaagatattcgcc                                  <  2:1521518‑M2/140‑105 (MQ=255)                                                                                                           gAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtgaaatcctcggctatatctgggccaatgaattaaccgaagatattcgccgc                                >  2:13928‑M2/1‑34 (MQ=255)                                                                                                           gAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtgaaatcctcggctatatctgggccaatgaattaaccgaagatattcgccgc                                >  1:1521518‑M2/1‑34 (MQ=255)                                                                                                           gAAGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtgaaatcctcggctatatctgggccaatgaattaaccgaagatattcgccgc                                >  1:570255‑M2/1‑34 (MQ=255)                                                                                                            aaGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtgaaatcctcggctatatctgggccaatgaattaaccgaagatattcgccgcc                               >  2:465814‑M2/1‑33 (MQ=255)                                                                                                             aGTGATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtgaaatcctcggctatatctgggccaatgaattaaccgaagatattcgccgcca                              >  1:987780‑M2/1‑32 (MQ=255)                                                                                                                gATGCGTACAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatatttgaattcaatgctccccattgagcgtaatggtgaaatcctcggctatatctgggccaatgaattaaccgaagatattcgccgccaggcc                           >  2:286546‑M2/1‑29 (MQ=255)                                                                                                                        cAAATACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtgaaatcctcggctatatctgggccaatgaattaaccgaagatattcgccgccaggcctggaaaa                   >  1:1433095‑M2/1‑21 (MQ=255)                                                                                                                         aaaTACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtgaaatcctcggctatatctgggccaatgaattaaccgaagatattcgccgccaggcctggaaaat                  >  2:134279‑M2/1‑20 (MQ=255)                                                                                                                           aTACCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtgaaatcctcggctatatctgggccaatgaattaaccgaagatattcgccgccaggcctggaaaatgg                <  1:572272‑M2/140‑123 (MQ=255)                                                                                                                             aCCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtgaaatcctcggctatatctgggccaatgaattaaccgaagatattcgccgccaggcctggaaaatggat              >  2:572272‑M2/1‑16 (MQ=255)                                                                                                                             aCCCCTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtgaaatcctcggctatatctgggccaatgaattaaccgaagatattcgccgccaggcctggaaaatggat              <  2:247952‑M2/140‑125 (MQ=255)                                                                                                                                ccTTTAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtgaaatcctcggctatatctgggccaatgaattaaccgaagatattcgccgccaggcctggaaaatggatgtg           >  1:295810‑M2/1‑13 (MQ=255)                                                                                                                                  tttAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtgaaatcctcggctatatctgggccaatgaattaaccgaagatattcgccgccaggcctggaaaatggatgtgag         >  1:247952‑M2/1‑11 (MQ=255)                                                                                                                                   ttAGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtgaaatcctcggctatatctgggccaatgaattaaccgaagatattcgccgccaggcctggaaaatggatgtgagg        <  2:1199241‑M2/140‑131 (MQ=255)                                                                                                                                     aGTTTATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtgaaatcctcggctatatctgggccaatgaattaaccgaagatattcgccgccaggcctggaaaatggatgtgaggat      <  1:1210729‑M2/140‑133 (MQ=255)                                                                                                                                       tttATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtgaaatcctcggctatatctgggccaatgaattaaccgaagatattcgccgccaggcctggaaaatggatgtgaggatta    <  2:208520‑M2/140‑135 (MQ=255)                                                                                                                                         tATTcaggcaggtgcgcggcgatattttgaattcaatgctccccattgagcgtaatggtgaaatcctcggctatatctgggccaatgaattaaccgaagatattcgccgccaggcctggaaaatggatgtgaggattatc  <  1:710435‑M2/140‑137 (MQ=255)                                                                                                                                            |                                                                                                                                         TGCTGGTTATTACAACAAAATGCTGGATGCGATAATCACCTACGCGCCTTCAGCGCTATATCAGAATAATGTCGGCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTCAGGCAGGCAGGTGCGCGGCGATATTTTGAATTCAATGCTCCCCATTGAGCGTAATGGTGAAATCCTCGGCTATATCTGGGCCAATGAATTAACCGAAGATATTCGCCGCCAGGCCTGGAAAATGGATGTGAGGAT  >  NC_000913/2320342‑2320617

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑