Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	888,014	0	T	G	25.0%	115.7 / 23.3	64	noncoding (44/81 nt)	rybB	small regulatory RNA RybB
Reads supporting (aligned to +/- strand):  ref base T (15/33);  new base G (16/0);  total (31/33)
Fisher's exact test for biased strand distribution p-value = 6.15e-07
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.11e-01
Rejected as consensus: Frequency below/above cutoff threshold.

GGGATGACGCTGCATTTTGTCACCGACCGTAAGCCGCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAA‑TGGGGACATCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGTTGTGCAAAAAAATTTCATTTTCAGGGCAACTTCAGTTTTATCCTAATCCTGGCCATA  >  NC_000913/887876‑888153                                                                                                                                           |                                                                                                                                             gggATGACGCTGCATTTTGTCACCGACCGTAAGCCGCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGtt                                                                                                                                             >  1:834164/1‑140 (MQ=255) gggATGACGCTGCATTTTGTCACCGACCGTAAGCCGCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGtt                                                                                                                                             >  2:1455946/1‑140 (MQ=255)     tGACGCTGCATTTTGTCACCGACCGTAAGCCGCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTTATg                                                                                                                                         <  1:226258/140‑1 (MQ=255)      gACGCTGCATTTTGTCACCGACCGTAAGCCGCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATgg                                                                                                                                        >  1:454289/1‑140 (MQ=255)       aCGCTGCATTTTGTCACCGACCGTAAGCCGCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATggg                                                                                                                                       <  1:410940/140‑1 (MQ=255)               ttttGTCACCGACCGTAAGCCGCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACaa                                                                                                                               <  2:834164/140‑1 (MQ=255)                  tGTCACCGACCGTAAGCCGCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAA‑t                                                                                                                           >  1:1112704/1‑140 (MQ=255)                   gTCACCGACCGTAAGCCGCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAA‑Tg                                                                                                                          >  2:511915/1‑140 (MQ=255)                     cACCGACCGTAAGCCGCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAA‑Tggg                                                                                                                        <  1:1455946/140‑1 (MQ=255)                     cACCGACCGTAAGCCGCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAA‑Tggg                                                                                                                        <  2:1112704/140‑1 (MQ=255)                     cACCGACCGTAAGCCGCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAA‑Tggg                                                                                                                        <  1:351800/140‑1 (MQ=255)                     cACCGACCGTAAGCCGCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAA‑Tggg                                                                                                                        <  2:454289/140‑1 (MQ=255)                          accgTAAGCCGCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAA‑TGGGGACAt                                                                                                                   <  2:707951/140‑1 (MQ=255)                          accgTAAGCCGCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAA‑TGGGGACAt                                                                                                                   <  1:511915/140‑1 (MQ=255)                                     cTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAA‑TGGGGACAt                                                                                                                   <  2:563362/129‑1 (MQ=255)                                     cTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAA‑TGGGGACAt                                                                                                                   >  1:563362/1‑129 (MQ=255)                                     cTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAA‑TGGGGACATCAAAGaaa                                                                                                           <  2:84532/137‑1 (MQ=255)                                     cTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAA‑TGGGGACATCAAAGaaa                                                                                                           >  1:84532/1‑137 (MQ=255)                                     cTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGTGATGGGCTCCACAAAA‑TGGGGGCATCAAAGAAAAga                                                                                                        >  2:53883/1‑139 (MQ=255)                                     cTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGTGATGGGCTCCACAAAA‑AGGGGACATCAAAGaaaaaa                                                                                                        >  2:908556/1‑138 (MQ=255)                                     cTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGTGATGGGCCCCACAAAA‑TGGGGGCATCCAAAAAAAga                                                                                                        >  2:1086331/1‑139 (MQ=255)                                      tATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGTGATGGGCTCCACAAAA‑TGGGGACATCAAAGAAAAGCa                                                                                                       >  1:8751/1‑140 (MQ=255)                                            gcgAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAA‑TGGGGACATCAAAGAAAAGCAGTGGCa                                                                                                 <  1:53883/140‑1 (MQ=255)                                            gagacaggaTTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAA‑TGGGGACATCAAAGAAAAGCAGTGGCa                                                                                                 <  1:557418/133‑1 (MQ=255)                                                    aTTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAA‑TGGGGACATCAAAGAAAAGCAGTGGCACTAATTaa                                                                                         <  1:1086331/140‑1 (MQ=255)                                                    aTTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAA‑TGGGGACATCAAAGAAAAGCAGTGGCACTAATTaa                                                                                         <  1:920318/140‑1 (MQ=255)                                                    aTTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAA‑TGGGGACATCAAAGAAAAGCAGTGGCACTAATTaa                                                                                         <  1:908556/140‑1 (MQ=255)                                                              tGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGTGATGGGCTCCACAAAA‑TGGGGGCATCAAAGAAAAACAGTGGCACTAATTAAGAcctgtctc                                                                               >  2:557418/1‑133 (MQ=255)                                                               ggTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAA‑TGGGGACATCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGccc                                                                              <  1:373227/140‑1 (MQ=255)                                                                        ggTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGTGATGGGCTCCACAAAA‑TGGGGACATCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGaaaa                                                                     >  2:212501/1‑140 (MQ=255)                                                                         gTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAA‑TGGGGACATCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAg                                                                    <  2:8751/140‑1 (MQ=255)                                                                          ttGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAA‑TGGGGACATCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGt                                                                   >  2:346608/1‑140 (MQ=255)                                                                          ttGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGTGATGGGCTCCACAAAA‑TGGGGACATCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGt                                                                   >  2:1363942/1‑140 (MQ=255)                                                                           tGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAA‑TGGGGACATCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTg                                                                            >  1:675197/1‑130 (MQ=255)                                                                           tGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAA‑TGGGGACATCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTg                                                                            <  2:675197/130‑1 (MQ=255)                                                                           tGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGTGATGGGCTCCCCAAAA‑TGGGGACATCAAAAAAAAACAGAGGCCCCAATTAAGACTGATGCCCTGCGGgaaaatc                                                                  >  2:373227/1‑137 (MQ=255)                                                                           tGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAACGGCGGGGTTGATGGGCTCCACAAAA‑TGGGGACATCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTg                                                                            <  2:1291768/130‑1 (MQ=255)                                                                           tGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAACGGCGGGGTTGATGGGCTCCACAAAA‑TGGGGACATCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTg                                                                            >  1:1291768/1‑130 (MQ=255)                                                                                    gtagATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAA‑TGGGGACATCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGaa                                                                       <  2:991761/126‑1 (MQ=255)                                                                                    gtagATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAA‑TGGGGACATCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGaa                                                                       >  1:991761/1‑126 (MQ=255)                                                                                    gtagATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAA‑TGGGGACATCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGTtg                                                         >  1:629307/1‑140 (MQ=255)                                                                                          aaGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGTGATGGGCTCCACAAAATTGGGGACATCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGTTGTGCaa                                                    >  1:592643/1‑140 (MQ=255)                                                                                               ttAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGTGATGGGCTCCACAAAA‑TGGGGACATCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGTTGTGCAAAAAAAt                                              >  2:796185/1‑140 (MQ=255)                                                                                                tAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAA‑TGGGGACATCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGTTGTGCAAAAAAAtt                                             <  1:346608/140‑1 (MQ=255)                                                                                                       cAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAA‑TGGGGACATCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGTTGTGCAAAAAAATTTCAtttt                                      >  1:1156147/1‑140 (MQ=255)                                                                                                           aaaCCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAA‑TGGGGACATCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGTTGTGCAAAAAAATTTCATTTTCAgg                                  <  2:629307/140‑1 (MQ=255)                                                                                                            aaCCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAA‑TGGGGACATCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGTTGTGCAAAAAAATTTCATTTTCAggg                                 <  1:1061775/140‑1 (MQ=255)                                                                                                                 aTCAACCTTGAACCGAAATGGCGGGGGTGATGGGCTCCACAAAA‑TGGGGACATCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGTTGTGCAAAAAAATTTCATTTTCAGGGCAACt                            >  1:628839/1‑140 (MQ=255)                                                                                                                  tCAACCTTGAACCGAAATGGCGGGGGTGATGGGCTCCACAAAA‑TGGGGACATCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGTTGTGCAAAAAAATTTCATTTTCAGGGCAACtt                           >  2:515364/1‑140 (MQ=255)                                                                                                                  tCAACCTTGAACCGAAATGGCGGGGGTGATGGGCTCCACAAAA‑TGGGGACATCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGTTGTGCAAAAAAATTTCATTTTCAGGACAACtt                           >  1:1375790/1‑140 (MQ=255)                                                                                                                        ttGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAA‑TGGGGACATCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGTTGTGCAAAAAAATTTCATTTTCAGGGCAACTTCAGttt                     <  1:620516/140‑1 (MQ=255)                                                                                                                         tGAACCGAAATGGCGGGGGTGATGGGCTCCACAAAA‑TGGGGACATCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGTTGTGCAAAAAAATTTCATTTTCAGGGCAACTTCAGtttt                    >  1:652889/1‑140 (MQ=255)                                                                                                                           aaCCGAAATGGCGGGGTTGATGGGCTCCACAAAA‑TGGGGACATCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGTTGTGCAAAAAAATTTCATTTTCAGGGCAACTTCAGTTTTAt                  >  1:979758/1‑140 (MQ=255)                                                                                                                           aaCCGAAATGGCGGGGGTGATGGGCTCCACAAAA‑TGGGGACATCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGGAAAGTTCTGCGGTTGTGCAAAAAAATTTCATTTTCAGGGCAACTTCAGTTTTAt                  >  2:1233357/1‑140 (MQ=255)                                                                                                                           aaCCGAAATGGCGGGGGTGATGGGCTCCACAAAA‑TGGGGACATCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGTTGTGCAAAAAAATTTCATTTTCAGGGCAACTTCAGTTTTAt                  >  1:744600/1‑140 (MQ=255)                                                                                                                            aCCGAAATGGCGGGGTTGATGGGCTCCACAAAA‑TGGGGACATCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGTTGTGCAAAAAAATTTCATTTTCAGGGCAACTTCAGTTTTATc                 <  2:1156147/140‑1 (MQ=255)                                                                                                                                aaaTGGCGGGGTTGATGGGCTCCCCAAAA‑AGGGGACATCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCCGCGGGAAAATTCTGCGGTTGTGCAAAAAAATTTCATTTTCAGGGCAACTTCAGTTTTATCCTaa             >  2:1173082/1‑140 (MQ=255)                                                                                                                                aaaTGGCGGGGTTGATGGGCTCCACAAAA‑TGGGGACATCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGTTGTGCAAAAAAATTTCATTTTCAGGGCAACTTCAGTTTTAtac                <  1:1325915/137‑3 (MQ=255)                                                                                                                                aaaTGGCGGGGTTGATGGGCTCCACAAAA‑TGGGGACATCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGTTGTGCAAAAAAATTTCATTTTCAGGGCAACTTCAGTTTTAtac                >  2:1325915/1‑135 (MQ=255)                                                                                                                                aaaTGGCGGGGTTGATGGGCTCCACAAAA‑AGGGGACATCAAAGAAAAGCAGGGGCACTAATTAAGACTGATGCCCTGCGGGAAAGTTCTGCGGTTGTGCAAAAAAATTTCATTTTCAGGGCAACTTCAGTTTTATCCTaa             >  2:279022/1‑140 (MQ=255)                                                                                                                                aaaTGGCGGGGGTGATGGGCTCCACAAAA‑TGGGGACATCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGTTGTGGAAAAAAATTTCATTTTCAGGGCAACTTCAGTTTTATCCTaa             >  1:248047/1‑140 (MQ=255)                                                                                                                                  aTGGCGGGGTTGATGGGCTCCACAAAATTGGGGACATCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGTTGTGCAAAAAAATTTCATTTTCAGGGCAACTTCAGTTTTATCCTAAt            <  2:592643/140‑1 (MQ=255)                                                                                                                                  aTGGCGGGGTTGATGGGCTCCACAAAA‑TGGGGACATCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGTTGTGCAAAAAAATTTCATTTTCAGGGCAACTTCAGTTTTATCCTAATc           <  2:799142/140‑1 (MQ=255)                                                                                                                                  aTGGCGGGGTTGATGGGCTCCACAAAA‑TGGGGACATCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGTTGTGCAAAAAAATTTCATTTTCAGGGCAACTTCAGTTTTATCCTAATc           <  2:523030/140‑1 (MQ=255)                                                                                                                                  aTGGCGGGGTTGATGGGCTCCACAAAA‑TGGGGACATCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGTTGTGCAAAAAAATTTCATTTTCAGGGCAACTTCAGTTTTATCCTAATc           <  1:515364/140‑1 (MQ=255)                                                                                                                                      cGGGGTTGATGGGCTCCACAAAA‑TGGGGACATCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGTTGTGCAAAAAAATTTCATTTTCAGGGCAACTTCAGTTTTATCCTAATCCTgg       <  2:744600/140‑1 (MQ=255)                                                                                                                                       ggggTTGATGGGCTCCACAAAA‑TGGGGACATCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGTTGTGCAAAAAAATTTCATTTTCAGGGCAACTTCAGTTTTATCCTAATCCTGGc      <  2:979758/140‑1 (MQ=255)                                                                                                                                           ttGATGGGCTCCACAAAA‑ATGGGGCATCAAAAAAAAGCAGGGGCACTAATTTAGACTGATGCCCCGCGGGAAAGTTCTGCGGGTGTGCAAAAAAAATTCATTTTTAGGGCAACTTCAGTTTTTTCCTAATCCTGGCCCTa  >  2:1357227/1‑140 (MQ=255)                                                                                                                                           |                                                                                                                                             GGGATGACGCTGCATTTTGTCACCGACCGTAAGCCGCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAA‑TGGGGACATCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGTTGTGCAAAAAAATTTCATTTTCAGGGCAACTTCAGTTTTATCCTAATCCTGGCCATA  >  NC_000913/887876‑888153

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑