BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	112	T→C	intergenic (–/‑78)	– / → thrL	–/thr operon leader peptide

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	112	0	T	C	100.0%	955.0 / NA	238	intergenic (–/‑78)	–/thrL	–/thr operon leader peptide
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (123/115); total (123/115)

Only 100 of 238 total aligned reads displayed.

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGCTTTTCATTCTGACTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATTGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGC  >  NC_000913/1‑248

aaaacgccttagtaagtatttttcAGCTTTTCATTCTGACTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACt                                                                                                                                      >  2:244664‑M1/25‑140 (MQ=255)

  aacgccttagtaagtatttttcAGCTTTTCATTCTGACTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTa                                                                                                                                    >  2:2687309‑M1/23‑140 (MQ=255)

  aacgccttagtaagtatttttcAGCTTTTCATTCTGACTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTa                                                                                                                                    >  1:2635761‑M1/23‑140 (MQ=255)

   acgccttagtaagtatttttcAGCTTTTCATTCTGACTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAg                                                                                                                                   <  2:2224016‑M1/119‑1 (MQ=255)

    cgccttagtaagtatttttcAGCTTTTCATTCTGACTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAgg                                                                                                                                  >  2:2862165‑M1/21‑140 (MQ=255)

    cgccttagtaagtatttttcAGCTTTTCATTCTGACTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAgg                                                                                                                                  >  2:1478087‑M1/21‑140 (MQ=255)

    cgccttagtaagtatttttcAGCTTTTCATTCTGACTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAgg                                                                                                                                  >  1:1477143‑M1/21‑140 (MQ=255)

     gccttagtaagtatttttcAGCTTTTCATTCTGACTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGt                                                                                                                                 >  2:1821149‑M1/20‑140 (MQ=255)

      ccttagtaagtatttttcAGCTTTTCATTCTGACTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTtaggac                                                                                                                                <  2:695535‑M1/122‑3 (MQ=255)

      ccttagtaagtatttttcAGCTTTTCATTCTGACTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTc                                                                                                                                >  2:1741122‑M1/19‑140 (MQ=255)

       cttagtaagtatttttcAGCTTTTCATTCTGACTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACt                                                                                                                                      <  2:263517‑M1/116‑1 (MQ=255)

       cttagtaagtatttttcAGCTTTTCATTCTGACTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCa                                                                                                                               <  1:519250‑M1/123‑1 (MQ=255)

          agtaagtatttttcAGCTTTTCATTCTGACTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTa                                                                                                                            <  2:3081836‑M1/126‑1 (MQ=255)

          agtaagtatttttcAGCTTTTCATTCTGACTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTa                                                                                                                            <  1:3268982‑M1/126‑1 (MQ=255)

           gtaagtatttttcAGCTTTTCATTCTGACTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTaa                                                                                                                           >  1:3081836‑M1/14‑140 (MQ=255)

              agtatttttcAGCTTTTCATTCTGACTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATa                                                                                                                        <  2:2946404‑M1/130‑1 (MQ=255)

                tatttttcAGCTTTTCATTCTGACTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACt                                                                                                                      <  2:1992269‑M1/132‑1 (MQ=255)

                tatttttcAGCTTTTCATTCTGACTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACt                                                                                                                      >  2:3268982‑M1/9‑140 (MQ=255)

                tatttttcAGCTTTTCATTCTGACTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACt                                                                                                                      >  2:3134187‑M1/9‑140 (MQ=255)

                tatttttcAGCTTTTCATTCTGACTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACt                                                                                                                      >  1:2215506‑M1/9‑140 (MQ=255)

                   ttttcAGCTTTTCATTCTGACTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTc                                                                                                                                <  2:129723‑M1/122‑1 (MQ=255)

                   ttttcAGCTTTTCATTCTGACTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTa                                                                                                                   >  2:3237384‑M1/6‑140 (MQ=255)

                    tttcAGCTTTTCATTCTGACTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTaa                                                                                                                  >  1:3159205‑M1/5‑140 (MQ=255)

                    tttcAGCTTTTCATTCTGACTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTaa                                                                                                                  >  1:1382160‑M1/5‑140 (MQ=255)

                    tttcAGCTTTTCATTCTGACTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTaa                                                                                                                  >  2:39895‑M1/5‑140 (MQ=255)

                    tttcAGCTTTTCATTCTGACTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTaa                                                                                                                  >  2:1953002‑M1/5‑140 (MQ=255)

                    tttcAGCTTTTCATTCTGACTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTaa                                                                                                                  >  2:2119262‑M1/5‑140 (MQ=255)

                     ttcAGCTTTTCATTCTGACTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTaa                                                                                                                  >  1:2166780‑M1/4‑139 (MQ=255)

                     ttcAGCTTTTCATTCTGACTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAAc                                                                                                                 <  1:205828‑M1/137‑1 (MQ=255)

                     ttcAGCTTTTCATTCTGACTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAAc                                                                                                                 <  2:3107746‑M1/137‑1 (MQ=255)

                     ttcAGCTTTTCATTCTGACTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAAc                                                                                                                 <  1:699300‑M1/137‑1 (MQ=255)

                      tcAGCTTTTCATTCTGACTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAAcc                                                                                                                >  2:3017125‑M1/3‑140 (MQ=255)

                      tcAGCTTTTCATTCTGACTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAAcc                                                                                                                >  1:2711143‑M1/3‑140 (MQ=255)

                      tcAGCTTTTCATTCTGACTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAAcc                                                                                                                >  2:606689‑M1/3‑140 (MQ=255)

                      tcAGCTTTTCATTCTGACTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAAcc                                                                                                                >  1:2432455‑M1/3‑140 (MQ=255)

                        aGCTTTTCATTCTGACTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTaa                                                                                                                           >  1:636019/1‑127 (MQ=255)

                          cTTTTCATTCTGACTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTaa                                                                                                                  >  1:1536089/1‑134 (MQ=255)

                          cTTTTCATTCTGACTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTaa                                                                                                                  <  2:1536089/134‑1 (MQ=255)

                          cTTTTCATTCTGACTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAACCAata                                                                                                            >  2:1549751/1‑140 (MQ=255)

                          cTTTTCATTCTGACTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAACCAata                                                                                                            >  1:1844189/1‑140 (MQ=255)

                                aTTCTGACTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAACCAATATAGGCa                                                                                                      <  2:716303/140‑1 (MQ=255)

                                aTTCTGACTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAACCAATATAGGCa                                                                                                      <  1:1330841/140‑1 (MQ=255)

                                aTTCTGACTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAACCAATATAGGCa                                                                                                      <  2:836201/140‑1 (MQ=255)

                                 ttCTGACTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAACCAATATAGGCAt                                                                                                     <  1:537044/140‑1 (MQ=255)

                                     gACTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAgcg                                                                                                 >  1:3029756/1‑140 (MQ=255)

                                      aCTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAAc                                                                                                                 <  1:2301810/123‑1 (MQ=255)

                                       cTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGca                                                                                               >  2:1230123/1‑140 (MQ=255)

                                              gggCAATATGTCTCTGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCacagacag                                                                                        <  1:1966890/140‑1 (MQ=255)

                                                         ctctGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTAc                                                                             >  1:2386119/1‑140 (MQ=255)

                                                         ctctGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTAc                                                                             >  1:1282530/1‑140 (MQ=255)

                                                          tctGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACa                                                                            >  1:1776764/1‑140 (MQ=255)

                                                          tctGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACa                                                                            <  2:1776764/140‑1 (MQ=255)

                                                          tctGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACa                                                                            <  2:2194944/140‑1 (MQ=255)

                                                          tctGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACa                                                                            <  1:2868277/140‑1 (MQ=255)

                                                          tctGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACa                                                                            >  1:200024/1‑140 (MQ=255)

                                                            tgtgtgGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACaga                                                                          <  1:1893195/140‑1 (MQ=255)

                                                              tgtgGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACagaga                                                                        >  2:2524640/1‑139 (MQ=255)

                                                              tgtgGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACa                                                                            >  1:1671547/1‑136 (MQ=255)

                                                              tgtgGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACa                                                                            <  2:1671547/136‑1 (MQ=255)

                                                              tgtgGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGt                                                                        >  1:1148351/1‑140 (MQ=255)

                                                              tgtgGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGt                                                                        >  1:1939879/1‑140 (MQ=255)

                                                              tgtgGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGt                                                                        >  2:1348463/1‑140 (MQ=255)

                                                              tgtgGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGt                                                                        >  1:722295/1‑140 (MQ=255)

                                                                tgGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACa                                                                            >  1:2798857/1‑134 (MQ=255)

                                                                tgGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACa                                                                            <  2:2798857/134‑1 (MQ=255)

                                                                tgGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTa                                                                       >  1:453646/1‑139 (MQ=255)

                                                                 ggATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTa                                                                              >  1:2741445/1‑131 (MQ=255)

                                                                  gATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTa                                                                              <  2:2998492/130‑1 (MQ=255)

                                                                  gATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTacac                                                                    >  1:1245464/1‑140 (MQ=255)

                                                                   aTTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTAcaca                                                                   <  1:2946404/140‑1 (MQ=255)

                                                                    ttAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACacaa                                                                  <  1:107217/140‑1 (MQ=255)

                                                                        aaaaaGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACa                                                                            <  2:185550/126‑1 (MQ=255)

                                                                             gagTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGa                                                         <  2:1939879/140‑1 (MQ=255)

                                                                               gtgtCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGaaa                                                       <  2:349117/140‑1 (MQ=255)

                                                                                 gtCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACg                                                     >  1:1452917/1‑140 (MQ=255)

                                                                                  tCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTacac                                                                    >  1:262928/1‑124 (MQ=255)

                                                                                         gcagcTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGca                                             <  1:1549751/140‑1 (MQ=255)

                                                                                         gcagcTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGca                                             <  2:2386119/140‑1 (MQ=255)

                                                                                         gcagcTTCTGAACTGGCTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGca                                             <  1:3204447/140‑1 (MQ=255)

                                                                                            gcTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGa                                                         >  2:525338/1‑125 (MQ=255)

                                                                                            gcTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGcacca                                          >  1:3130291/1‑140 (MQ=255)

                                                                                             cTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGCACACAACATCCATGAAACGCATTAGcaccac                                         >  1:3315500/1‑140 (MQ=255)

                                                                                               tCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCAccacca                                       <  2:2342924/140‑1 (MQ=255)

                                                                                                cTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCAt                                      <  2:1121008/140‑1 (MQ=255)

                                                                                                  gAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTa                                    <  1:2997839/140‑1 (MQ=255)

                                                                                                    aCTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTacc                                  <  2:722295/140‑1 (MQ=255)

                                                                                                    aCTGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTacc                                  >  2:1932057/1‑140 (MQ=255)

                                                                                                      tGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTaccac                                <  2:1452917/140‑1 (MQ=255)

                                                                                                      tGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTaccac                                <  1:2447211/140‑1 (MQ=255)

                                                                                                      tGGTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTaccac                                <  1:2240745/140‑1 (MQ=255)

                                                                                                       ggTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTaccacc                               >  2:893842/1‑140 (MQ=255)

                                                                                                        gTTACCTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTaccacca                              >  2:2748518/1‑140 (MQ=255)

                                                                                                            ccTGCCGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACcaccat                          <  1:1866762/140‑1 (MQ=255)

                                                                                                                 cGTGAGTAAATTAAAATTTTATCGACTTGGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTacca                                 >  1:2143342/1‑128 (MQ=255)

                                                                                                                 cGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTacca                                 <  2:2143342/128‑1 (MQ=255)

                                                                                                                 cGTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTacca                                 <  2:1892251/128‑1 (MQ=255)

                                                                                                                  gTGAGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACcaccaccatcac                    >  2:2078090/1‑139 (MQ=255)

                                                                                                                     aGTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTAc                 <  2:2008299/140‑1 (MQ=255)

                                                                                                                      gTAAATTAAAATTTTATCGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTAcc                <  2:480806/140‑1 (MQ=255)

                                                                                                                              aaaTTTTATCGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTaa        <  2:2463670/140‑1 (MQ=255)

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGCTTTTCATTCTGACTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATTGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGC  >  NC_000913/1‑248

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`