| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,645,860 | G→T | G159V (GGT→GTT) | rlmJ → | 23S rRNA m(6)A2030 methyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,645,860 | 0 | G | T | 97.6% | 272.6 / 0.7 | 84 | G159V (GGT→GTT) | rlmJ | 23S rRNA m(6)A2030 methyltransferase |
| Reads supporting (aligned to +/- strand): ref base G (2/0); new base T (65/17); total (67/17) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.96e-01 | |||||||||||
CCTGCAACTGACCGAACTGCACCCGAGCGATTACCCGTTGTTGCGTTCTGAATTTCAGAAAGATAGCCGTGCGCGTGTCGAAAAAGCCGACGG‑TTT‑CCAGCAGCTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGGTTTAATCCTTATCGACCCGCCGTATGAAATGAAAACTGACTATCAAGCGGTGGTCAGCGGGATAGCAGAAGGTTACAAACGTTTCGCCACTGGTATTTACGCACTGTGGTATCCGGTGGTGCTGCGTCAGCAAATT > NC_000913/3645723‑3645996 | ccTGCAACTGACCGAACTGCACCCGAGCGATTACCCGTTGTTGCGTTCTGAATTTCAGAAAGATAGCCGTGCGCGTGTCGAAAAAGCCGACGG‑TTT‑CCAGCAGCTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGttt > 1:701073/1‑140 (MQ=255) gCAACTGACCGAACTGCACCCGAGCGATTACCCGTTGTTGCGTTCTGAATTTCAGAAAGATAGCCGTGCGCGTGTCGAAAAAGCCGACGG‑TTT‑CCAGCAGCTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCAGCCGTGTTTTaa < 2:3140666/140‑1 (MQ=255) caccgaaCCGAACTGCACCCGTGGGATCACCCGTTGTTGCGTTCTGAATTTCAGAAAGATAGCCGTGCGCGTGTCGAAAAAGCCGACGG‑TTT‑CCAGGAGCTTAAGGCCAAA‑TGG‑CCGCCGGTTT‑CCCGCCGTGTTTTAAt < 2:2977337/134‑1 (MQ=255) cAACTGACCGAACTGCACCCGAGCGATTACCCGTTGTTGCGTTCTGAATTTCAGAAAGATAGCCGTGCGCGTGTCGAAAAAGCCGACGG‑TTT‑CCAGCAGCTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAAt < 2:3312953/140‑1 (MQ=255) cAACTGACCGAACTGCACCCGAGCGATTACCCGTTGTTGCGTTCTGAATTTCAGAAAGATAGCCGTGCGCGTGTCGAAAAAGCCGACGG‑TTT‑CCAGCAGCTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAAt < 1:32082/140‑1 (MQ=255) aaCTGACCGAACTGCACCCGAGCGATTACCCGTTGTTGCGTTCTGAATTTCAGAAAGATAGCCGTGCGCGTGTCGAAAAAGCCGACGG‑TTT‑CCAGCAGCTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATc > 1:1718120/1‑140 (MQ=255) aCCGAACTGCACCCGAGCGATTACCCGTTGTTGCGTTCTGAATTTCAGAAAGATAGCCGTGCGCGTGTCGAAAAAGCCGACGG‑TTT‑CCAGCAGCTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTAt > 1:575809/1‑140 (MQ=255) aCCGAACTGCACCCGAGCGATTACCCGTTGTTGCGTTCTGAATTTCAGAAAGATAGCCGTGCGCGTGTCGAAAAAGCCGACGG‑TTT‑CCAGCAGCTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTAt > 1:2404468/1‑140 (MQ=255) aCCGAACTGCACCCGAGCGATTACCCGTTGTTGCGTTCTGAATTTCAGAAAGATAGCCGTGCGCGTGTCGAAAAAGCCGACGG‑TTT‑CCAGCAGCTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTAt > 1:3076885/1‑140 (MQ=255) aCCGAACTGCACCCGAGCGATTACCCGTTGTTGCGTTCTGAATTTCAGAAAGATAGCCGTGCGCGTGTCGAAAAAGCCGACGG‑TTT‑CCAGCAGCTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTAt > 1:379673/1‑140 (MQ=255) aCCGAACTGCACCCGAGCGATTACCCGTTGTTGCGTTCTGAATTTCAGAAAGATAGCCGTGCGCGTGTCGAAAAAGCCGACGG‑TTT‑CCAGCAGCTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTAt > 1:435130/1‑140 (MQ=255) aCCGAACTGCACCCGAGCGATTACCCGTTGTTGCGTTCTGAATTTCAGAAAGATAGCCGTGCGCGTGTCGAAAAAGCCGACGG‑TTT‑CCAGCAGCTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTAt > 1:1572992/1‑140 (MQ=255) aCCGAACTGCACCCGAGCGATTACCCGTTGTTGCGTTCTGAATTTCAGAAAGATAGCCGTGCGCGTGTCGAAAAAGCCGACGG‑TTT‑CCAGCAGCTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTAt > 1:611565/1‑140 (MQ=255) aCCGAACTGCACCCGAGCGATTACCCGTTGTTGCGTTCTGAATTTCAGAAAGATAGCCGTGCGCGTGTCGAAAAAGCCGACGG‑TTT‑CCAGCAGCTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTAt > 1:1395546/1‑140 (MQ=255) aCCGAACTGCACCCGAGCGATTACCCGTTGTTGCGTTCTGAATTTCAGAAAGATAGCCGTGCGCGTGTCGAAAAAGCCGACGG‑TTT‑CCAGCAGCTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTAt > 2:2706981/1‑140 (MQ=255) tGCACCCGAGCGATTACCCGTTGTTGCGTTCTGAATTTCAGAAAGATAGCCGTGCGCGTGTCGAAAAAGCCGACGG‑TTT‑CCAGCAGCTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTATCGACccg > 1:453660/1‑140 (MQ=255) cACCCGAGCGATTACCCGTTGTTGCGTTCTGAATTTCAGAAAGATAGCCGTGCGCGTGTCGAAAAAGCCGACGG‑TTT‑CCAGCAGCTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTATCGACccgcc > 1:946668/1‑140 (MQ=255) cACCCGAGCGATTACCCGTTGTTGCGTTCTGAATTTCAGAAAGATAGCCGTGCGCGTGTCGAAAAAGCCGACGG‑TTT‑CCAGCAGCTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTATCGACccgcc > 1:3061592/1‑140 (MQ=255) cACCCGAGCGATTACCCGTTGTTGCGTTCTGAATTTCAGAAAGATAGCCGTGCGCGTGTCGAAAAAGCCGACGG‑TTT‑CCAGCAGCTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTATCGACccgcc > 1:2470194/1‑140 (MQ=255) cccGAGCGATTACCCGTTGTTGCGTTCTGAATTTCAGAAAGATAGCCGTGCGCGTGTCGAAAAAGCCGACGG‑TTT‑CCAGCAGCTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTATCGACCCGCCGt > 2:811550/1‑140 (MQ=255) ccGAGCGATTACCCGTTGTTGCGTTCTTAATTTCAGAAAGATAGCCGTGCGCGTGTCGAAAAAGCCGACGG‑TTT‑CCAGCAGCTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTATCGACCCGCCGTa > 1:1963028/1‑140 (MQ=255) aGCGATTACCCGTTGTTGCGTTCTGAATTTCAGAAAGATAGCCGTGCGCGTGTCGAAAAAGCCGACGG‑TTT‑CCAGCAGCTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTATCGACCCGCCGTatga > 2:1827292/1‑140 (MQ=255) aGCGATTACCCGTTGTTGCGTTCTGAATTTCAGAAAGATAGCCGTGCGCGTGTCGAAAAAGCCGACGG‑TTT‑CCAGCAGCTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTATCGACCCGCCGTatga > 1:2528504/1‑140 (MQ=255) ttACCCGTTGTTGCGTTCTGAATTTCAGAAAGATAGCCGTGCGCGTGTCGAAAAAGCCGACGG‑TTT‑CCAGCAGCTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTATCGACCCGCCGTatgaaatga > 1:543384/1‑140 (MQ=255) tcccccTTTGTTGCTTTCAAATTTTAAAAAAGATCCCCGGGGGCGTGCAAAAAAACCCGGCGT‑TTC‑CCAG‑AATTTAAAGCCAAACCCG‑CCGCGGTTTC‑CCCGCCGTGTTTTAATCCTTATCGACCCGCCGTatgaaatga < 2:3076885/137‑1 (MQ=255) ccccGTTGTTGCTTTCTGATTTTAAAAAAGATGGCCGTGCGGGTGTAAAAAAACCCGACGT‑TTC‑CCAGCA‑CTTAAGGCCAAACCTG‑CCGCGGTTTC‑CCCGCCGTGTTTTAATCCTTATCGACCCGCCGTAtgaaatgaaa < 2:311176/139‑1 (MQ=255) aCCCGTTGTTGCGTTCTGAATTTCAGAAAGATAGCCGTGCGCGTGTCGAAAAAGCCGACGG‑TTT‑CCAGCAGCTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTATCGACCCGCCGTAtgaaatgaaa > 1:2758251/1‑140 (MQ=255) ttgttgCGTTCTGAATTTCAGAAAGATAGCCGTGCGCGTGTCGAAAAAGCCGACGG‑TTT‑CCAGCAGCTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGT‑GTTTAATCCTTATCGACCCGCCGTATGAAATGAAAACTGAc > 2:995118/1‑140 (MQ=255) ttgttgCGTTCTGAATTTCAGAAAGATAGCCGTGCGCGTGTCGAAAAAGCCGACGG‑TTT‑CCAGCAGCTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGT‑GTTTAATCCTTATCGACCCGCCGTATGAAATGAAAACTGAc > 2:1512526/1‑140 (MQ=255) tgttgCGTTCTGAATTTCAGAAAGATAGCCGTGCGCGTGTCGAAAAAGCCGACGG‑TTT‑CCAGCAGCTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTATCGACCCGCAGTATGAAATGAAAACTGAc > 1:1077435/1‑140 (MQ=255) ttgCGTTCTGAATTTCAGAAAGATAGCCGTGCGCGTGTCGAAAAAGCCGACGG‑TTT‑CCAGCAGCTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTATCGACCCGCCGTATGAAATGAAAACTGACTa > 2:894032/1‑140 (MQ=255) ttgCGTTCTGAATTTCAGAAAGATAGCCGTGCGCGTGTCGAAAAAGCCGACGG‑TTT‑CCAGCAGCTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAAT‑CTTATCGACCCGCCGTATGAAATGAAAACTGACTAt > 1:2198698/1‑140 (MQ=255) tgCGTTCTGAATTTCAGAAAGATAGCCGTGCGCGTGTCGAAAAAGCCGACGG‑TTT‑CCAGCAGCTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTATCGACCCGCCGTATGAAATGAAAACTGACTAt > 1:1321316/1‑140 (MQ=255) cGTTCTGAATTTCAGAAAGATAGCCGTGCGCGTGTCGAAAAAGCCGACGG‑TTT‑CCAGCAGCTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTATCGACCCGCCGTATGAAATGAAAACTGACTATCa > 1:57924/1‑140 (MQ=255) cGTTCTGAATTTCAGAAAGATAGCCGTGCGCGTGTCGAAAAAGCCGACGG‑TTT‑CCAGCAGCTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTATCGACCCGCCGTATGAAATGAAAACTGACTATCa > 1:2005842/1‑140 (MQ=255) gTTCTGAATTTCAGAAAGATAGCCGTGCGCGTGTCGAAAAAGCCGACGG‑TTT‑CCAGCAGCTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTATCGACCCGCCGTATGAAATGAAAACTGACTATCaa > 2:1529729/1‑140 (MQ=255) ttCTGAATTTCAGAAAGATAGCCGTGCGCGTGTCGAAAAAGCCGACGG‑TTT‑CCAGCAGCTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTATCGACCCGCCGTATGAAATGAAAACTGACTATCAAg > 1:1293562/1‑140 (MQ=255) tGAATTTCAGAAAGATAGCCGTGCGCGTGTCGAAAAAGCCGACGG‑TTT‑CCAGCAGCTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTATCGACCCGCCGTATGAAATGAAAACTGACTATCAAGCgg > 1:1039571/1‑140 (MQ=255) tGAATTTCAGAAAGATAGCCGTGCGCGTGTCGAAAAAGCCGACGG‑TTT‑CCAGCAGCTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTATCGACCCGCCGTATGAAATGAAAACTGACTATCAAGCgg > 1:1969366/1‑140 (MQ=255) tGAATTTCAGAAAGATAGCCGTGCGCGTGTCGAAAAAGCCGACGG‑TTT‑CCAGCAGCTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTATCGACCCGCCGTATGAAATGAAAACTGACTATCAAGCgg > 1:1175001/1‑140 (MQ=255) tGAATTTCAGAAAGATAGCCGTGCGCGTGTCGAAAAAGCCGACGG‑TTT‑CCAGCAGCTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTATCGACCCGCCGTATGAAATGAAAACTGACTATCAAGCgg > 1:1094049/1‑140 (MQ=255) tGAATTTCAGAAAGATAGCCGTGCGCGTGTCGAAAAAGCCGACGG‑TTT‑CCAGCAGCTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTATCGACCCGCCGTATGAAATGAAAACTGACTATCAAGCgg > 1:979641/1‑140 (MQ=255) aaTTTCAGAAAGATAGCCGTGCGCGTGTCGAAAAAGCCGACGG‑TTT‑CCAGCAGCTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTATCGACCCGCCGTATGAAATGAAAACTGACTATCAAGCggtg > 1:140885/1‑140 (MQ=255) ttCAGAAAGATAGCCGTGCGCGTGTCGAAAAAGCCGACGG‑TTT‑CCAGCAGCTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTATCGACCCGCCGTATGAAATGAAAACTGACTATCAAGCGGTGGTc > 1:1500593/1‑140 (MQ=255) aaaaaaaGAGAGCCGGGGGGGTG‑CGAAAAAGCCCGCGG‑TTTCCCAGCAG‑TTAAGGCCAAA‑CCG‑CCCCCGGTTTCCCCGCCGTGTTTTAAT‑CTTATCGACCCGCCGTATGAAATGAAAACTGACTATCAAGCGGTGGTCAg < 2:2198698/136‑1 (MQ=255) cAGAAAGATAGCCGTGCGCGTGTCGAAAAAGCCGACGG‑TTT‑CCAGCAGCTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTATCGACCCGCCGTATGAAATGAAAACTGACTATCAAGCGGTGGTCAg > 1:1550951/1‑140 (MQ=255) aaaaaaGATGGCCGGGCGGGTG‑CCAAAAACCCGGCGGTTTT‑CCACCAG‑TTAAGGCCAAACCGG‑CCGCGGTTTC‑CCCGCCGTGTTTTAATCCTTATCGCCCCGCCGTATGAAATGAAAACTGACTATCAAGCGGTGGTCAg < 2:2108376/137‑1 (MQ=255) aaGAAAGATGCCCGGGCGGGTGTAAAAAAAGCCGGGGT‑TTC‑CCAGCA‑TTTAAGGGCAAACCTC‑CCGCCGTTTC‑CCCGCCGTTTTTTAATCCTTATCGACCCGCCGTATGAAATGAAAACTGACTATCAAGCGGTGGTCAg < 2:1039571/139‑1 (MQ=255) aaaGATAGCCGTGCGCGTGTCGAAAAAGCCGACGG‑TTT‑CCAGCAGCTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTATCGACCCGCCGTATGAAATGAAAACTGACTATCAAGCGGTGGTCAGCgg > 1:2415761/1‑140 (MQ=255) aaaGAGAGCCGGGCGCGTGCAAAAAAACCCGAGGT‑TTC‑CCAGCAG‑TTAAAGCCCAA‑CCG‑CCCGCGGTTTCCCCGCGGTTTTTTAATCCTTATCGACCCGCCGTATGAAATGAAAACTGACTATCAAGCGGTGGTCAGCgg < 2:1550951/140‑1 (MQ=255) aGATAGCCGTGCGCGTGTCGAAAAAGCCGACGG‑TTT‑CCAGCAGCTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTATCGACCCGCCGTATGAAATGAAAACTGACTATCAAGCGGTGGTCAGCGGGa > 2:1360975/1‑140 (MQ=255) aGATAGCCGTGCGCGTGTCGAAAAAGCCGACGG‑TTT‑CCAGCAGCTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTATCGACCCGCCGTATGAAATGAAAACTGACTATCAAGCGGTGGTCAGCGGGa > 2:805506/1‑140 (MQ=255) aGATAGCCGTGCGCGTGTCGAAAAAGCCGACGG‑TTT‑CCAGCAGCTTAAGGCCAAA‑CTG‑CCGCCGGATT‑CCCGCCGTGTTTTAATCCTTATCGACCCGCCGTATGAAATGAAAACTGACTATCAAGCGGTGGTCAGCGGGa > 2:3031940/1‑140 (MQ=255) tAGCCGTGCGCGTGTCGAAAAAGCCGACGG‑TTT‑CCAGCAGCTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTATCGACCCGCCGTATGAAATGAAAACTGACTATCAAGCGGTGGTCAGCGGGATAg > 1:2601162/1‑140 (MQ=255) tAGCCGTGCGCGTGTCGAAAAAGCCGACGG‑TTT‑CCAGCAGCTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTATCGACCCGCCGTATGAAATGAAAACTGACTATCAAGCGGTGGTCAGCGGGATAg > 1:2166630/1‑140 (MQ=255) cgggcgcGTGGAAAAAAGGCCGACTT‑TTT‑CGAGCAG‑TTAAGGACAAA‑GCG‑CCCCCGGTTTCCCCGCCGTTTTTTAATCCTTATCGCCCCGCCGTATGAAATGAAAACTGACTATCAAGCGGTGGTCAGCGGGATAGCAGa < 2:2778566/137‑1 (MQ=255) gggcggGTGTAAAAAACGCCGGCGT‑TTC‑CAAGCA‑TTTAAAGCCAAACCCG‑CCGCGGTTTC‑CCCGCCGTTTTTTAATCCTTATCGCCCCGCCGTATGAAATGAAAACTGACTATCAAGCGGTGGTCAGCGGGATAGCAGaa < 2:615775/138‑1 (MQ=255) gTGCGCGTGTCGAAAAAGCCGACGG‑TTT‑CCAGCAGCTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTATCGACCCGCCGTATGAAATGAAAACTGACTATCAAGCGGTGGTCAGCGGGATAGCAGaa > 1:1936852/1‑140 (MQ=255) gTGCGCGTGTCGAAAAAGCCGACGG‑TTT‑CCAGCAGCTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTATCGACCCGCCGTATGAAATGAAAACTGACTATCAAGCGGTGGTCAGCGGGATAGCAGaa > 2:22462/1‑140 (MQ=255) tGCGCGTGTCGAAAAAGCCGACGG‑TTT‑CCAGCAGCTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTATCGACCCGCCGTATGAAATGAAAACTGACTATCAAGCGGTGGTCAGCGGGATAGCAGAAg > 2:1397578/1‑140 (MQ=255) cgcgTGTCGAAAAAGCCGACGG‑TTT‑CCAGCAGCTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTATCGACCCGCCGTATGAAATGAAACCTGACTATCAAGCGGTGGTCAGCGGGATAGCAGAAGGt > 2:2996373/1‑140 (MQ=255) gcgTGTCGAAAAAGCCGACGG‑TTT‑CCAGCAGCTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTATCGACCCGCCGTATGAAATGAAAACTGACTATCAAGCGGTGGTCAGCGGGATAGCAGAAGGtt > 1:494322/1‑140 (MQ=255) gcgTGTCGAAAAAGCCGACGG‑TTT‑CCAGCAGCTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTATCGACCCGCCGTATGAAATGAAAACTGACTATCAAGCGGTGGTCAGCGGGATAGCAGAAGGtt > 1:1112959/1‑140 (MQ=255) gcgTGTCGAAAAAGCCGACGG‑TTT‑CCAGCAGCTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTATCGACCCGCCGTATGAAATGAAAACTGACTATCAAGCGGGGGTCAGCGGGATAGCATAAGGtt > 1:543567/1‑140 (MQ=255) gCCGACGG‑TTT‑CCAGCAGTTTAAGGCAAAC‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTATCGACCCGCCGTATGAAATGAAAACTGACTATCAAGCGGTGGTCAGCGGGATAGCAGAAGGTTACAAACGTTTCGc < 1:1298272/140‑1 (MQ=255) ccGACGG‑TTT‑CCAGCAGCTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTATCGACCCGCCGTATGAAATGAAAACTGACTATCAAGCGGTGGTCAGCGGGATAGCAGAAGGTTACAAACGTTTCGcc > 2:1795662/1‑140 (MQ=255) ttcccAGCGGC‑TAACGCCAAACCGG‑CCGCCGTTTT‑CCCGCCGTGTTTTAATCCTTATCGCCCCGCCGTATGAAATGAAAACTGACTATCAAGCGGTGGTCAGCGGGATAGCAGAAGGTTACAAACGTTTCGCCACTGGTa < 1:1827292/137‑1 (MQ=255) t‑CCAGCAGCTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTATCGACCCGCCGTATGAAATGAAAACTGACTATCAAGCGGTGGTCAGCGGGATAGCAGAAGGTTACAAACGTTTCGCCACTGGTAtt > 2:1988535/1‑140 (MQ=255) gcagtTAAAGCCCAAC‑CTC‑CCGCGGTTTC‑CCCGCCGTGTTTTAATCCTTATCGACCCGCCGTATGAAATGAAAACTGACTATCAAGCGGTGGTCAGCGGGATAGCAGAAGGTTACAAACGTTTCGCCACTGGTATTTACg < 2:2166630/140‑1 (MQ=255) gcatctAAAGCCAAACCCG‑CCGCGGTTTC‑CCCGCCGTGTTTTAATCCTTATCGCCCCGCCGTATGAAATGAAAACTGACTATCAAGCGGTGGTCAGCGGGATAGCAGAAGGTTACAAACGTTTCGCCACTGGTATTTACg < 2:2278443/135‑1 (MQ=255) gcagttAAGGCCAAA‑CCGCCCGCCGTTTC‑CCCGCCGTTTTTTAATCCTTATCGACCCGCCGTATGAAATGAAAACTGACTATCAAGCGGTGGTCAGCGGGATAGCAGAAGGTTACAAACGTTTCGCCACTGGTATTTACg < 1:1005101/136‑1 (MQ=255) gcacctAAAGCCAAA‑CCC‑CCCGCGGTTTCCCCGCCGTTTTTTAATCCTTATCGCCCCGCCGTATGAAATGAAAACTGACTATCAAGCGGTGGTCAGCGGGATAGCAGAAGGTTACAAACGTTTCGCCACTGGTATTTACg < 2:2601162/135‑1 (MQ=255) cagttaaaGGCCAAC‑CCG‑CCGCGGTTTC‑CCCGCCGTGTTTTAATCCTTATCGACCCGCCGTATGAAATGAAAACTGACTATCAAGCGGTGGTCAGCGGGATAGCATAAGGTTACAAACGTTTCGCCACTGGTATTTACGc < 2:1321316/134‑1 (MQ=255) agcTAAAGGCCAAA‑CCG‑CCGCGGGTTC‑CCCGCCGTGTTTTAATCCTTATCGCCCCGCCGTATGAAATGAAAACTGACTATCAAGCGGTGGTCAGCGGGATAGCAGAAGGTTACAAACGTTTCGCCACTGGTATTTACGCa < 1:3070399/140‑1 (MQ=255) gttttaGGCCAAACCCG‑CCGCGGGTTC‑CCCGCCGTGTTTTAACCCTTATCGCCCCGCCGTATGAAATGAAAACTGACTATCAAGCGGTGGTCAGCGGGATAGCAGAAGGTTACAAACGTTTCGCCACTGGTATTTACGCa < 1:3213970/135‑1 (MQ=255) atttAAAGCCAAACCCG‑CCGCCGTTTC‑CCCGCCGTGTTTTAATCTTTATCGACCCGCCGTATGAAATGAAAACTGACTATCAAGCGGTGGTCAGCGGGATAGCAGAAGGTTACAAACGTTTCGCCACTGGTATTTACGCa < 2:43637/138‑1 (MQ=255) attaaaGGCCAAACCTC‑CCGCCTGTTC‑CCCGCCGTTTTTTAACCCTTACCGCCCCGCCGTATGAAATGAAAACTGACTATCAAGCGGTGGTCAGCGGGATAGCAGAAGGTTACAAACGTTTCGCCACTGGTATTTACGCa < 2:979641/136‑1 (MQ=255) cTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTATCGACCCGCCGTATGAAATGAAAACTGACTATCAAGCGGTGGTCAGCGGGATAGCAGAAGGTTACAAACGTTTCGCCACTGGTATTTACGCACt > 2:1907784/1‑140 (MQ=255) cTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTATCGACCCGCCGTATGAAATGAAAACTGACTATCAAGCGGTGGTCAGCGGGATAGCAGAAGGTTACAAACGTTTCGCCACTGGTATTTACGCACt > 1:2760490/1‑140 (MQ=255) cTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTATCGACCCGCCGTATGAAATGAAAACTGACTATCAAGCGGTGGTCAGCGGGATAGCAGAAGGTTACAAACGTTTCGCCACTGGTATTTACGCACt > 1:1250302/1‑140 (MQ=255) cTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTATCGACCCGCCGTATGAAATGAAAACTGACTATCAAGCGGTGGTCAGCGGGATAGCAGAAGGTTACAAACGTTTCGCCACTGGTATTTACGCACt > 1:1454697/1‑140 (MQ=255) cTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTATCGACCCGCCGTATGAAATGAAAACTGACTATCAAGCGGTGGTCAGCGGGATAGCAGAAGGTTACAAACGTTTCGCCACTGGTATTTACGCACt > 1:833665/1‑140 (MQ=255) cTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTATCGACCCGCCGTATGAAATGAAAACTGACTATCAAGCGGTGGTCAGCGGGATAGCAGAAGGTTACAAACGTTTCGCCACTGGTATTTACGCACt > 2:2217324/1‑140 (MQ=255) agggCCAAA‑CGC‑CCGCGGTTTC‑CCCGCCGTGTTTTAATCCTTATCGACCCGCCGTATGAAATGAAAACTGACTATCAAGCGGTGGTCAGCGGGATAGCAGAAGGTTACAAACGTTTCGCCACTGGTATTTACGCACtgtg < 1:2405617/138‑1 (MQ=255) aggcccAAC‑CCG‑CCGCGGTTTC‑CCCGCCGTTTTTTAATCCTTATCGCCCCGCCGTATGAAATGAAAACTGACTATCAAGCGGTGGTCAGCGGGATAGCAGAAGGTTACAAACGTTTCGCCACTGGTATTTACGCACtgtg < 2:57924/136‑1 (MQ=255) ccAAA‑CCG‑CCCGCGGTTTCCCCGCCGTGTTTTAATCCTTATCGCCCCGCCGTATGAAATGAAAACTGACTATCAAGCGGTGGTCAGCGGGATAGCAGAAGGTTACAAACGTTTCGCCACTGGTATTTACGCACTGTGGTa < 2:833665/140‑1 (MQ=255) aa‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTATCGACCCGCCGTATGAAATGAAAACTGACTATCAAGCGGTGGTCAGCGGGATAGCAGAAGGTTACAAACGTTTCGCCACTGGTATTTACGCACTGTGGTATCCg > 1:266193/1‑140 (MQ=255) aa‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTATCGACCCGCCGTATGAAATGAAAACTGACTATCAAGCGGTGGTCAGCGGGATAGCAGAAGGTTACAAACGTTTCGCCACTGGTATTTACGCACTGTGGTATCCg > 1:2343093/1‑140 (MQ=255) aa‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTATCGACCCGCCGTATGAAATGAAAACTGACTATCAAGCGGTGGTCAGCGGGATAGCAGAAGGTTACAAACGTTTCGCCACTGGTATTTACGCACTGTGGTATCCg > 1:2134875/1‑140 (MQ=255) aa‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTATCGACCCGCCGTATGAAATGAAAACTGACTATCAAGCGGTGGTCAGCGGGATAGCAGAAGGTTACAAACGTTTCGCCACTGGTATTTACGCACTGTGGTATCCg > 1:1867888/1‑140 (MQ=255) aa‑CTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTATCGACCCGCCGTATGAAATGAAAACTGACTATCAAGCGGTGGTCAGCGGGATAGCAGAAGGTTACAAACGTTTCGCCACTGGTATTTACGCACTGTGGTATCCg > 2:2731079/1‑140 (MQ=255) ccgg‑ccgcgGTTTC‑CCCGCCGTTTTTTAATCTTTATCGCCCCGCCGTATGAAATGAAAACTGACTATCAAGCGGTGGTCAGCGGGATAGCAGAAGGTTACAAACGTTTCGCCACTGGTATTTACGCACTGTGGTATCCgg < 2:1500593/137‑1 (MQ=255) ccTG‑CCGCCGGTTT‑CCCGCCGTGTTTTAATCCTTATCGACCCCCCGTATGAAATGAAAACTGACTATCAAGCGGTGGTCAGCGGGATAGCAGAAGGTTACAAACGTTTCGCCACTGGTATTTACGCACTGTGGTATCCgg < 2:2974865/139‑1 (MQ=255) ccgcccgcggTTTC‑CCCGCCGTTTTTTAATCCTTATCGCCCCGCCGTATGAAATGAAAACTGACTATCAAGCGGTGGTCAGCGGGATAGCAGAAGGTTACAAACGTTTCGCCACTGGTATTTACGCACTGTGGTATCCgg < 2:494322/136‑1 (MQ=255) ccgccgGTTT‑CCCGCCGTGTTTTAATCCTTATCGACCCGCCGTATGAAATGAAAACTGACTATCAAGCGGTGGTCAGCGGGATAGCAGAAGGTTACAAACGTTTCGCCACTGGTATTTACGCACTGTGGTATccctgtct > 1:2432369/1‑134 (MQ=255) cccGCCGTTTTTAAATCCTTACCGCCCCGCCGTATGAAATGAAAACTGACTATCAAGCGGTGGTCAGCGGGATAGCAGAAGGTTACAAACGTTTCGCCACTGGTATTTACGCACTGTGGTATCCGGTGGTGCTGCGTCAg < 2:1155383/140‑1 (MQ=255) cccGCCGTGTTTTAATCCTTATCGACCCGCCGTATGAAATGAAAACTGACTATCAAGCGGTGGTCAGCGGGATAGCAGAAGGTTACAAACGTTTCGCCACTGGTATTTACGCACTGTGGTATCCGGTGGTGCTGCGTCAg > 1:2449107/1‑140 (MQ=255) ccgccgTGTTTTAATCCTTATCGACCCGCCGTATGAAATGAAAACTGACTATCAAGCGGTGGTCAGCGGGATAGCAGAAGGTTACAAACGTTTCGCCACTGGTATTTACGCACTGTGGTATCCGGTGGTGCTGCGTCAGc > 1:2090679/1‑140 (MQ=255) gtgtTTTAATCCTTATCGACCCGCCGTATGAAATGAAAACTGACTATCAAGCGGTGGTCAGCGGGATAGCAGAAGGTTACAAACGTTTCGCCACTGGTATTTACGCACTGTGGTATCCGGTGGTGCTGCGTCAGCAAAtt > 1:2119241/1‑140 (MQ=255) | CCTGCAACTGACCGAACTGCACCCGAGCGATTACCCGTTGTTGCGTTCTGAATTTCAGAAAGATAGCCGTGCGCGTGTCGAAAAAGCCGACGG‑TTT‑CCAGCAGCTTAAGGCCAAA‑CTG‑CCGCCGGTTT‑CCCGCCGTGGTTTAATCCTTATCGACCCGCCGTATGAAATGAAAACTGACTATCAAGCGGTGGTCAGCGGGATAGCAGAAGGTTACAAACGTTTCGCCACTGGTATTTACGCACTGTGGTATCCGGTGGTGCTGCGTCAGCAAATT > NC_000913/3645723‑3645996 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |