Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,399,556 Δ1 bp coding (610/2727 nt) nuoG ← NADH:quinone oxidoreductase subunit G

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,399,5550C.100.0% 428.4 / NA 99coding (611/2727 nt)nuoGNADH:quinone oxidoreductase subunit G
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base . (44/55);  total (44/55)

Only 100 of 105 total aligned reads displayed.

TTCGATACGACGCAGTTCGCCGTAACGTTCACCGGGGCTGATGTTACAGCCGATGGAACATTGCTGGCAGATGCTCGGCGCAAACTGCATATCCCATTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACGCCGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTAAACGCCCAGATCTGTACCGTCAGCGTAATCTTTGTA  >  NC_000913/2399416‑2399685
                                                                                                                                           |                                                                                                                                  
ttCGATACGACGCAGTTCGCCGTAACGTTCACCGGGGCTGATGTTACAGCCGATGGAACATTGCTGGCAGATGCTCGGCGCAAACTGCATATCCCATTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACGc                                                                                                                                    >  1:762396/1‑140 (MQ=255)
ttCGATACGACGCAGTTCGCCGTAACGTTCACCGGGGCTGATGTTACAGCCGATGGAACATTGCTGGCAGATGCTCGGCGCAAACTGCATATCCCATTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACGc                                                                                                                                    >  2:90209/1‑140 (MQ=255)
   gATACGACGCAGTTCGCCGTAACGTTCACCGGGGCTGATGTTACAGCCGATGGAACATTGCTGGCAGATGCTCGGCGCAAACTGCATATCCCATTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACGcggt                                                                                                                                 <  1:1043494/140‑4 (MQ=255)
   gATACGACGCAGTTCGCCGTAACGTTCACCGGGGCTGATGTTACAGCCGATGGAACATTGCTGGCAGATGCTCGGCGCAAACTGCATATCCCATTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACGcggt                                                                                                                                 <  1:821264/140‑4 (MQ=255)
        gacgCAGTTCGCCGTAACGTTCACCGGGGCTGATGTTACAGCCGATGGAACATTGCTGGCAGATGCTCGGCGCAAACTGCATATCCCATTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGc                                                                                                                           <  2:694600/140‑1 (MQ=255)
               ttCGCCGTAACGTTCACCGGGGCTGATGTTACAGCCGATGGAACATTGCTGGCAGATGCTCGGCGCAAACTGCATATCCCATTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTc                                                                                                                    >  1:239984/1‑140 (MQ=255)
               ttCGCCGTAACGTTCACCGGGGCTGATGTTACAGCCGATGGAACATTGCTGGCAGATGCTCGGCGCAAACTGCATATCCCATTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTc                                                                                                                    <  2:280757/140‑1 (MQ=255)
                tCGCCGTAACGTTCACCGGGGCTGATGTTACAGCCGATGGAACATTGCTGGCAGATGCTCGGCGCAAACTGCATATCCCATTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCg                                                                                                                   <  2:706089/140‑1 (MQ=255)
                    cGTAACGTTCACCGGGGCTGATGTTACAGCCGATGGAACATTGCTGGCAGATGCTCGGCGCAAACTGCATATCCCATTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCa                                                                                                               >  2:167587/1‑140 (MQ=255)
                    cGTAACGTTCACCGGGGCTGATGTTACAGCCGATGGAACATTGCTGGCAGATGCTCGGCGCAAACTGCATATCCCATTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCa                                                                                                               >  1:901305/1‑140 (MQ=255)
                       aaCGTTCATCGGGGCTGATGTTACAGCCGCCAGAACCTTGCTGGCAGTTGCACAGCGCAAACGGCATATACCATTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGt                                                                                                            >  2:322078/1‑140 (MQ=255)
                        aCGTTCACCGGGGCTGATGTTACAGCCGATGGAACATTGCTGGCAGATGCTCGGCGCAAACTGCATATCCCATTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGtt                                                                                                           <  1:705027/140‑1 (MQ=255)
                           ttCACCGGGGCTGATGTTACAGCCGATGGAACATTGCTGGCAGATGCTCGGCGCAAACTGCATATCCCATTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTAcc                                                                                                        >  1:231880/1‑140 (MQ=255)
                                cGGGGCTGATGTTACAGCCGATGGAACATTGCTGGCAGATGCTCGGCGCAAACTGCATATCCCATTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGa                                                                                                                  >  2:186390/1‑125 (MQ=255)
                                cGGGGCTGATGTTACAGCCGATGGAACATTGCTGGCAGATGCTCGGCGCAAACTGCATATCCCATTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGa                                                                                                                  <  1:186390/125‑1 (MQ=255)
                                cGGGGCTGATGTTACAGCCGATGGAACATTGCTGGCAGATGCTCGGCGCAAACTGCATATCCCATTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGaaa                                                                                                   >  2:772937/1‑140 (MQ=255)
                                cGGGGCTGATGTTACAGCCGATGGAACATTGCTGGCAGATGCTCGGCGCAAACTGCATATCCCATTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGaaa                                                                                                   >  2:663716/1‑140 (MQ=255)
                                  gggCTGATGTTACAGCCGATGGAACATTGCTGGCAGATGCTCGGCGCAAACTGCATATCCCATTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAAt                                                                                                 <  1:1312096/140‑1 (MQ=255)
                                       gATGTTACAGCCGATGGAACATTGCTGGCAGATGCTCGGCGCAAACTGCATATCCCATTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCt                                                                                            <  1:942144/140‑1 (MQ=255)
                                        aTGTTACAGCCGATGGAACATTGCTGGCAGATGCTCGGCGCAAACTGCATATCCCATTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCtt                                                                                           >  1:456838/1‑140 (MQ=255)
                                        aTGTTACAGCCGATGGAACATTGCTGGCAGATGCTCGGCGCAAACTGCATATCCCATTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCtt                                                                                           >  2:434684/1‑140 (MQ=255)
                                         tGTTACAGCCGATGGAACATTGCTGGCAGATGCTCGGCGCAAACTGCATATCCCATTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCttt                                                                                          <  1:760581/140‑1 (MQ=255)
                                                gCCGATGGAACATTGCTGGCAGATGCTCGGCGCAAACTGCATATCCCATTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGt                                                                                   <  2:677795/140‑1 (MQ=255)
                                                 ccGATGGAACATTGCTGGCAGATGCTCGGCGCAAACTGCATATCCCATTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTg                                                                                  >  1:655645/1‑140 (MQ=255)
                                                  cGATGGAACATTGCTGGCAGATGCTCGGCGCAAACTGCATATCCCATTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGc                                                                                 >  1:951864/1‑140 (MQ=255)
                                                  cGATGGAACATTGCTGGCAGATGCTCGGCGCAAACTGCATATCCCATTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGc                                                                                 >  2:1271672/1‑140 (MQ=255)
                                                  cGATGGAACATTGCTGGCAGATGCTCGGCGCAAACTGCATATCACATTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGc                                                                                 <  1:627314/140‑1 (MQ=255)
                                                    aTGGAACATTGCTGGCAGATGCTCGGCGCAAACTGCATATCCCATTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCg                                                                               >  1:920779/1‑140 (MQ=255)
                                                    aTGGAACATTGCTGGCAGATGCTCGGCGCAAACTGCATATCCCATTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCg                                                                               >  1:103438/1‑140 (MQ=255)
                                                     tGGAACATTGCTGGCAGATGCTCGGCGCAAACTGCATATCCCATTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGt                                                                              >  1:274127/1‑140 (MQ=255)
                                                          cATTGCTGGCAGATGCTCGGCGCAAACTGCATATCCCATTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTcc                                                                         >  2:179773/1‑140 (MQ=255)
                                                             tGCTGGCAGATGCTCGGCGCAAACTGCATATCCCATTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCggg                                                                      >  2:1067226/1‑140 (MQ=255)
                                                                tGGCAGATGCTCGGCGCAAACTGCATATCCCATTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGa                                                                   <  1:1067226/140‑1 (MQ=255)
                                                                tGGCAGATGCTCGGCGCAAACTGCATATCCCATTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGa                                                                   <  2:38938/140‑1 (MQ=255)
                                                                tGGCAGATGCTCGGCGCAAACTGCATATCCCATTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGa                                                                   <  2:901305/140‑1 (MQ=255)
                                                                 ggCAGATGCTCGGCGCAAACTGCATATCCCATTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGAc                                                                  <  2:231880/140‑1 (MQ=255)
                                                                 ggCAGATGCTCGGCGCAAACTGCATATCCCATTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGAc                                                                  <  2:239984/140‑1 (MQ=255)
                                                                 ggCAGATGCTCGGCGCAAACTGCATATCCCATTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGAc                                                                  <  1:1271672/140‑1 (MQ=255)
                                                                 ggCAGATGCTCGGCGCAAACTGCATATCCCATTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGAc                                                                  <  2:755801/140‑1 (MQ=255)
                                                                 ggCAGATGCTCGGCGCAAACTGCATATCCCATTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGAc                                                                  <  1:1059225/140‑1 (MQ=255)
                                                                    aGATGCTCGGCGCAAACTGCATATCCCATTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGa                                                                   <  1:936307/136‑1 (MQ=255)
                                                                    aGATGCTCGGCGCAAACTGCATATCCCATTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGa                                                                   >  2:936307/1‑136 (MQ=255)
                                                                     gATGCTCGGCGCAAACTGCATATCCCATTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGaa                                                              <  2:762396/140‑1 (MQ=255)
                                                                       tGCTCGGCGCAAACTGCATATCCCATTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGt                                                            <  2:681585/140‑1 (MQ=255)
                                                                       tGCTCGGCGCAAACTGCATATCCCATTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGt                                                            >  1:1353802/1‑140 (MQ=255)
                                                                       tGCTCGGCGCAAACTGCATATCCCATTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGt                                                            >  2:1242186/1‑140 (MQ=255)
                                                                        gCTCGGCGNAAACTGCATATCCCATTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAANTTCGCTTNCCAGCGTGCCGTCTTNCGGGCGNCCGAAGTa                                                           >  2:1329213/1‑140 (MQ=255)
                                                                          tCGGCGCAAACTGCATATCCCATTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGa                                                         <  2:456838/140‑1 (MQ=255)
                                                                            ggCGCAAACTGCATATCCCATTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACg                                                       >  1:36257/1‑140 (MQ=255)
                                                                              cgcAAACTGCATATCCCATTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGtt                                                     >  1:530844/1‑140 (MQ=255)
                                                                              cgcAAACTGCATATCCCATTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGtt                                                     <  1:772937/140‑1 (MQ=255)
                                                                                    cTGCATATCCCATTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTg                                               <  1:663716/140‑1 (MQ=255)
                                                                                    cTGCATATCCCATTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTg                                               <  2:655645/140‑1 (MQ=255)
                                                                                              cATTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCATGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTaa                                     <  1:1095528/140‑1 (MQ=255)
                                                                                              cATTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGTGCACCGTaa                                     <  1:1063295/140‑1 (MQ=255)
                                                                                              cATTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGTGCACCGTaa                                     >  2:1063295/1‑140 (MQ=255)
                                                                                              cATTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTaa                                     <  1:1242186/140‑1 (MQ=255)
                                                                                               aTTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTaaa                                    >  2:618621/1‑140 (MQ=255)
                                                                                               aTTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTaaa                                    >  1:1325355/1‑140 (MQ=255)
                                                                                               aTTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTaaa                                    >  2:166576/1‑140 (MQ=255)
                                                                                               aTTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTCACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTaaa                                    >  1:1137410/1‑140 (MQ=255)
                                                                                                tttACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTAAAc                                   >  2:192237/1‑140 (MQ=255)
                                                                                                 ttACGGTTGTAACGCTCGGAGTGTGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTaa                                     <  2:904279/137‑1 (MQ=255)
                                                                                                 ttACGGTTGTAACGCTCGGAGTGTGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTaa                                     >  1:904279/1‑137 (MQ=255)
                                                                                                 ttACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTaaa                                    <  1:1349831/138‑1 (MQ=255)
                                                                                                 ttACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTaaa                                    >  2:1349831/1‑138 (MQ=255)
                                                                                                 ttACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTAAACg                                  >  2:847607/1‑140 (MQ=255)
                                                                                                   aCGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTAAACGcc                                <  1:434684/140‑1 (MQ=255)
                                                                                                   aCGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTAAACGcc                                <  1:312854/140‑1 (MQ=255)
                                                                                                   aCGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTAAACGcc                                <  1:159804/140‑1 (MQ=255)
                                                                                                   aCGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTAAACGcc                                <  1:461268/140‑1 (MQ=255)
                                                                                                   aCGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTAAACGcc                                <  1:674958/140‑1 (MQ=255)
                                                                                                   aCGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTAAACGcc                                <  2:530844/140‑1 (MQ=255)
                                                                                                   aCGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTCACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTAAACGcc                                <  2:1137410/140‑1 (MQ=255)
                                                                                                     ggTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTAAACGCCCa                              <  2:1353802/140‑1 (MQ=255)
                                                                                                     ggTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTAAACGCCCa                              <  1:1329213/140‑1 (MQ=255)
                                                                                                       ttGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTAAACGCCCAGa                            <  2:103438/140‑1 (MQ=255)
                                                                                                       ttGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTAAACGCCCAGa                            <  2:920779/140‑1 (MQ=255)
                                                                                                         gTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTAAACGCCCAGATc                          <  1:1256568/140‑1 (MQ=255)
                                                                                                         gTAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTAAACGCCCAGATc                          >  1:253259/1‑140 (MQ=255)
                                                                                                          tAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTAAACGcc                                <  2:1148717/133‑1 (MQ=255)
                                                                                                          tAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTAAACGcc                                >  1:1148717/1‑133 (MQ=255)
                                                                                                          tAACGCTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTAAACGCCCAGATCt                         >  2:187156/1‑140 (MQ=255)
                                                                                                               cTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTAAACGcc                                >  1:710969/1‑128 (MQ=255)
                                                                                                               cTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTAAACGcc                                <  2:710969/128‑1 (MQ=255)
                                                                                                               cTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTAAACGCCCAGATCTGTAcc                    >  2:759236/1‑140 (MQ=255)
                                                                                                               cTCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTAAACGCCCAGATCTGTAcc                    >  2:888703/1‑140 (MQ=255)
                                                                                                                tCGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACGGAAGTAGACGTTGTCGTGCGCACCGTAAACGCCCAGATCTGTACCg                   <  1:41451/140‑1 (MQ=255)
                                                                                                                 cGGAGTGCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTAAACGCCCAGATc                          >  1:999664/1‑132 (MQ=255)
                                                                                                                       gCGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTAAACGCCCAGATCTGTACCGTCAGCGt            <  1:322078/140‑1 (MQ=255)
                                                                                                                        cGTTTTGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGTACCGTAAACGCCCAGATCTGTACCGTCAGCGTa           >  2:1109590/1‑140 (MQ=255)
                                                                                                                        cGTTTTGTCGGTAAATACG‑CGGTCGGACAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTAAACGCCCAGATCTGTACCGTCAGCGTa           >  1:185537/1‑140 (MQ=255)
                                                                                                                          ttttGTCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTAAACGCCCAGATCTGTACCGTCAGCGTAAt         >  1:1315701/1‑140 (MQ=255)
                                                                                                                          ttttGTCGGTAAATACG‑CGGTCGGACAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTAAACGCCCAGATCTGTACCGTCAGCGTAAt         <  2:185537/140‑1 (MQ=255)
                                                                                                                               tCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTAAACGCCCAGATCTGTACCGTCAGCGTAATCTTTg    <  2:458390/140‑1 (MQ=255)
                                                                                                                               tCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTAAACGCCCAGATCTGTACCGTCAGCGTAATCTTTg    <  2:1315701/140‑1 (MQ=255)
                                                                                                                               tCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTAAACGCCCAGATCTGTACCGTCAGCGTAATCTTTg    <  2:253259/140‑1 (MQ=255)
                                                                                                                               tCGGTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTAAACGCCCAGATCTGTACCGTCAGCGTAATCTTTg    >  1:458390/1‑140 (MQ=255)
                                                                                                                                 ggTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTAAACGCCCAGATCTGTACCGTCAGCGTAATCTTTgta  <  1:618621/140‑1 (MQ=255)
                                                                                                                                 ggTAAATACG‑CGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTAAACGCCCAGATCTGTACCGTCAGCGTAATCTTTgta  <  2:36257/140‑1 (MQ=255)
                                                                                                                                           |                                                                                                                                  
TTCGATACGACGCAGTTCGCCGTAACGTTCACCGGGGCTGATGTTACAGCCGATGGAACATTGCTGGCAGATGCTCGGCGCAAACTGCATATCCCATTTACGGTTGTAACGCTCGGAGTGCGTTTTGTCGGTAAATACGCCGGTCGGGCAAATTTCGACCAGGTTACCGGAAAATTCGCTTTCCAGCGTGCCGTCTTCCGGGCGACCGAAGTAGACGTTGTCGTGCGCACCGTAAACGCCCAGATCTGTACCGTCAGCGTAATCTTTGTA  >  NC_000913/2399416‑2399685

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑