BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1207790 =	97 (1.180)	20 (0.280)	18/244	2.5	20.0%	coding (290/630 nt)	ycfK	e14 prophage; protein StfP
*	?	NC_000913	1209619 =	74 (1.020)	20 (0.280)	18/244	2.5	20.0%	pseudogene (37/537 nt)	stfE	e14 prophage; putative side tail fiber protein fragment

Only 100 of 104 total aligned reads displayed.

GGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTG  >  NC_000913/1209480‑1209757

ggATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAAc                                                                                                                                            <  2:630094/140‑1 (MQ=255)

          ttGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAAGGttttcgaga                                                                                                                                  <  2:650224/140‑7 (MQ=255)

           tGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAAc                                                                                                                                            <  1:646383/129‑1 (MQ=255)

           tGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAAc                                                                                                                                            >  2:646383/1‑129 (MQ=255)

           tGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAAGGttttcgagag                                                                                                                                 >  2:933180/1‑133 (MQ=255)

           tGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGaaaa                                                                                                                                 >  1:395627/1‑140 (MQ=255)

           tGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGaaaa                                                                                                                                 >  2:1113341/1‑140 (MQ=255)

           tGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGaaaa                                                                                                                                 >  1:21153/1‑140 (MQ=255)

           tGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGaaaa                                                                                                                                 >  1:135042/1‑140 (MQ=255)

           tGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGaaa                                                                                                                                  <  2:1333656/139‑1 (MQ=255)

           tGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGaaa                                                                                                                                  >  1:1333656/1‑139 (MQ=255)

            gCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGAAAAt                                                                                                                                >  1:910168/1‑140 (MQ=255)

            gCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGAAAAt                                                                                                                                >  2:369926/1‑140 (MQ=255)

                gTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATgaag                                                                                                                            <  1:618402/140‑1 (MQ=255)

                           tcttcAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGc                                                                                                                 >  2:240821/1‑140 (MQ=255)

                           tcttcAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGc                                                                                                                 >  2:1127523/1‑140 (MQ=255)

                            cttcAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCa                                                                                                                <  2:222853/140‑1 (MQ=255)

                            cttcAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCa                                                                                                                >  1:268417/1‑140 (MQ=255)

                            actgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACaa                                                                                                                   >  1:1163395‑M2/115‑140 (MQ=255)

                             ttcAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCaa                                                                                                               >  2:1353636/1‑140 (MQ=255)

                               gaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCa                                                                                                                >  2:527164‑M2/112‑140 (MQ=255)

                                   agAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGca                                                                                                         <  2:248874/140‑1 (MQ=255)

                                    gAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGcat                                                                                                        <  2:395627/140‑1 (MQ=255)

                                    gAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGcat                                                                                                        >  2:834322/1‑140 (MQ=255)

                                     aaaaaGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGcatc                                                                                                       >  2:1240321/1‑140 (MQ=255)

                                     aaaaaGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGcatc                                                                                                       >  1:848482/1‑140 (MQ=255)

                                       aaaGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGcatcat                                                                                                     >  1:624737/1‑140 (MQ=255)

                                         aGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTc                                                                                                   <  2:722786/140‑1 (MQ=255)

                                         aGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACAAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTc                                                                                                   <  2:1314114/140‑1 (MQ=255)

                                              cACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCt                                                                                              <  2:261286/140‑1 (MQ=255)

                                               aCCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGcat                                                                                                        >  2:1146220/1‑129 (MQ=255)

                                               aCCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGcat                                                                                                        <  1:1146220/129‑1 (MQ=255)

                                                tcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGc                                                                                               >  1:366625‑M2/95‑140 (MQ=255)

                                                    taccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCtttt                                                                                           >  1:1382647‑M2/91‑140 (MQ=255)

                                                      cATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAg                                                                                      <  1:1113341/140‑1 (MQ=255)

                                                       aTTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAgg                                                                                     <  1:1149269/140‑1 (MQ=255)

                                                       aTTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAgg                                                                                     <  1:1240321/140‑1 (MQ=255)

                                                          caatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAgg                                                                                     <  1:527164‑M2/56‑1 (MQ=255)

                                                           cagccagcCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGa                                                                                 >  1:243512/1‑140 (MQ=255)

                                                           cagccagcCTGTTCGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGa                                                                                 >  1:1161974/1‑140 (MQ=255)

                                                             tcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAggggg                                                                                  <  2:1163395‑M2/59‑1 (MQ=255)

                                                              ccagccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCt                                                                                              >  2:1392652/1‑124 (MQ=255)

                                                              ccagccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCt                                                                                              <  1:1392652/124‑1 (MQ=255)

                                                              ccagccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAgg                                                                                     <  1:980900/133‑1 (MQ=255)

                                                                  ccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTa                                                                             >  1:730731/1‑140 (MQ=255)

                                                                  ccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACa                                                                          >  1:742035/1‑140 (MQ=255)

                                                                  ccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACa                                                                          <  2:268417/140‑1 (MQ=255)

                                                                      ttGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCt                                                                      <  2:1161974/140‑1 (MQ=255)

                                                                       tatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATg                                                                        >  2:155983‑M2/72‑140 (MQ=255)

                                                                        ggCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACACGCAAATGGCCTCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTa                                                                    <  2:809311/140‑1 (MQ=255)

                                                                        ggCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTa                                                                    <  2:910168/140‑1 (MQ=255)

                                                                        ggCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTa                                                                    <  2:135042/140‑1 (MQ=255)

                                                                         gCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCt                                                                      <  2:730731/140‑1 (MQ=255)

                                                                            gAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTgg                                                                >  2:1254499/1‑140 (MQ=255)

                                                                            gAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTgg                                                                >  1:1263316/1‑140 (MQ=255)

                                                                            gAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTgg                                                                <  2:21153/140‑1 (MQ=255)

                                                                            gAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTgg                                                                <  1:1353636/140‑1 (MQ=255)

                                                                             aGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGc                                                               >  1:108864/1‑140 (MQ=255)

                                                                              gTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCt                                                              <  1:240821/140‑1 (MQ=255)

                                                                              gTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCt                                                              >  1:213947/1‑140 (MQ=255)

                                                                              atgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTg                                                                 >  2:716996‑M2/65‑140 (MQ=255)

                                                                               tgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTgg                                                                <  1:155983‑M2/77‑1 (MQ=255)

                                                                               tGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAGATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACa                                                                          <  2:438178/127‑1 (MQ=255)

                                                                               tGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAGATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACa                                                                          >  1:438178/1‑127 (MQ=255)

                                                                                gaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGc                                                               >  1:864101‑M2/63‑140 (MQ=255)

                                                                                   tGAAGGCCACGGAACCGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTa                                                         <  2:108864/140‑1 (MQ=255)

                                                                                       gtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTAc                                                        >  2:203306‑M2/56‑140 (MQ=255)

                                                                                         ccACGGAACCGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTgg                                                                >  1:562005/1‑127 (MQ=255)

                                                                                         ccACGGAACCGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTgg                                                                <  2:562005/127‑1 (MQ=255)

                                                                                            cGGAACCGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATca                                                >  1:126097/1‑140 (MQ=255)

                                                                                                  cGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAAt                                          >  1:785057/1‑140 (MQ=255)

                                                                                                  cGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAAt                                          <  2:742035/140‑1 (MQ=255)

                                                                                                    ggACACCAACAGGT‑AT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGAc                                       <  2:701632/140‑1 (MQ=255)

                                                                                                     gACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGAc                                       <  2:848482/140‑1 (MQ=255)

                                                                                                       ccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGa                                        >  1:434645‑M2/40‑140 (MQ=255)

                                                                                                        cgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGAc                                       <  1:1131830‑M2/102‑1 (MQ=255)

                                                                                                         ccAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGa                                   >  1:635640/1‑140 (MQ=255)

                                                                                                            gctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGa                                   >  2:1330426‑M2/35‑140 (MQ=255)

                                                                                                            aCAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAaca                                <  1:784561/140‑1 (MQ=255)

                                                                                                            aCAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAaca                                <  1:1254499/140‑1 (MQ=255)

                                                                                                            aCAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAaca                                <  2:126097/140‑1 (MQ=255)

                                                                                                               ggTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAg                             <  2:624737/140‑1 (MQ=255)

                                                                                                                 tAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGAt                           <  1:834322/140‑1 (MQ=255)

                                                                                                                  ttgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAg                             <  2:864101‑M2/112‑1 (MQ=255)

                                                                                                                  ttgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAg                             <  1:372976‑M2/112‑1 (MQ=255)

                                                                                                                    t‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTa                        >  2:1231484/1‑140 (MQ=255)

                                                                                                                    t‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTa                        >  2:107070/1‑140 (MQ=255)

                                                                                                                    gagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGAt                           >  1:911135‑M2/27‑140 (MQ=255)

                                                                                                                       ttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTa                        <  2:1382647‑M2/117‑1 (MQ=255)

                                                                                                                             gCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGt                  >  1:746733/1‑140 (MQ=255)

                                                                                                                              ccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTa                 <  2:746733‑M2/124‑1 (MQ=255)

                                                                                                                              ccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTa                 <  2:550666‑M2/124‑1 (MQ=255)

                                                                                                                              ccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTa                 <  2:243512‑M2/124‑1 (MQ=255)

                                                                                                                                  ctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATgc             >  1:1265536‑M2/13‑140 (MQ=255)

                                                                                                                                   tcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATgcg            >  2:269151‑M2/12‑140 (MQ=255)

                                                                                                                                     ccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCt          <  2:635640‑M2/131‑1 (MQ=255)

                                                                                                                                        aaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGaa       >  2:217085‑M2/7‑140 (MQ=255)

                                                                                                                                        aaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGaa       >  2:376415‑M2/7‑140 (MQ=255)

                                                                                                                                         accaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAAc      <  1:1330426‑M2/135‑1 (MQ=255)

                                                                                                                                             aCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACtgtg  >  2:596513‑M2/2‑140 (MQ=255)

GGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAT‑‑‑GCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTG  >  NC_000913/1209480‑1209757

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.