Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 300,772 | 0 | C | A | 55.7% | 18.5 / 255.0 | 131 | G55C (GGT→TGT) | paoC | aldehyde dehydrogenase: molybdenum cofactor‑binding subunit |
Reads supporting (aligned to +/- strand): ref base C (28/30); new base A (28/45); total (56/75) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 2.89e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
Only 100 of 148 total aligned reads displayed.
CTAACAGCCTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCCGTATC‑AAGGGCGGTGAGGCGTCCTTTGGCAATGGCGGAACCGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCGGTCCGTCGATGCGGTCATGGGGACGACCGACAACCTTCAGCTGATCGATCGGGTT > NC_000913/300634‑300907 | cTAACAGCCTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCCGTATC‑AAGGGCGGTGAGGCGTCCTTTGGCAATGGCGGAACcg < 1:1052207/140‑1 (MQ=255) tAACAGCCTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCCGTATC‑AAGGGCGGTGAGGCGTCCTTTGGCAATGGTGGAACcga < 1:1434840/140‑1 (MQ=255) tAACAGCCTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCCGTATC‑AAGGGCGGTGAGGCGTCCTTTGGCAATGGCGGAACcga < 2:1451537/140‑1 (MQ=255) tAACAGCCTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCCGTATC‑AAGGGCGGTGAGGCGTCCTTTGGCAATGGCGGAACcga < 1:2137962/140‑1 (MQ=255) tAACAGCCTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCCGTATC‑AAGGGCGGTGAGGCGTCCTTTGGCAATGGCGGAACcga < 1:1677656/140‑1 (MQ=255) tAACAGCCTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCCGTATC‑AAGGGCGGTGAGGCGTCCTTTGGCAATGGCGGAACcga < 1:1500822/140‑1 (MQ=255) tAACAGCCTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGGAATGACAACCCGGACCCCCCGCGCCTTTTTTGCGGGGGCCCCGTC‑AAAGGGGGGGGGGGGGCCCTTGGCAATGGCGGGAcccc > 2:1245538/1‑138 (MQ=255) aGCCTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCCGTATC‑AAGGGCGGTGAGGCGTCCTTTGGCAATGGCGGAACCGACGat < 2:2337248/140‑1 (MQ=255) aGCCTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCCGTATC‑AAGGGCGGTGAGGCGTCCTTTGGCAATGGCGGAACAGACGat < 2:426185/140‑1 (MQ=255) gCCTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCCGTATC‑AAGGGCGGTGAGGCGTCCTTTGGCAATGGCGGAACAGACGata < 2:531711/140‑1 (MQ=255) gCCTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCCGTATC‑AAGGGCGGTGAGGCGTCCTTTGGCAATGGCGGAACAGACGata < 1:1880988/140‑1 (MQ=255) cTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCCGTATC‑AAGGGCGGTGAGGCGTCCTTTGGCAATGGCGGAACAGACGAtata < 1:1484278/140‑1 (MQ=255) tGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGGAATGAAAACCAGGACCGCCCCCGCCTTTTTGGGGGCGGCCGGATC‑AAAGGGGGGGGGGCGCCCCTTTGCAGAGGCGGGACcgccgagttag > 2:1385813/1‑135 (MQ=255) ggCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGTAATGACAGCCCGGTCGCCCCGCGCCTTTTTTGCGGCGGCCCGCTCAAAGGGGGGGGGGGGGCCCTTTGGC‑ATGGGGGGACCGCCGGtataac > 2:900415/1‑138 (MQ=255) gtTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCCGTATC‑AAGGGCGGTGAGGCGTCCTTTGGCAATGGCGGAACAGACGATATAGCCATAgg < 1:738459/140‑1 (MQ=255) ttttGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCCGTATC‑AAGGGCGGTGAGGCGTCCTTTGGCAATGGCGGAACAGACGATATAGCCATAggcg < 1:2307684/140‑1 (MQ=255) ttttGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCCGTATC‑AAGGGCGGTGAGGCGTCCTTTGGCAATGGCGGAACAGACGATATAGCCATAggcg < 1:209565/140‑1 (MQ=255) tCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCCGTATC‑AAGGGCGGTGAGGCGTCCTTTGGCAATGGCGGAACAGACGATATAGCCATAGGCGGCGtt < 1:288835/140‑1 (MQ=255) cGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCCGTATC‑AAGGGCGGTGAGGCGTCCTTTGGCAATGGCGGAACCGACGATATAGCCATAGGCGGCGTTg < 2:415787/140‑1 (MQ=255) tttGCCGAGTGCCCCGGCGTTACTGGCGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCCGTATC‑AAGGGCGGTGAGGCGTCCTTTGGCAATGGCGGAACAGACGATATAGCCATAGGCGGCGTTggggg < 1:1683161/140‑1 (MQ=255) tttGCCGAGTGCCCCGGCGTTACTGGCGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCCGTATC‑AAGGGCGGTGAGGCGTCCTTTGGCAATGGCGGAACAGACGATATAGCCATAGGCGGCGTTggggg < 1:789823/140‑1 (MQ=255) ttGCCGAGTGCCCCGGCGTTACTGGCGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCCGTATC‑AAGGGCGGTGAGGCGTCCTTTGGCAATGGCGGAACCGACGATATAGCCATAGGCGGCGTTGGGGGc < 2:1279651/140‑1 (MQ=255) gTGCCCCGGCGTTACTGGCGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCCGTATC‑AAGGGCGGTGAGGCGTCCTTTGGCAATGGCGGAACAGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCa < 1:953480/140‑1 (MQ=255) gTGCCCCGGCGTTACTGGCGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCCGTATC‑AAGGGCGGTGAGGCGTCCTTTGGCAATGGCGGAACAGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCa < 1:661124/140‑1 (MQ=255) tGCCCCGGCGTTACTGGCGGTAATAACAGCCCGTACGCCCCGCGCTTTTTTCGCGGCGGCCGCATC‑AAGGGCGGGGAGGCGGCCTTTGGCAATGGCGGGACCCCCGAAATAACCATAAGCGGGGGTGGGGGGTTCTTTAt > 2:2217016/1‑140 (MQ=255) gCCCCGGCGTTACTGGCGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCCGTATC‑AAGGGCGGTGAGGCGTCCTTTGGCAATGGCGGAACAGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATg < 1:1487615/140‑1 (MQ=255) ccccGGCGTTACTGGCGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCCGTATC‑AAGGGCGGTGAGGCGTCCTTTGGCAATGGCGGAACAGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGc < 2:549164/140‑1 (MQ=255) ccccGGCGTTACTGGCGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCCGTATC‑AAGGGCGGTGAGGCGTCCTTTGGCAATGGCGGAACAGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGc < 1:1610029/140‑1 (MQ=255) ccccGGCGTTACTGGCGGTAATGACAGCCAGTACGCCCCGCGCTTTTTTCGCGGCGGCCGTATC‑AAGGGCGGGGAGGCGTCCTTTGGCAATGGCGGGACCGACGATATAGCCATAGGGGGGGGTGGGGGgttctttcttc > 2:230144/1‑135 (MQ=255) ccGGCGTTACTGGCGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCCGTATC‑AAGGGCGGTGAGGCGTCCTTTGGCAATGGCGGAACAGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCa < 1:1893357/140‑1 (MQ=255) ccGGCGTTACTGGCGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCCGTATC‑AAGGGCGGTGAGGCGTCCTTTGGCAATGGCGGAACAGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCa < 1:582573/140‑1 (MQ=255) cGTTACTGGCGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCCGTATC‑AAGGGCGGTGAGGCGTCCTTTGGCAATGGCGGAACAGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCg < 1:627776/140‑1 (MQ=255) cTGGCGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCCGTATC‑AAGGGCGGTGAGGCGTCCTTTGGCAATGGCGGAACCGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGc < 2:2153940/140‑1 (MQ=255) gACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCCGTATC‑AAGGGCGGTGAGGCGTCCTTTGGCAATGGCGGAACCGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGcgtgccg < 1:2162961/140‑1 (MQ=255) cAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCCGTATC‑AAGGGCGGTGAGGCGTCCTTTGGCAATGGCGGAACCGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGcgtgccgtg > 1:1032966/1‑140 (MQ=255) cAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCCGTATC‑AAGGGCGGTGAGGCGTCCTTTGGCAATGGCGGAACCGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGcgtgccgtg > 1:269232/1‑140 (MQ=255) cAGTACGCCCGGCGCTTTTTGCGCGGCGTCCGTATC‑AAGGGCGGTGAGGCGTCCTTTGGCAATGGCGGAACCGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCgg > 1:2329629/1‑140 (MQ=255) aGTACGCCCGGCGCTTTTTGCGCGGCGTCCGTATC‑AAGGGCGGTGAGGCGTCCTTTGGCAATGGCGGAACAGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGt > 2:883916/1‑140 (MQ=255) tACGCCCGGCGCTTTTTGCGCGGCGTCCGTATC‑AAGGGCGGTGAGGCGTCCTTTGGCAATGGCGGAACCGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAg > 1:1820666/1‑140 (MQ=255) aCGCCCGGCGCTTTTTGCGCGGCGTCCGTATC‑AAGGGCGGTGAGGCGTCCTTTGGCAATGGCGGAACAGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGt > 1:735280/1‑140 (MQ=255) cGGCGCTTTTTGCGCGGCGTCCGTATC‑AAGGGCGGTGAGGCGTCCTTTGGCAATGGCGGAACCGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCa > 2:1641917/1‑140 (MQ=255) cGGCGCTTTTTGCGCGGCGTCCGTATC‑AAGGGCGGTGAGGCGTCCTTTGGCAATGGCGGAACAGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCa > 2:1481520/1‑140 (MQ=255) cGGCGCTTTTTGCGCGGCGTCCGTATC‑AAGGGCGGTGAGGCGTCCTTTGGCAATGGCGGAACAGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCa > 1:2004107/1‑140 (MQ=255) gcgcTTTTTGCGCGGCGTCCGTATC‑AAGGGCGGTGAGGCGTCCTTTGGCAATGGCGGAACCGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGc > 2:358452/1‑140 (MQ=255) gcgcTTTTTGCGCGGCGTCCGTATC‑AAGGGCGGTGAGGCGTCCTTTGGCAATGGCGGAACAGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGc > 2:1047331/1‑140 (MQ=255) gcgcTTTTTGCGCGGCGTCCGTATC‑AAGGGCGGTGAGGCGTCCTTTGGCAATGGCGGAACAGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGc > 2:47687/1‑140 (MQ=255) cgcTTTTTGCGCGGCGTCCGTATC‑AAGGGCGGTGAGGCGTCCTTTGGCAATGGCGGAACCGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCg > 1:2221023/1‑140 (MQ=255) gcTTTTTGCGCGGCGTCCGTATC‑AAGGGCGGTGAGGCGTCCTTTGGCAATGGCGGAACCGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCgg < 2:1341922/140‑1 (MQ=255) gcTTTTTGCGCGGCGTCCGTATC‑AAGGGCGGTGAGGCGTCCTTTGGCAATGGCGGAACCGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCgg > 1:1584984/1‑140 (MQ=255) ttGCGCGGCGTCCGTATC‑AAGGGCGGTGAGGCGTCCTTTGGCAATGGCGGAACCGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCGGTCCGt < 1:814267/140‑1 (MQ=255) cggcgTCCGTATC‑AAGGGCGGTGAGGCGTCCTTTGGCAATGGCGGAACCGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCGGTCCGTCGATg < 1:1385813/140‑1 (MQ=255) cggcgTCCGTATC‑AAGGGCGGTGAGGCGTCCTTTGGCAATGGCGGAACCGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCGGTCCGTCGATg < 1:1211065/140‑1 (MQ=255) cggcgTCCGTATC‑AAGGGCGGTGAGGCGTCCTTTGGCAATGGCGGAACAGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCGGTCCGTCGATg < 2:2004107/140‑1 (MQ=255) cggcgTCCGTATC‑AAGGGCGGTGAGGCGTCCTTTGGCAATGGCGGAACAGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCGGTCCGTCGATg < 2:1225374/140‑1 (MQ=255) cggcgTCCGTATC‑AAGGGCGGTGAGGCGTCCTTTGGCAATGGCGGAACAGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCGGTCCGTCGATg < 2:2180593/140‑1 (MQ=255) tCCGTATC‑AAGGGCGGTGAGGCGTCCTTTGGCAATGGCGGAACCGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCGGTCCGTCGATGCGGTc < 2:1804591/140‑1 (MQ=255) tCCGTATC‑AAGGGCGGTGAGGCGTCCTTTGGCAATGGCGGAACAGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCGGTCCGTCGATGCGGTc < 1:47687/140‑1 (MQ=255) c‑AAGGGCGGTGAGGCGTCCTTTGGCAATGGCGGAACAGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCGGTCCGTCGATGCGGTCATGGGga < 1:1923086/140‑1 (MQ=255) c‑AAGGGCGGTGAGGCGTCCTTTGGCAATGGCGGAACAGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCGGTCCGTCGATGCGGTCATGGGga < 1:291033/140‑1 (MQ=255) aaGGGCGGTGAGGCGTCCTTTGGCAATGGCGGAACCGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCGGTCCGTCGATGCGGTCATGGGgac > 2:1751131/1‑140 (MQ=255) aaGGGCGGTGAGGCGTCCTTTGGCAATGGCGGAACCGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCGGTCCGTCGATGCGGTCATGGGgac > 2:2056264/1‑140 (MQ=255) aaGGGCGGTGAGGCGTCCTTTGGCAATGGCGGAACAGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCGGTCCGTCGATGCGGTCATGGGgac < 1:393022/140‑1 (MQ=255) gggCGGTGAGGCGTCCTTTGGCAATGGCGGAACCGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCGGTCCGTCGATGCGGTCATGGGgacga > 1:1325630/1‑140 (MQ=255) gggCGGTGAGGCGTCCTTTGGCAATGGCGGAACCGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCGGTCCGTCGATGCGGTCATGGGgacga > 2:1516610/1‑140 (MQ=255) gggCGGTGAGGCGTCCTTTGGCAATGGCGGAACAGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCGGTCCGTCGATGCGGTCATGGGgacga > 1:1618106/1‑140 (MQ=255) ggCGGTGAGGCGTCCTTTGGCAATGGCGGAACAGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCGGTCCGTCGATGCGGTCATGGGgacgac > 2:1954136/1‑140 (MQ=255) ggCGGTGAGGCGTCCTTTGGCAATGGCGGAACAGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCGGTCCGTCGATGCGGTCATGGGgacgac > 1:381494/1‑140 (MQ=255) ggTGAGGCGTCCTTTGGCAATGGCGGAACCGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCGGTCCGTCGATGCGGTCATGGGGAcgaccga < 1:1912898/140‑1 (MQ=255) ggTGAGGCGTCCTTTGGCAATGGCGGAACCGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCGGTCCGTCGATGCGGTCATGGGGAcgaccga < 1:461026/140‑1 (MQ=255) ggTGAGGCGTCCTTTGGCAATGGCGGAACCGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCGGTCCGTCGATGCGGTCATGGGGAcgaccga > 2:1699115/1‑140 (MQ=255) ggTGAGGCGTCCTTTGGCAATGGCGGAACCGACGATATAGCCATAGGCGGCGCTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCTGGTAGTTTTCAGCGGGCCGTCGATGCGGTCCTGGGGAcgaccga > 2:102705/1‑140 (MQ=255) ggTGAGGCGTCCTTTGGCAATGGCGGAACAGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCGGTCCGTCGATGCGGTCATGGGGAcgaccga < 1:1366713/140‑1 (MQ=255) ggTGAGGCGTCCTTTGGCAATGGCGGAACAGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCGGTCCGTCGATGCGGTCATGGGGAcgaccga > 2:1797797/1‑140 (MQ=255) ggTGAGGCGTCCTTTGGCAATGGCGGAACAGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCGGTCCGTCGATGCGGTCATGGGGAcgaccga < 2:1607667/140‑1 (MQ=255) gTGAGGCGTCCTTTGGCAATGGCGGAACCGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCGGTCCGTCGATGCGGTCATGGGGAcgaccgac < 2:2329629/140‑1 (MQ=255) gTGAGGCGTCCTTTGGCAATGGCGGAACCGACGATATAGCAATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCGGTCCGTCGATGCGGTCATGGGGAcgaccgac > 1:2410785/1‑140 (MQ=255) tGAGGCGTCCTTTGGCAATGGCGGAACCGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCGGTCCGTCGATGCGGTCATGGGGACGACCGACa < 2:1596815/140‑1 (MQ=255) tGAGGCGTCCTTTGGCAATGGCGGAACAGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCGGTCCGTCGATGCGGTCATGGGGACGACCGACa > 2:1902561/1‑140 (MQ=255) tGAGGCGTCCTTTGGCAATGGCGGAACAGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCGGTCCGTCGATGCGGTCATGGGGACGACCGACa > 1:250912/1‑140 (MQ=255) cGTCCTTTGGCAATGGCGGAACCGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCGGTCCGTCGATGCGGTCATGGGGACGACCGACAACCtt < 2:1325630/140‑1 (MQ=255) cGTCCTTTGGCAATGGCGGAACCGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCGGTCCGTCGATGCGGTCATGGGGACGACCGACAACCtt > 2:2085919/1‑140 (MQ=255) cGTCCTTTGGCAATGGCGGAACAGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCGGTCCGTCGATGCGGTCATGGGgacg > 1:1343805/1‑128 (MQ=255) cGTCCTTTGGCAATGGCGGAACAGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCGGTCCGTCGATGCGGTCATGGGgacg < 2:1343805/128‑1 (MQ=255) cGTCCTTTGGCAATGGCGGAACAGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCGGTCCGTCGATGCGGTCATGGGGACGACCGACAACCtt > 1:980461/1‑140 (MQ=255) cGTCCTTTGGCAATGGCGGAACAGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCGGTCCGTCGATGCGGTCATGGGGACGACCGACAACCtt > 1:542099/1‑140 (MQ=255) tCCTTTGGCAATGGCGGAACCGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCGGTCCGTCGATGCGGTCATGGGGACGACCGACAACCTTCa < 2:2073998/140‑1 (MQ=255) tCCTTTGGCAATGGCGGAACAGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCGGTCCGTCGATGCGGTCATGGGGACGACCGACAACCTTCa > 1:412809/1‑140 (MQ=255) gCAATGGCGGAACAGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCGGTCCGTCGATGCGGTCATGGGGACGACCGACAACCTTCAGCTgatc > 1:1073414/1‑140 (MQ=255) aTGGCGGAACAGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCGGTCCGTCGATGCGGTCATGGGGACGACCGACAACCTTCAGCTgatcgat < 1:1226666/140‑1 (MQ=255) aTGGCGGAACAGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCGGTCCGTCGATGCGGTCATGGGGACGACCGACAACCTTCAGCTgatcgat < 1:37842/140‑1 (MQ=255) tGGCGGAACCGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCGGTCCGTCGATGCGGTCATGGGGACGACCGACAACCTTCAGCTgatcgatc > 2:2079892/1‑140 (MQ=255) tGGCGGAACCGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCGGTCCGTCGATGCGGTCATGGGGACGACCGACAACCTTCAGCTgatcgatc < 1:886320/140‑1 (MQ=255) tGGCGGAACCGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCGGTCCGTCGATGCGGTCATGGGGACGACCGACAACCTTCAGCTgatcgatc < 1:2081833/140‑1 (MQ=255) tGGCGGAACCGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCGGTCCGTCGATGCGGTCATGGGGACGACCGACAACCTTCAGCTgatcgatc < 1:159707/140‑1 (MQ=255) tGGCGGAACAGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCGGTCCGTCGATGCGGTCATGGGGACGACCGACAACCTTCAGCTgatcgatc < 2:1923054/140‑1 (MQ=255) tGGCGGAACAGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCGGTCCGTCGATGCGGTCATGGGGACGACCGACAACCTTCAGCTgatcgatc < 1:419027/140‑1 (MQ=255) tGGCGGAACAGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCGGTCCGTCGATGCGGTCATGGGGACGACCGACAACCTTCAGCTgatcgatc > 1:198224/1‑140 (MQ=255) ggCGGAACCGACGATATAGCCATAGGCGGCGTT‑GGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCGGTCCGTCGATGCGGTCATGGGGACGACCGACAACCTTCAGCTGATCGATCgg > 1:1638027/1‑140 (MQ=255) ggCGGAACAGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCGGTCCGTCGATGCGGTCATGGGGACGACCGACAACCTTCAGCTGatcgatcg > 1:142831/1‑140 (MQ=255) gAACCGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCGGTCCGTCGATGCGGTCATGGGGACGACCGACAACCTTCAGCTGATCGATCGGGtt > 1:984504/1‑140 (MQ=255) | CTAACAGCCTGGCGGTGTTTTTGTCGCCTTTGCCGAGTGCCCCGGCGTTACTGGCGGTAATGACAGCCAGTACGCCCGGCGCTTTTTGCGCGGCGTCCGTATC‑AAGGGCGGTGAGGCGTCCTTTGGCAATGGCGGAACCGACGATATAGCCATAGGCGGCGTTGGGGGCTTCTTCATGCCATTCGTAGGCGTAGCGTGCCGTGCCGGTAGTTTTCAGCGGTCCGTCGATGCGGTCATGGGGACGACCGACAACCTTCAGCTGATCGATCGGGTT > NC_000913/300634‑300907 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |