Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 1,550,663 | 0 | A | C | 26.3% | 110.8 / 16.0 | 57 | N68T (AAC→ACC) | fdnH | formate dehydrogenase N subunit beta |
Reads supporting (aligned to +/- strand): ref base A (34/8); new base C (0/15); total (34/23) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 2.22e-08 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
GGTGCGTGATTACAAAGCAGAAGTCGCAAAACTTATCGACGTTTCCACCTGTATCGGCTGTAAAGCCTGTCAGGTGGCGTGTTCGGAGTGGAACGACATCCGTGATGAAGTGGGGCACTGCGTCGGGGTTTA‑CGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCACTGTGAAGATCCCGGCTGCCTGAAGGCGTGCCC > NC_000913/1550526‑1550798 | ggTGCGTGATTAAAAAGAAGAAGTCGCAAAACTTATCGACGTTTCCCCCTGTATCGGCTGTAAAGCCTGTCGGGTGGCGTGTTCGGAGTGGAACGACATCCGTGATGAAGGGGGGCACTGCGTGGGGGTTTA‑CGATAccc < 2:870762/140‑1 (MQ=25) tGCGTGATTACAAAGCAGAAGTCGCAAAACTTATCGACGTTTCCACCTGTATCGGCTGTAAAGCCTGTCAGGTGGCGTGTTCGGAGTGGAACGACATCCGTGATGAAGTGGGGCACTGCGTCGGGGTTTA‑CGATAAcccc > 2:1984663/1‑140 (MQ=255) cGTGATTACAAAGCAGAAGTCGCAAAACTTATCGACGTTTCCACCTGTATCGGCTGTAAAGCCTGTCAGGTGGCGTGTTCGGAGTGGAACGACATCCGTGATGAAGTGGGGCACTGCGTCGGGGTTTA‑CGATAACCccgc > 1:2166574/1‑140 (MQ=255) cGTGATTACAAAGCAGAAGTCGCAAAACTTATCGACGTTTCCACCTGTATCGGCTGTAAAGCCTGTCAGGTGGCGTGTTCGGAGTGGAACGACATCCGTGATGAAGTGGGGCACTGCGTCGGGGTTTA‑CGATAACCccgc > 2:1754776/1‑140 (MQ=255) cGTGATTACAAAGCAGAAGTCGCAAAACTTATCGACGTTTCCACCTGTATCGGCTGTAAAGCCTGTCAGGTGGCGTGTTCGGAGTGGAACGACATCCGTGATGAAGTGGGGCACTGCGTCGGGGTTTA‑CGATAACCccgc > 1:2257577/1‑140 (MQ=255) gTGATTACAAAGCAGAAGTCGCAAAACTTATCGACGTTTCCACCTGTATCGGCTGTAAAGCCTGTCAGGTGGCGTGTTCGGAGTGGAACGACATCCGTGATGAAGTGGGGCACTGCGTCGGGGTTTA‑CGATAACCccgcc > 1:538582/1‑140 (MQ=255) aGCAGAAGTCGCAAAACTTATCGACGTTTCCACCTGTATCGGCTGTAAAGCCTGTCAGGTGGCGTGTTCGGAGTGGAACGACATCCGTGATGAAGTGGGGCACTGCGTCGGGGTTTA‑CGATAACCCCGCCGATCTGAgcg > 2:1993779/1‑140 (MQ=255) gCAGAAGTCGCAAAACTTATCGACGTTTCCACCTGTATCGGCTGTAAAGCCTGTCAGGTGGCGTGTTCGGAGTGGAACGACATCCGTGATGAAGTGGGGCACTGCGTCGGGGTTTA‑CGATACCCCCGCCGATCTGAgcgc < 1:184948/140‑1 (MQ=255) cAGAAGTCGCAAAACTTATCGACTTTCCCCCCTGTATCGGCTGTAAAGCCTGTCGGGTGGCGTGTTCGGAGTGGAACGACATCCGTGATGAAGTGGGGCACTGCGTGGGGTTTTA‑CGATACCCCCGCCGATCTGAGCGcc < 2:1857995/140‑1 (MQ=25) cAGAAGTCCAAAAATTTATCGACGTTCCCACCTGTATCGGCTGTAAAGCCTGTCAGGTGGCGTGTTGGGAGGGGAACGACACCCGTGATAAAGGGGGGCACGGCGTCGGGTTTTA‑CGATACCCCCGCCGATCTGAGCGcc < 2:2163101/140‑1 (MQ=21) aaGAAGTCGCAAACCTTACCGGCTTTCCCACTTGTATCGGCTGAAAAGCCTGCCAGGTGGGTTGTTGGGAGGGGAACGACACCCGTGATGAAGTGGGGCACTGCGTGGGGGTTTA‑CAATACCCCCGCCGATCTGAGCGcc < 2:2166574/139‑1 (MQ=255) aaGAAGTCGAAAAACTTATCGACGTTTCCCCCTGTATCGGCTGTAAAGCCTGTCGGGTGGCGTGTTGGGAGTGGAACGACATCGGTGATGAAGTGGGGCACTGCGTGGGGGTTTA‑CGATACCCCCGCCGATCTGAGCGcc < 2:2257577/139‑1 (MQ=25) aaGAAGCCGAAAACCTTATCGACGTTCCCACCTGTATCGGCTGAAAAGCCTGTGGGGGGGCGTGTTCGGAGGGGACCGACATCCGTGATGAGGGGGGGCCCTGGGTGGGGTTTTA‑CAATACCCCCGCCGATCTGAGCGcc < 2:1193146/139‑1 (MQ=255) aGAAGTCGCAAAACTTATCGACGTTTCCACCTGTATCGGCTGTAAAGCCTGTCAGGTGGCGTGTTCGGAGTGGAACGACATCCGCGATGAAGTGGGGCACTGCGTCGGGGGTTA‑CGATAAACCCGCCGATCTGAGCGCCa > 2:861917/1‑140 (MQ=255) aaaGTCGAAAAATTTATCGACGTTTCCCCCTGTATCGGCTGAAAAGCCTGTCAGGGGGCGTGTTCGGAGTGGAACGACATCCGTGATGAAGTGGGGCACTGCGTCGGGTTTTA‑CGATACCCCCGCCGATCTGAGCGCCaa < 2:1306609/139‑1 (MQ=255) aTCGACGTTTCCCCTTGTATCGGCTGTAAAGCCTGTCGGGTGGCGTGTTGGGAGTGGACCGACATCCGTGATGAAGGGGGGCACTGCGTGGGGTTTTA‑CGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGAt < 2:1152329/140‑1 (MQ=37) tCGACGTTTCCCCTTGTATCGGCTGTAAAGCTTGTGAGGTGGCGTGTTGGGAGTGGAACGACATCCGTGATGAGGTGGGGCCCGGCGTGGGGGTTTA‑CGATACCCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATg < 2:486066/140‑1 (MQ=255) tCCACCTGTATCGGCTGTAAAGCCTGTCAGGTGGCGTGTTCGGAGTGGAACGACATCCGTGATGAAGTGGGGCACTGCGTCGGGGTTTA‑CGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATgcgcctgtc > 1:1130220/1‑135 (MQ=255) agacagtGTATGGGCTGAAAAGCCTGTCGGGTGACGTGTTGGGAGTGGAACGACATCCGTGAGGAGGGGGGGCACTGGGTGGGGTTTTA‑CGATACCCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAg < 2:116878/134‑1 (MQ=255) tGTAAAGCCTGTCAGGTGGCGTGTTCGGAGTGGAACGCCATCCGTGATGAAGTGGGGCACTGCGTCGGGGTTTA‑CGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACaaaa > 1:491084/1‑140 (MQ=255) tGTAAAGCCTGTCAGGTGGCGTGTTCGGAGTGGAACGACATCCGTGATGAAGTGGGGCACTGCGTCGGGGTTTA‑CGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGaa > 1:27146/1‑140 (MQ=255) tAAAGCCTGTCAGGTGGCGTGTTCGGAGTGGAACGACATCCGTGATGAAGTGGGGCACTGCGTCGGGGTTTA‑CGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACg > 1:755672/1‑140 (MQ=255) tAAAGCCTGTCAGGTGACGTGTTCGGAGTGGAACGACATCCGTGATGAAGTGGGGCACTGCGTCGGGGTTTA‑CGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAAcctgtct > 1:116878/1‑134 (MQ=255) aaaaGCTTGTGAGGGGGCGTGTTGGGAGTGGAACGACACCCGTGATGAAGGGGGGCTCTGCGTGGGGGTTTA‑CGATACCCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACg < 2:445510/139‑1 (MQ=255) gCCTGTCAGGTGGCGTGTTCGGAGTGGAACGACATCCGTGATGAAGGGGGGCACTGCGTCGGGTTTTA‑CGATACCCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCaa < 2:2197013/140‑1 (MQ=255) tGTCAGGTGGCGTGTTCGGAGTGGAACGACATCCGTGATGAAGTGGGGCACTGCGTCGGGGTTTA‑CGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCt > 1:26519/1‑140 (MQ=255) gTCAGGTGGCGTGTTCGGAGTGGAACGACATCCGTGATGAAGTGGGGCACTGCGTCGGGGTTTA‑CGATACCCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACg < 1:1699889/132‑1 (MQ=255) gTCAGGTGGCGTGTTCGGAGTGGAACGACATCCGTGATGAAGTGGGGCACTGCGTCGGGGTTTA‑CGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACg > 2:1699889/1‑132 (MQ=255) tGGCGTGTTCGGAGTGGAACGACATCCGTGATGAAGTGGGGCACTGCGTCGGGGTTTA‑CGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTgg > 2:1602383/1‑140 (MQ=255) cGTGTCCGGAGTGGAACGACATCCGTGATGAAGGGGGGCCCTGCGGGGGGTTTTA‑CAAAACCCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTg < 2:2403310/140‑1 (MQ=255) tgtTCGGAGTGGAACGACATCCGTGATGAAGTGGGGCACTGCGTCGGGGTTTA‑CGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGAt > 2:1877399/1‑140 (MQ=255) ttCGGAGTGGAACGACATCCGTGATGAAGTGGGGCACTGCGTCGGGGTTTA‑CGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATcc > 1:494642/1‑140 (MQ=255) cGGAGTGGAACGACATCCGTGATGAAGTGGGGCACTGCGTCGGGGTTTA‑CGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGt > 2:2120519/1‑140 (MQ=255) gggggAACGACTCCGGTGATGAGGTGGGGCACTGCGTCGGGTTTTC‑CGATACCCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTaaa < 1:438819/137‑1 (MQ=255) gggACCGACATCCGTAATGAAGGGGGGCACTGCGTCGGGGTTTA‑CGATACCCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGa < 1:934602/139‑1 (MQ=255) gggAACGACATCGGTGATGAGGTGGGGCACTGCGTGGGGGTTTA‑CGATACCCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGa < 2:549708/139‑1 (MQ=255) gggAACGACATCGGTGATGAGGGGGGGCCCTGCGTGGGGTTTTA‑CGATACCCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGa < 2:787523/139‑1 (MQ=255) gggAACGACATCCGTGATGAAGTGGGGCACTGCGTCGGGTTTTA‑CGATACCCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGa < 1:1918245/139‑1 (MQ=255) gggAACGACATCCGTGATGAAGTGGGGCACTGCGTCGGGGTTTA‑CGATACCCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGa < 1:1026076/139‑1 (MQ=255) gggAACGACATCCGTGATGAAGGGGGGCACTGCGTCGGGTTTTA‑CGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGa < 2:565951/139‑1 (MQ=255) gAACGACATCCGTGATGAAGTGGGGCACTGCGTCGGGGTTTA‑CGATACCCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACg < 1:1988570/140‑1 (MQ=255) gAACGACATCCGTGATGAAGTGGGGCACTGCGTCGGGGTTTA‑CGATACCCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACg < 1:35690/140‑1 (MQ=255) aCATCCGTGATGAGGGGGGGCACTGCGGGGGGGTTTA‑CGATACCCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGt < 2:1286938/140‑1 (MQ=255) ggtCCGTGAGGAAGGGGGGCCCGGCGGGGGGTTTTA‑CGATACCCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTa < 2:1850493/138‑1 (MQ=255) cATCCGTGATGAAGTGGGGCACTGCGTCGGGGTTTA‑CGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTa > 2:194164/1‑140 (MQ=255) tCCGTGATGAAGTGGGGCACTGCGTCGGGGTTTA‑CGATACCCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATg < 1:2120519/140‑1 (MQ=255) tCCGTGATAAAGGGGGGCCCGGCGGGGGGGTTTC‑CAATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATg < 2:491084/140‑1 (MQ=255) cccGTGATGAAGTGGGGCACTGCGTCGGGGTTTA‑CGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATg < 1:1357973/139‑1 (MQ=255) cccGTGATGAAGGGGGGCACTGCGTCGGGGTTTA‑CGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATg < 1:2185250/139‑1 (MQ=255) cGTGATGAAGTGGGGCACTGCGTCGGGGTTTA‑CGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCa > 2:1648294/1‑140 (MQ=255) cGTGATGAAGGGGGGCACTGCGTCGGGTTTTA‑CGATACCCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCa < 1:1714286/140‑1 (MQ=255) cGTGAAGAAGGGGGGCACTGCGTGGGGGTTTA‑CGATACCCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCa < 1:28419/140‑1 (MQ=255) atgaAGTGGGGCACTGCGTCGGGGTTTA‑CGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCACtgt > 1:2067645/1‑140 (MQ=255) tgaAGTGGGGCACTGCGTCGGGGTTTA‑CGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCACtgtg < 1:1205088/140‑1 (MQ=255) aaGTGGGGCACTGCGTCGGGGTTTA‑CGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCACTGTGaa > 1:1005066/1‑140 (MQ=255) aaGTGGGGCACTGCGTCGGGGTTTA‑CGATAACCCCGCCCATCTGATCGCCAAGTCCTGGACGGGGATGCGCTTTAGCGACCCCGCACTGAACGGCAAGCTGGAGGGGCTGATCCGTAAAGACGGCTGGATACACCGTGaa > 2:522516/1‑140 (MQ=255) aGTGGGGCACTGCGTCGGGGTTTA‑CGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCACTGTGaaa > 2:1547418/1‑139 (MQ=255) gTGGGGCACTGCGTCGGGGTTTA‑CGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCACTGTGaact > 1:1850493/1‑138 (MQ=255) gTGGGGCACTGCGTCGGGGTTTA‑CGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCACTGTGAAGa > 2:859519/1‑140 (MQ=255) tGGGGCACTGCGTCGGGGTTTA‑CGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCACTGTGAAGAt > 2:1374556/1‑140 (MQ=255) ggCACTGCGTCGGGGTTTA‑CGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCACTGTGAAGATccc > 1:822798/1‑140 (MQ=255) cACTGCGTCGGGGTTTA‑CGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCACTGTGAAGATCCCgg < 1:1993779/140‑1 (MQ=255) cACTGCGTCGGGGTTTA‑CGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCACTGTGAAGATCCCgg > 1:243863/1‑140 (MQ=255) cTGCGTCGGGGTTTA‑CGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCACTGTGAAGATCCCGGCt > 1:1780471/1‑140 (MQ=255) cGTCGGGGTTTA‑CGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCACTGTGAAGATCCCGGCTGcc > 2:49567/1‑140 (MQ=255) cGTCGGGGTTTA‑CGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCACTGTGAAGATCCCGGCTGcc > 1:1159771/1‑140 (MQ=255) tCGGGGTTTA‑CGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCACTGTGAAGATCCCGGCTGCCTg > 2:1724743/1‑140 (MQ=255) ggggggTTTACCGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCACTGTGAAGATCCCGGCTGCCt < 2:243863/138‑1 (MQ=255) gggggTTTA‑CGATACCCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCACTGTGAAGATCCCGGCTGCCTGa < 2:722387/139‑1 (MQ=255) cGGGGTTTA‑CGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCACTGTGAAGATCCCGGCTGCCTGa > 1:387018/1‑140 (MQ=255) tttA‑CGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCACTGTGAAGATCCCGGCTGCCTGAAGGCg < 1:1648294/140‑1 (MQ=255) tttA‑CGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCACTGTGAAGATCCCGGCTGCCTGAAGGCg > 2:1114759/1‑140 (MQ=255) gATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCACTGTGAAGATCCCGGCTGCCTGAAGGCGTGccc < 1:1114759/140‑1 (MQ=255) aaTACCCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCACTGTGAAGATCCCGGCTGCCTGAAGGCGTGccc < 1:562780/139‑1 (MQ=255) tAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCACTGTGAAGATCCCGGCTGCCTg > 2:931126/1‑127 (MQ=255) tAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCACTGTGAAGATCCCGGCTGCCTg < 1:931126/127‑1 (MQ=255) | GGTGCGTGATTACAAAGCAGAAGTCGCAAAACTTATCGACGTTTCCACCTGTATCGGCTGTAAAGCCTGTCAGGTGGCGTGTTCGGAGTGGAACGACATCCGTGATGAAGTGGGGCACTGCGTCGGGGTTTA‑CGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCACTGTGAAGATCCCGGCTGCCTGAAGGCGTGCCC > NC_000913/1550526‑1550798 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |