Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	753,125	0	T	A	23.1%	194.0 / 28.6	78	intergenic (‑330/+60)	ybgD/gltA	putative fimbrial protein YbgD/citrate synthase
Reads supporting (aligned to +/- strand):  ref base T (55/5);  new base A (0/18);  total (55/23)
Fisher's exact test for biased strand distribution p-value = 1.58e-13
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

TTATAAATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACA‑‑‑ACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGT  >  NC_000913/752989‑753264                                                                                                                                         |                                                                                                                                               ttATAAATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATaaa                                                                                                                                             >  1:1370110/1‑140 (MQ=255)  tataAATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATaaaa                                                                                                                                            >  1:34710/1‑140 (MQ=255)  tataAATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATaaaa                                                                                                                                            >  1:1374679/1‑140 (MQ=255)   ataAATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATaaaaa                                                                                                                                           >  2:1152146/1‑140 (MQ=255)    taAATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAAt                                                                                                                                          >  1:95758/1‑140 (MQ=255)         gCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAAcc                                                                                                                                     >  2:1019576/1‑140 (MQ=255)         gCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAAcc                                                                                                                                     >  2:978089/1‑140 (MQ=255)         gCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAAcc                                                                                                                                     >  2:325936/1‑140 (MQ=255)         gCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAAcc                                                                                                                                     >  2:1296719/1‑140 (MQ=255)         gCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAAcc                                                                                                                                     >  2:1280007/1‑140 (MQ=255)          cGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAAccc                                                                                                                                    >  1:1216511/1‑140 (MQ=255)          cGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAAccc                                                                                                                                    >  1:92986/1‑140 (MQ=255)          cGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAAccc                                                                                                                                    >  1:1268608/1‑140 (MQ=255)          cGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAAccc                                                                                                                                    >  2:964770/1‑140 (MQ=255)          cGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAAccc                                                                                                                                    >  2:481696/1‑140 (MQ=255)           gACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCg                                                                                                                                   >  2:859098/1‑140 (MQ=255)           gACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCg                                                                                                                                   >  2:745847/1‑140 (MQ=255)           gACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCg                                                                                                                                   >  2:1187969/1‑140 (MQ=255)           gACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCg                                                                                                                                   >  2:127723/1‑140 (MQ=255)                   tGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGa                                                                                                                           >  1:264894/1‑140 (MQ=255)                            tcaattaaaGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGt                                                                                                                  >  1:1125705/7‑140 (MQ=255)                            tAATTAAAAGTTTTGGGTTGCTAATATTTTGAGTTTTTTTTTTTTTTTTAAATATTTATATAGGTTTTTTAATGGTTTTTTTTTTTACATTTTTTTGTTTTTAGGCATAAAAAAATCACCCCGCCATATGAACGGCGGGt                                                                                                                  <  2:1370110/140‑1 (MQ=255)                                     tttttGGTTTGCTGATAATTTGAGTTTTTTTTTTTTTTTTAAATATTTATATAGGTTTTTTAATGGTTTTTATTTTTAAATTTTTTTGTTTTTAGGAATAAAAAAACCACCCCGCCATATGAACGGCGGGTTAAAATAtt                                                                                                         <  2:703590/137‑1 (MQ=255)                                       tttGGGTTGCTGATAATTTGAGTTGTTTTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGTTTTTATTTTTACATTTTTTTGTGTTTAGGCATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTa                                                                                                       <  1:233145/139‑1 (MQ=255)                                         tGGTTTGCTGATATTTTGATCTTTTTTTTTTTTTTAAAATTTCTATATAGGTCTTTTAATGTTTTTTTTTTTTAAATTTTTTTGTTTTTAGGCATAAAAAAAACACCCCGCCATATGAACGGCGGGTTAAAATATTTACa                                                                                                     <  2:1374679/140‑1 (MQ=255)                                           ggTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACA‑‑‑Ac                                                                                                >  1:289179/1‑140 (MQ=255)                                                cTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACA‑‑‑ACTTAGc                                                                                           >  1:788680/1‑140 (MQ=255)                                                cTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACA‑‑‑ACTTAGc                                                                                           >  2:126691/1‑140 (MQ=255)                                                cTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACA‑‑‑ACTTAGc                                                                                           >  2:1199161/1‑140 (MQ=255)                                                   aTAATTTGAGTTTTTCTTTTTTTTTAAAATATCTATTTAGGTTTTTTAATGTTTTTTATTTTTAAATTTTTTTTTTTTTAGGAATAAAAAAATCACCCCGCCATATGAACGGCGGGTTAAAATATTTACA‑‑‑ACTTAGCAAt                                                                                        <  2:1324981/140‑1 (MQ=255)                                                          gattttttCTATTCTTTTAAAATATCTATATGGGTCTGTTAATGGATTTTATTTTTAAATTTTTTTGTGTTTAGGAATATAAAAAACACCCCGCCATATGAACGGCGGGTTAAAATATTTACA‑‑‑ACTTAGCAATCAACCAt                                                                                 <  1:374676/134‑1 (MQ=255)                                                           aGCTGTTCTATTCTTTTTAAATATCTATATAGGTTTTTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACA‑‑‑ACTTAGCAATCAACCAtt                                                                                <  1:496342/140‑1 (MQ=255)                                                            gCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACA‑‑‑ACTTAGCAATCAACCATTa                                                                               <  2:179981/140‑1 (MQ=255)                                                             cTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACA‑‑‑ACTTAGCAATCAACCATTaa                                                                              >  1:129450/1‑140 (MQ=255)                                                                ttCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACA‑‑‑ACTTAGCAATCAACCATTAACGc                                                                           >  1:42130/1‑140 (MQ=255)                                                                       tttttaAAATATTTTTAAAGGTTTTTAAATGGATTTTTTTTTTATATTTTTTTTTGTTTAGGAATAAAAAATTCAACCCGCCATATGAACGGCGGGTTAAAATATTTACA‑‑‑ACTTAGCAATCAACCATTAACGCTTGatat                                                                    <  2:1396706/139‑1 (MQ=255)                                                                          tttAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACA‑‑‑ACTTAGCAATCAACCATTAACGCTTGATATCGc                                                                 >  1:1287821/1‑140 (MQ=255)                                                                          tttAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACA‑‑‑ACTTAGCAATCAACCATTAACGCTTGATATCGc                                                                 >  2:1040627/1‑140 (MQ=255)                                                                          tttAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGGTAAAATATTTACA‑‑‑ACTTAGCAAACAACCATTAACGCATGATATTGc                                                                 >  1:15209/1‑140 (MQ=255)                                                                                  tCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTTCA‑‑‑ACTTAGCAAACAACCATTAACGCTTGATATCGCTTTTAAAg                                                         >  1:279966/1‑140 (MQ=255)                                                                                    tatataGGTTTTTAAATGGTTTTTATTTTTAAATTTTTTTGTTTTTAGGAATAAAAAAATCACCCCGCCATATGAACGGCGGGTTAAAATATTTACA‑‑‑ACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTc                                                       <  2:34710/140‑1 (MQ=255)                                                                                           gTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGt                                                   >  1:527678/1‑140 (MQ=255)                                                                                           gTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACA‑‑‑ACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGtttt                                                >  2:1231330/1‑140 (MQ=255)                                                                                           gTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACA‑‑‑ACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGtttt                                                >  1:1185390/1‑140 (MQ=255)                                                                                           gTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACA‑‑‑ACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGtttt                                                >  1:239940/1‑140 (MQ=255)                                                                                           gTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACA‑‑‑ACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGtttt                                                >  1:753400/1‑140 (MQ=255)                                                                                           gTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACA‑‑‑ACTTAGCAATCAACCATTAACGCTTGATATCCCTTTTAAAGTCGCGtttt                                                >  1:1222982/1‑140 (MQ=255)                                                                                             tttttAATGGTTTTTTTTTTTACATTTTTTTGTTTTTAGGCATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACA‑‑‑ACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTc                                              <  1:127723/137‑1 (MQ=255)                                                                                             cTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACA‑‑‑ACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGtttttt                                              >  1:773893/1‑139 (MQ=255)                                                                                              tGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACA‑‑‑ACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCa                                             >  1:1403587/1‑140 (MQ=255)                                                                                              tGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACA‑‑‑ACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCa                                             >  1:404775/1‑140 (MQ=255)                                                                                              tGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACA‑‑‑ACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCa                                             >  1:594991/1‑140 (MQ=255)                                                                                              tGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACA‑‑‑ACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCa                                             >  1:1415529/1‑140 (MQ=255)                                                                                              tGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACA‑‑‑ACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCa                                             >  2:1264967/1‑140 (MQ=255)                                                                                              tGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACA‑‑‑ACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGGCGCGtttttta                                             >  1:637013/1‑138 (MQ=255)                                                                                              tGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACA‑‑‑ACTTAGCAATCAACCATTAACCCTTGATATCGCTTTTAAAGTCGCGGTTTTCa                                             >  1:1094527/1‑140 (MQ=255)                                                                                              tGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACA‑‑‑ACTTAGCAATCAACCATTAAAGCTTGATATCGCTTTTAAAATCGCGTTTTTCa                                             >  2:826095/1‑140 (MQ=255)                                                                                               tttAATGTTTTTTTTTTTTAAATTTTTTTTTGTTTAGGAAAAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACA‑‑‑ACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCat                                            <  2:958887/139‑1 (MQ=255)                                                                                               tttAATGTATTTTTTTTTTAAATTTTTTTGTGTTTAGGAAAAAAAAAATCACCCCGCCATATGAACGGCGGGTTAAAATATTTACA‑‑‑ACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCat                                            <  2:1125705/139‑1 (MQ=255)                                                                                               tttAATGTATTTTATTTTTACAATTTTTTGTTTTAAGCCATATAAAAAACAACCCGCCATATGAACGGCGGGTTAAAATATTTACA‑‑‑ACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCat                                            <  2:81721/139‑1 (MQ=255)                                                                                               tttAATGGATTTTATTTTTACAATTTTTTGTTTTTAGGAATAAAAAAACCAACCCGCCATATGAACGGCGGGTTAAAATATTTACA‑‑‑ACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCat                                            <  1:745847/139‑1 (MQ=255)                                                                                               tttAAGGGTTTTTATTTTTCCAATTTTTTGTTTTTAGGCATAAAAAAATCACCCCGCCATATGAACGGCGGGTTAAAATATTTACA‑‑‑ACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCat                                            <  2:203457/139‑1 (MQ=255)                                                                                               ttaaaTGGTTTTTTTTTTTACATTTTTTTGTGTTTAGGAATAAAAAAATCACCCCGCCATATGAACGGCGGGTTAAAATATTTACA‑‑‑ACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCat                                            <  2:289179/137‑1 (MQ=255)                                                                                                ttAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACA‑‑‑ACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCata                                           >  1:355450/1‑140 (MQ=255)                                                                                                ttAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACA‑‑‑ACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCata                                           >  2:1118097/1‑140 (MQ=255)                                                                                                ttAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACA‑‑‑ACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCata                                           >  2:535649/1‑140 (MQ=255)                                                                                                ttAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACA‑‑‑ACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCata                                           >  1:1458875/1‑140 (MQ=255)                                                                                                ttAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACA‑‑‑ACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCata                                           >  1:312164/1‑140 (MQ=255)                                                                                                ttAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACA‑‑‑ACTTAGCAATCAACCATTAAAGCTTGATATCGCTTTTAAAGTCGCGTTTTTCata                                           >  2:1205650/1‑140 (MQ=255)                                                                                                  aatgttttttttttttAAATTTTTTTGTTTTTAGGAATAAAAAAACCACCCCGCCATATGAACGGCGGGTTAAAATATTTACA‑‑‑ACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATc                                         <  2:753400/134‑1 (MQ=255)                                                                                                  aaTGGTTTTTATTTTTACAATTTTTTGTTTTTAGGCATAAAAAAATCACCCCGCCATATGAACGGCGGGTTAAAATATTTACA‑‑‑ACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATc                                         <  1:808623/140‑1 (MQ=255)                                                                                                  aaTGGATTTTATTTTTAAAATTTTTTGTTTTTAGGCATATAAAAATCACCCCGCCATATGAACGGCGGGTTAAAATATTTACA‑‑‑ACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATc                                         <  1:325936/140‑1 (MQ=255)                                                                                                     ggtttttattttTACATTTTTTTGTGTTTAGGAATAAAAAAATCACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATc                                         <  2:527678/137‑1 (MQ=255)                                                                                                     ggATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACA‑‑‑ACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTg                                      >  1:1084298/1‑140 (MQ=255)                                                                                                     ggATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAAAATTTACA‑‑‑AATTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTg                                      >  2:610351/1‑140 (MQ=255)                                                                                                       tttttttttttAAATTTTTTTGTTTTTAGGCATAAAAAAATCACCCCGCCATATGAACGGCGGGTTAAAATATTTACA‑‑‑ACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGta                                    <  2:1179624/139‑1 (MQ=255)                                                                                                          ttattttTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACA‑‑‑ACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATAc                                 >  2:176337/1‑140 (MQ=255)                                                                                                                  aCAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACA‑‑‑ACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGAcg                         <  1:1019576/140‑1 (MQ=255)                                                                                                                     tttttttGTGTTTAGGAAAAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACA‑‑‑ACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCgg                      <  2:129450/139‑1 (MQ=255)                                                                                                                           tgttTTTAGGAATAAAAAAACCAACCCGCCATATGAACGGCGGGTTAAAATATTTACA‑‑‑ACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGc                <  2:312164/140‑1 (MQ=255)                                                                                                                           tgttTTTAGCAATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACA‑‑‑ACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGc                <  2:239940/140‑1 (MQ=255)                                                                                                                           tgtgTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACA‑‑‑ACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGc                <  1:126691/140‑1 (MQ=255)                                                                                                                           tgtgTTTAGGCATAAAAAAAACAACCCGCCATATGAACGGCGGGTTAAAATATTTACA‑‑‑ACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGc                <  2:95758/140‑1 (MQ=255)                                                                                                                           tgtgTTTAGGAATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACA‑‑‑ACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGc                <  2:92986/140‑1 (MQ=255)                                                                                                                            gtttttAGGAATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACA‑‑‑ACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCa               <  1:681643/137‑1 (MQ=255)                                                                                                                                   ggaataaAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACA‑‑‑ACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCa        <  1:1448692/137‑1 (MQ=255)                                                                                                                                      ataaAAAAATCACCCCGCCATATGAACGGCGGGTTAAAATATTTACA‑‑‑ACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATAc     <  1:1152146/140‑1 (MQ=255)                                                                                                                                         taAAAATCAACCCGCCATATGAACGGCGGGGTAAAATATTTTCA‑‑‑ACTTAGCAATCAACCATTAAAGCTTGATATCGCTTTTTAAGTCGCGGTTTTCATATCCCGTATACAGCTGAAGCGGACCGGCAATCTTCATAccct  >  2:1086708/1‑138 (MQ=255)                                                                                                                                         |                                                                                                                                               TTATAAATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGGCATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACA‑‑‑ACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCAATCTTCATACCGT  >  NC_000913/752989‑753264

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑