Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	600,880	Δ43 bp	coding (2167‑2209/3144 nt)	cusA →	copper/silver export system RND permease

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	600880	600922	43	83 [0]	[0] 77	cusA	copper/silver export system RND permease

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 600879	0 (0.000)	77 (0.900)	49/276	0.4	100%	coding (2166/3144 nt)	cusA	copper/silver export system RND permease
	?	NC_000913	600923 =	0 (0.000)					coding (2210/3144 nt)	cusA	copper/silver export system RND permease

GCGGATATCGACGCGATGGCTGAGCAAATTGAAGAAGTAGCGCGAACGGTGCCAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCAACGTTGAGATTAACCGTGAAAAAGCCGCACGTTACGGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACT  >  NC_000913/600784‑601061                                                                                                                                            |                                                                                                                                           cattaaaagccccatcggcattaaagtttccggcactgtgctggcggatatcgacgcgatggctgagcaaattgaagaagtagcgcgaacggtgccaggcgtagcttctgcgcttgccgagcggctggaaggtgggcgcg                                                                                                                                            >  2:33283‑M2/140‑140 (MQ=255) cattaaaagccccatcggcattaaagtttccggcactgtgctggcggatatcgacgcgatggctgagcaaattgaagaagtagcgcgaacggtgccaggcgtagcttctgcgcttgccgagcggctggaaggtgggcgcg                                                                                                                                            <  1:1410865‑M2/1‑1 (MQ=255)    taaaagccccatcggcattaaagtttccggcactgtgctggcggatatcgacgcgatggctgagcaaattggagaagtagcgcgaacggtgccaggcgtagcttctgcgcttgccgagcggctggaaggtgggcgcGTAt                                                                                                                                         <  1:987395‑M2/4‑1 (MQ=255)     aaaagccccatcggcattaaagtttccggcactgtgctggcggatatcgacgcgatggctgagcaaattgaagaagtagcgcgaacggtgccaggcgtagcttctgcgcttgccgagcggctggaaggtgggcgcGTATg                                                                                                                                        <  1:360127‑M2/5‑1 (MQ=255)             catcggcattaaagtttccggcactgtgctggcggatatcgacgcgatggctgagcaaattgaagaagtagcgcgaacggtgccaggcgtagcttctgcgcttgccgagcggctggaaggtgggcgcGTATGACGGTGGc                                                                                                                                <  1:205776‑M2/13‑1 (MQ=255)             catcggcattaaagtttccggcactgtgctggcggatatcgacgcgatggctgagcaaattgaagaagtagcgcgaacggagccaggcgtagcttctgcgcttgccgagcggctggaaggtgggggcGTATGACGGGGGc                                                                                                                                >  1:227515‑M2/128‑140 (MQ=255)             catcgacattaaagtttccggcactgtgctggcggatatcgacgcgatggctgagcaaattgaagaagtagcgcgaacggtgccaggcgtagcttctgcgcttgccgagcggctggaaggtgggcgcGTATGACGGTGGc                                                                                                                                <  2:444555‑M2/13‑1 (MQ=255)              atcggcattaaagtttccggcactgtgctggcggatatcgacgcgatggctgagcaaattgaagaagtagcgcgaacggtgccaggcgtagcttctgcgcttgccgagcggctggaaggtgggcgcGTATGACGGTGGCg                                                                                                                               >  1:6703‑M2/127‑140 (MQ=255)                 ggcattaaagtttccggcactgtgctggcggatatcgacgcgatggctgagcaaattgaagaagtagcgcgaacggtgccaggcgtagcttctgcgcttgccgagcggctggaaggtgggcgcGTATGACGGTGGCGGAt                                                                                                                            <  2:618446‑M2/17‑1 (MQ=255)                     ttaaagtttccggcactgtgctggcggatatcgacgcgatggctgagcaaattgaagaagtagcgcgaacggtgccaggcgtagcttctgcgcttgccgagcggctggaaggttggcgcGTATGACGGTGGCGGATGTGc                                                                                                                        <  2:872073‑M2/21‑1 (MQ=255)                     ttaaagtttccggcactgtgctggcggatatcgacgcgatggctgagcaaattgaagaagtagcgcgaacggtgccaggcgtagcttctgcgcttgccgagcggctggaaggtgggcgcGTATGACGGTGGCGGATGTGc                                                                                                                        <  2:336787‑M2/21‑1 (MQ=255)                       aaagtttccggcactgtgctggcggatatcgacgcgatggctgagcaaattgaagaagtagcgcgaacggtgccaggcgtagcttctgcgcttgccgagcggctggaaggtgggcgcGTATGACGGTGGCGGATGTGCAg                                                                                                                      <  2:1431028‑M2/23‑1 (MQ=255)                          gtttccggcactgtgctggcggatatcgacgcgatggctgagcaaattgaagaagtagcgcgaacggtgccaggcgtagcttctgcgcttgccgagcggctggaaggtgggcgcGTATGACGGTGGCGGATGTGCAgttg                                                                                                                   <  1:95848‑M2/26‑1 (MQ=255)                               cggcactgtgctggcggatatcgacgcgatggctgagcaaattgaagaagtagcgcgaacggtgccaggcgtagcttctgcgcttgccgagcggctggaaggtgggcgcGTATGACGGTGGCGGATGTGCAGttgtttgt                                                                                                              <  2:1318391‑M2/31‑1 (MQ=255)                               cggcactgtgctggcggatatcgacgcgatggctgagcaaattgaagaagtagcgcgaacggtgccaggcgtagcttctgcgcttgccgagcggctggaaggtgggcgcGTATGACGGTGGCGGATGTGCAGttgtttgt                                                                                                              <  1:668823‑M2/31‑1 (MQ=255)                               cggcactgtgctggcggatatcgacgcgatggctgagcaaattgaagaagtagcgcgaacggtgccaggcgtagcttctgcgcttgccgagcggctggaaggtgggcgcGTATGACGGTGGCGGATGTGCAGttgtttgt                                                                                                              <  1:1306806‑M2/31‑1 (MQ=255)                                    ctgtgctggcggatatcgacgcgatggctgagcaaattgaagaagtagcgcgaacggtgccaggcgtagcttctgcgcttgccgagcggctggaaggtgggcgcGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACtt                                                                                                         <  1:330339‑M2/36‑1 (MQ=255)                                       tgctggcggatatcgacgcgatggctgagcaaattgaagaagtagcgcgaacggtgccaggcgtagcttctgcgcttgccgagcggctggaaggtgggcgcGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTg                                                                                                      >  1:419175‑M2/102‑140 (MQ=255)                                       tgctggcggatatcgacgcgatggctgagcaaattgaagaagtagcgcgaacggtgccaggcgtagcttctgcgcttgccgagcggctggaaggtgggcgcGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTg                                                                                                      >  1:948486‑M2/102‑140 (MQ=255)                                       tgctggcggatatcgacgcgatggctgagcaaattgaagaagtagcgcgaacggtgccaggcgtagcttctgcgcttgccgagcggctggaaggtgggcgcGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTg                                                                                                      >  2:804706‑M2/102‑140 (MQ=255)                                         ctggcggatatcgacgcgatggctgagcaaattgaagaagtagcgcgaacggtgccaggcgtagcttctgcgcttgccgagcggctggaaggtgggcgcGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCg                                                                                                    <  1:64769‑M2/41‑1 (MQ=255)                                              ggatatcgacgcgatggctgagcaaattgaagaagtagcgcgaacggtgccaggcgtagcttctgcgcttgccgagcggctggaaggtgggcgcGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTggg                                                                                               <  1:1420936‑M2/46‑1 (MQ=255)                                              ggatatcgacgcgatggctgagcaaattgaagaagtagcgcgaacggtgccaggcgtagcttctgcgcttgccgagcggctggaaggtgggcgcGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTggg                                                                                               <  2:687275‑M2/46‑1 (MQ=255)                                              ggatatcgacgcgatggctgagcaaattgaagaagtagcgcgaacggtgccaggcgtagcttctgcgcttgccgagcggctggaaggtgggcgcGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTggg                                                                                               <  2:174153‑M2/46‑1 (MQ=255)                                              ggatatcgacgcgatggctgagcaaattgaagaagtagcgcgaacggtgccaggcgtagcttctgcgcttgccgagcggctggaaggtgggcgcGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTggg                                                                                               <  1:950431‑M2/46‑1 (MQ=255)                                                 tatcgacgcgatggctgagcaaattgaagaagtagcgcgaacggtgccaggcgtagcttctgcgcttgccgagcggctggaaggtgggcgcGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTgggcgg                                                                                            >  1:655291‑M2/92‑140 (MQ=255)                                                 tatcgacgcgatggctgagcaaattgaagaagtagcgcgaacggtgccaggcgtagcttctgcgcttgccgagcggctggaaggtgggcgcGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTgggcgg                                                                                            >  1:673920‑M2/92‑140 (MQ=255)                                                 tatcgacgcgatggctgagcaaattgaagaagtagcgcgaacggtgccaggcgtagcttctgcgcttgccgagcggctggaaggtgggcgcGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTgggcgg                                                                                            >  1:883421‑M2/92‑140 (MQ=255)                                                 tatcgacgcgatggctgagcaaattgaagaagtagcgcgaacggtgccaggcgtagcttctgcgcttgccgagcggctggaaggtgggcgcGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTggg                                                                                               >  1:1054086‑M2/92‑137 (MQ=255)                                                 tatcgacgcgatggctgagcaaattgaagaagtagcgcgaacggtgccaggcgtagcttctgcgcttgccgagcggctggaaggtgggcgcGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTggg                                                                                               <  2:1054086‑M2/46‑1 (MQ=255)                                                 tatcgacgcgatggctgagcaaattgaagaagtagcgcgaacggtgccagacgtagcttctgcgcttgccgagcggctggaaggtgggcgcGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTgggcgg                                                                                            >  1:26405‑M2/92‑140 (MQ=255)                                                   tcgacgcgatggctgagcaaattgaagaagtagcgcgaacggtgccaggcgtagcttctgcgcttgccgagcggctggaaggtgggcgcGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTgggcgggg                                                                                          <  1:1239135‑M2/51‑1 (MQ=255)                                                            tggctgagcaaattgaagaagtagcgcgaacggtgccaggcgtagcttctgcgcttgccgagcggctggaaggtgggcgcGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTg                                                                                 >  1:818470‑M2/81‑140 (MQ=255)                                                             ggctgagcaaattgaagaagtagcgcgaacggtgccaggcgtagcttctgcgcttgccgagcggctggaaggtgggcgcGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTgg                                                                                >  2:1411666‑M2/80‑140 (MQ=255)                                                               ctgagcaaattgaagaagtagcgcgaacggtgccaggcgtagcttctgcgcttgccgagcggctggaaggtgggcgcGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCg                                                                              <  2:883421‑M2/63‑1 (MQ=255)                                                               ctgagcaaattgaagaagtagcgcgaacggtgccaggcgtagcttctgcgcttgccgagcggctggaaggtgggcgcGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCg                                                                              <  2:655291‑M2/63‑1 (MQ=255)                                                                  agcaaattgaagaagtagcgcgaacggtgccaggcgtagcttctgcgcttgccgagcggctggaaggtgggcgcGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGaaa                                                                           <  1:1416006‑M2/66‑1 (MQ=255)                                                                  agcaaattgaagaagtagcgcgaacggtgccaggcgtagcttctgcgcttgccgagcggctggaaggtgggcgcGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGaaa                                                                           <  1:1228478‑M2/66‑1 (MQ=255)                                                                  agcaaattgaagaagtagcgcgaacggtgccaggcgtagcttctgcgcttgccgagcggctggaaggtgggcgcGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGaaa                                                                           <  1:1411666‑M2/66‑1 (MQ=255)                                                                    caaattgaagaagtagcgcgaacggtgccaggcgtagcttctgcgcttgccgagcggctggaaggtgggcgcGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACg                                                                         <  2:1383308‑M2/68‑1 (MQ=255)                                                                    caaattgaagaagtagcgcgaacggtgccaggcgtagcttctgcgcttgccgaccggctggcaggtgggcgcGTATGACGGTGGCGGATGTGCAGTTGCTTGTGCCCTCTGCGGTGGGCGGGGCGCTGGTTGGCGAAACg                                                                         >  2:68809‑M2/73‑140 (MQ=255)                                                                        ttgaagaagtagcgcgaacggtgccaggcgtagcttctgcgcttgccgagcggctggaaggtgggcgcGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTgg                                                                     <  1:1313439‑M2/72‑1 (MQ=255)                                                                         tgaagaagtagcgcgaacggtgccaggcgtagcttctgcgcttgccgagcggctggaaggtgggcgcGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGa                                                                    <  2:1248553‑M2/73‑1 (MQ=255)                                                                               agtagcgcgaacggtgccaggcgtagcttctgcgcttgccgagcggctggaaggtgggcgcGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGAt                                                              <  1:865627‑M2/79‑1 (MQ=255)                                                                               agtagcgcgaacggtgccaggcgtagcttctgcgcttgccgagcggctggaaggtgggcgcGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGAt                                                              <  1:573925‑M2/79‑1 (MQ=255)                                                                                gtagcgcgaacggtgccaggcgtagcttctgcgcttgccgagcggctggaaggtgggcgcGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGAtt                                                             <  1:804706‑M2/80‑1 (MQ=255)                                                                                 tagcgcgaacggtgccaggcgtagcttctgcgcttgccgagcggctggaaggtgggcgcGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTg                                                            >  1:816924‑M2/60‑140 (MQ=255)                                                                                  agcgcgaacggtgccaggcgtagcttctgcgcttgccgagcggctggaaggtgggcgcGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGc                                                           >  2:715794‑M2/59‑140 (MQ=255)                                                                                     gcgaacggtgccaggcgtagcttctgcgcttgccgagcggctggaaggtgggcgcGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCg                                                        >  2:1426879‑M2/56‑140 (MQ=255)                                                                                        aacggtgccaggcgtagcttctgcgcttgccgagcggctggaaggtgggcgcGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTa                                                     <  2:941149‑M2/88‑1 (MQ=255)                                                                                        aacggtgccaggcgtagcttctgcgcttgccgagcggctggaaggtgggcgcGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTa                                                     <  2:227515‑M2/88‑1 (MQ=255)                                                                                        aacggtgccaggcgtagcttctgcgcttgccgagcggctggaaggtgggcgcGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTa                                                     <  2:236088‑M2/88‑1 (MQ=255)                                                                                           ggtgccaggcgtagcttctgcgcttgccgagcggctggaaggtgggcgcGTATGACGGTGGTGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATcc                                                  >  1:1147149‑M2/50‑140 (MQ=255)                                                                                             tgccaggcgtagcttctgcgcttgccgagcggctggaaggggggcgcGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCaa                                                >  2:602727‑M2/48‑140 (MQ=255)                                                                                                  ggcgtagcttctgcgcttgccgagcggctggaaggtgggcgcGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAAt                                           <  1:875621‑M2/98‑1 (MQ=255)                                                                                                  ggcgtagcttctgcgcttgccgagcggctggaaggtgggcgcGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAAt                                           <  1:602727‑M2/98‑1 (MQ=255)                                                                                                  ggcgtagcttctgcgcttgccgagcggctggaaggtgggcgcGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAAt                                           <  2:673920‑M2/98‑1 (MQ=255)                                                                                                  ggcgtagcttctgcgcttgccgagcggctggaaggtgggcgcGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAAt                                           <  2:1078704‑M2/98‑1 (MQ=255)                                                                                                     gtagcttctgcgcttgccgagcggctggaaggtgggcgcGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTg                                        >  1:819639‑M2/40‑140 (MQ=255)                                                                                                       agcttctgcgcttgccgagcggctggaaggtgggcgtGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCg                                      <  2:675401‑M2/103‑1 (MQ=255)                                                                                                       agcttctgcgcttgccgagcggctggaaggtgggcgcGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCg                                      >  1:641538‑M2/38‑140 (MQ=255)                                                                                                       agcttctgcgcttgccgagcggctggaaggtgggcgcGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCg                                      >  2:1424145‑M2/38‑140 (MQ=255)                                                                                                         cttctgcgcttgccgagcggctggaaggtgggcgcGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGtt                                    <  2:831242‑M2/105‑1 (MQ=255)                                                                                                         cttctgcgcttgccgagcggctggaaggtgggcgcGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGtt                                    >  1:935041‑M2/36‑140 (MQ=255)                                                                                                             tgcgcttgccgagcggctggaaggtgggcgcGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTaa                                            <  1:129251‑M2/97‑1 (MQ=255)                                                                                                             tgcgcttgccgagcggctggaaggtgggcgcGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTaa                                            >  2:129251‑M2/32‑128 (MQ=255)                                                                                                             tgcgcttgccgagcggctggaaggtgggcgcGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATcc                                >  1:642367‑M2/32‑140 (MQ=255)                                                                                                                    gccgagcggctggaaggtgggcgcGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGc                         <  2:641538‑M2/116‑1 (MQ=255)                                                                                                                           ggctggaaggtgggcgcGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGcgcg                  <  2:953180‑M2/123‑1 (MQ=255)                                                                                                                             ctggaaggtgggcgcGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGAt                <  2:782638‑M2/125‑1 (MQ=255)                                                                                                                              tggaaggtgggcgcGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATa               >  1:1065201‑M2/15‑140 (MQ=255)                                                                                                                                    gtgggcgcGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGc         <  2:6703‑M2/132‑1 (MQ=255)                                                                                                                                       ggcgcGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAgg      >  1:631556‑M2/6‑140 (MQ=255)                                                                                                                                       ggcgcGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAgg      >  1:1226158‑M2/6‑140 (MQ=255)                                                                                                                                       ggcgcGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGCGGGGGCGATGGTTGCCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTATTCTGCGTTATCCCCAAAGCTGCCCCGATAGTCCGCAgg      >  2:274643‑M2/6‑140 (MQ=255)                                                                                                                                           cGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACt  >  2:239421‑M2/2‑140 (MQ=255)                                                                                                                                           cGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACt  >  1:1369482‑M2/2‑140 (MQ=255)                                                                                                                                            |                                                                                                                                           GCGGATATCGACGCGATGGCTGAGCAAATTGAAGAAGTAGCGCGAACGGTGCCAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCAACGTTGAGATTAACCGTGAAAAAGCCGCACGTTACGGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACT  >  NC_000913/600784‑601061

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑