| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 445,558 | 0 | A | C | 41.3% | 49.6 / 51.2 | 63 | V370G (GTA→GGA) | yajR | putative major facilitator superfamily transport protein YajR |
| Reads supporting (aligned to +/- strand): ref base A (25/12); new base C (0/26); total (25/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.06e-09 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
AACGCACTTTTAACGCCTCGTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCT‑GACCGTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGACTCTTTACTGATAAGTGA > NC_000913/445424‑445694 | aaCGCACTTTTAACGCCTCGTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATAccccc < 2:634004/140‑1 (MQ=255) aCGCACTTTTAACGCCTCGTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCt < 1:751584/140‑1 (MQ=255) aCGCACTTTTAACGCCTCGTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCt < 2:68851/140‑1 (MQ=255) gCACTTTTAACGCCTCGTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCT‑Ga < 2:551762/140‑1 (MQ=255) aCTTTTAACGCCTCGTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCT‑GAcc < 2:803995/140‑1 (MQ=255) ttttAACGCCTCGTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTTATGGTACTGGCGACTGTCAGCCACACTGCGGCCCGCATTGCGCCCGCGAGAAATAACCCCC‑GAcccc > 2:625615/1‑138 (MQ=255) aaCGCCTCGTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGGACTGGCCACCGTCAGCCCCACTGCGGCCGACATTTCGCCAGCGAGAAATACCCCCT‑GACCCTCaaa > 2:847498/1‑140 (MQ=255) aCGCCTCGTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTTCTGGGACTGGCGGCTGTCAGCCACACTGCGGCCCGCATTGCGCCCGCGAGAAAAAACCCCC‑GCCCCTCAAAc > 2:147470/1‑140 (MQ=255) cGCCTCGTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCT‑GACCGTCAAACa < 2:402408/140‑1 (MQ=255) cGCCTCGTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCT‑GACCGTCAAACa < 1:1110769/140‑1 (MQ=255) gCCTCGTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCT‑GACCGTCAAACAt < 2:254123/140‑1 (MQ=255) gCCTCGTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCT‑GACCGTCAAACAt < 1:486493/140‑1 (MQ=255) gTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAAAACCCCCT‑GACCGTCAAACATGCCGt > 1:971500/1‑140 (MQ=255) aTGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCT‑GACCGTCAAACATGCCGTTAATCCAgcc < 1:1153268/140‑1 (MQ=255) tGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTTTTGGTTCTGGCGGCTGTCAGCCCCACTCCGGCCAGCATTGCGCCCCCGAGGAAAAACCCCC‑GTCCGTCAAACAAGCCCGTTATTCAgccc > 2:369120/1‑139 (MQ=255) ttCGCCGGGATTTCAATGCGCAAACTGCTGACATCCGGCGGTTCTTTCATGGTCCTGGCGCCTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAAAAATCCCCCCT‑GACCGTCAAACATGCCGTTAATCCAgccgcc < 2:445956/140‑1 (MQ=255) gATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATCCCCCCT‑GACCGTCAAACATGCCGTTAATCCAGCCGCCCAGCGAAc < 1:956012/140‑1 (MQ=255) cgcAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTTCGCCAGCGAGAAATACCCCCT‑GACCGTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATcgc > 1:195901/1‑140 (MQ=255) cAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCCGCATTTCGCCAGCGAGAAATAACCCCC‑CACCGTCAAACATACCGTTAATTCAGCCGCCCACCGAACCGCCAATcgccc > 2:644884/1‑139 (MQ=255) cAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATCCCCCCT‑GCCCGTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATcgcca < 2:687632/140‑1 (MQ=255) cAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATCCCCCCT‑GACCGTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATcgcca < 2:536345/140‑1 (MQ=255) cAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATCCCCCCT‑GACCGTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATcgcca < 1:1078246/140‑1 (MQ=255) aCTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCT‑GACCGTCAAACATGCCGTTAATCCAGCCGCCCCGCGAACCGCCAATcgccacgc > 1:558/1‑140 (MQ=255) ctgACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCC‑GACCGTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAg > 1:933431/1‑140 (MQ=255) tgccATCCGGCGGTTTTTTCATGGTACTGGCGCCTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAAAAATCCCCCCT‑GCCCGTAAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGa < 2:558/137‑1 (MQ=255) ggggggTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCGGCGAAAAATCCCCCCT‑GACCTTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAActggc < 2:933990/136‑1 (MQ=255) cggcggTTCTTTTATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAAAAACCCCC‑GACCGCCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCCCCAATCGCCACGCCaaaaaaacggc > 2:622275/1‑135 (MQ=255) gTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTTCGCCAGCGAGAAAAACCCCCC‑GACCGTCAAACATGCCGGTAATCCAGCCGCCCCGCGAACCGCCCAACCCCACCCCAAGAAAccggctgggg > 2:235802/1‑138 (MQ=255) ttttttCATGGTACTGGCGCCTGTCAGCCACACGGCGGCCAGCATTGCGCCAGCGAAAAATCCCCCCT‑GACCGTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCtggtgg < 2:1063559/137‑1 (MQ=255) ttCTTTTATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTTCGCCCGCGAGAAAAACCCCCC‑GACCGTCAAACATGCCGTTTATCCAGCCGCCCCGCGAACCCCCAATCGCCACCCCCAAAAAATGGCcggtgg > 2:1007680/1‑140 (MQ=255) tttCATGGTACTGGCGCCTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATCCCCCCT‑GACCGTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGt < 1:162517/140‑1 (MQ=255) tttCAGGGTACGGGCGACTGCCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATCCCCCCT‑GACCGTCAACCATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGt < 2:984311/140‑1 (MQ=255) cATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATCCCCCCT‑GACCGTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTaaa < 1:1571779/140‑1 (MQ=255) gtctgggCGCCTGTCAGCCACAGTGGGGCAGGAATGGCGCCAGGGA‑AAATTCCCCCTGGCCCGCAAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACAcc < 2:975331/135‑1 (MQ=255) tccgggCGCCTGTCAGCCACCCTGCGGCCAGCATTGCGCCAGCGAAAAATCCCCCCT‑GACCGTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACAccc < 2:1302003/136‑1 (MQ=255) tccTGGCGTCTGCCGGCCACCCTGCGGCCAGCTTTGCGCGAGCGAAAAATCCCCCCT‑GACCGCCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACAccc < 1:1572236/138‑1 (MQ=255) tACTGGCGACTGTCACCCACACTGCGGCCAGCATTGCGCCAGGGAGAAATCCCCCCT‑GACCGTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACAccc < 1:657843/140‑1 (MQ=255) tACGGGCGACTGCCAGCCACACTGCGGCCAGCATTGCGCCAGCGAAAAATCCCCCCT‑GACCGCCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACAccc < 2:1489656/140‑1 (MQ=255) cTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCT‑GACCGTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCAt > 1:1489656/1‑140 (MQ=255) cTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCT‑GACCGTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCAt > 2:182942/1‑140 (MQ=255) cTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCT‑GACCGTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCAt > 1:702344/1‑140 (MQ=255) ggCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCT‑GACCGTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCg > 1:478954/1‑140 (MQ=255) gCGACTGTCGCCCACACTGCGGCCAGCATGGCGCCAGCGAAAAATCCCCCCT‑GCCCGTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGc < 2:1333688/140‑1 (MQ=255) gCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATCCCCCCT‑GACCGTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTaaa < 1:1044600/130‑1 (MQ=255) gCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCT‑GACCGTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTaaa > 2:1044600/1‑130 (MQ=255) gCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCT‑GACCGTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGc > 2:22415/1‑140 (MQ=255) gccTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAAAAATCCCCCCT‑GACCGTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCg < 2:195901/138‑1 (MQ=255) tGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATCCCCCCT‑GACCGTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTa < 1:1502849/139‑1 (MQ=255) tGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCT‑TACCGTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTAc > 1:480967/1‑140 (MQ=255) tGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCT‑GACCGTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTa > 2:1502849/1‑139 (MQ=255) tGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCT‑GACCGTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTAc > 1:1002517/1‑140 (MQ=255) tGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCT‑GACCGTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTAc > 2:361410/1‑140 (MQ=255) tGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCT‑GACCGTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTAc > 2:755278/1‑140 (MQ=255) tGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCT‑GACCGTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTAc > 2:1517627/1‑140 (MQ=255) acTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCT‑GACCGTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAAcc > 2:1037818/1‑140 (MQ=255) acTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCT‑GACCGTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAAcc > 1:1369604/1‑140 (MQ=255) cgggggCCAGCTTTGCGCCAGCGAGAAATCCCCCCT‑GCCCGTAAAACATGCCTTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACct < 2:1347647/136‑1 (MQ=255) cggCGGCCAGCATTGCCCCAGCGAAAAATCCCCCCT‑GCCCGTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACct < 2:1002517/138‑1 (MQ=255) tGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCT‑GACCGTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACctg > 1:1204649/1‑140 (MQ=255) cGGCCAGCATTGCGCCAGCGAGAAATACCCCCT‑GACCGTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACctgct < 1:1517627/140‑1 (MQ=255) gCCAGCTTGGCGCCAGCGAAAAACCCCCCCT‑GCCCGTAAACCATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTgg < 2:367492/140‑1 (MQ=255) gCCAGCATTGCGCCAGCGAGAAATACCCCCT‑GACCGTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTgg > 2:1015629/1‑140 (MQ=255) gCCAGCATTGCGCCAGCGAGAAATACCCCCT‑GACCGTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTgg < 1:1037818/140‑1 (MQ=255) gCCAGCATTGCGCCAGCGAAAAATCCCCCCT‑GCCCGTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTgg < 1:955785/140‑1 (MQ=255) cAGCATTGCGCCAGCGAGAAATCCCCCCT‑GCCCGTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCg < 1:366140/140‑1 (MQ=255) agtatggcgcCAGGAAGAAATCCCCCCT‑GCCCGTAAAACATGCCGTTAATCCAGCCCCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGa < 2:314163/134‑1 (MQ=255) aGCATTGCGCCAGCGAGAAATCCCCCCT‑GACCGTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGa < 1:847498/140‑1 (MQ=255) gCATTGCGCCAGCGAGAAATCCCCCCT‑GCCCGTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGAc < 1:1049197/140‑1 (MQ=255) cATTGCGCCAGCGAGAAATACCCCCT‑GACCGTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGAct > 1:317389/1‑140 (MQ=255) cATTGCGCCAGCGAAAAATCCCCCCT‑GCCCGTCAAACATGCCGTTAATCCACCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGAct < 1:329693/140‑1 (MQ=255) cATTGCGCAAGCGAGAAATCCCCCCT‑GACCGTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGAct < 1:1030614/140‑1 (MQ=255) ttGCGCCAGCGAAAAATCCCCCCT‑GCCCGTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGActct < 1:147470/140‑1 (MQ=255) gcgcCAGCGAGAAATCCCCCCT‑GACCGTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGACTCttt < 1:625615/140‑1 (MQ=255) gcgcCAGCGAAAAATCCCCCCT‑GACCGTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGACTCttt < 1:346085/140‑1 (MQ=255) cgcCAGCGAGAAATCCCCCCT‑GCCCGTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGACTCTTTa < 1:1007680/140‑1 (MQ=255) cgcCAGCGAGAAATCCCCCCT‑GACCGTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGActct < 1:52957/137‑1 (MQ=255) cgcCAGCGAGAAATACCCCCT‑GACCGTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGActct > 2:52957/1‑137 (MQ=255) cgcCAGCGAGAAATACCCCCT‑GACCGTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGACTCTTTa > 2:1552605/1‑140 (MQ=255) gCGAGAAATACCCCCT‑GACCGTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGACTCTTTACTGAt > 2:823620/1‑140 (MQ=255) gCGAGAAATACCCCCT‑GACCGTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGACTCTTTACTGAt > 2:598864/1‑140 (MQ=255) aaaaTACCCCGT‑GACGTTAAAACATCCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGACTCTTTACTGATAAGt < 2:1006639/139‑1 (MQ=255) aaTACCCCCT‑GCCCGTAAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGACTCTTTACTGATAAGTGa < 1:1142542/140‑1 (MQ=255) | AACGCACTTTTAACGCCTCGTTTGCGGCAATGTTCGCCGGGATTTCAATGCGCAAACTGCTGACATACGGCGGTTCTTTCATGGTACTGGCGACTGTCAGCCACACTGCGGCCAGCATTGCGCCAGCGAGAAATACCCCCT‑GACCGTCAAACATGCCGTTAATCCAGCCGCCCAGCGAACCGCCAATCGCCACGCCAAGAAACTGGCTGGTGGAGTAAACACCCATCGCCGTACCTTTGTAACCTGCTGGCGACTCTTTACTGATAAGTGA > NC_000913/445424‑445694 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |