Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913888,0140TG23.1% 202.7 / 15.4 91noncoding (44/81 nt)rybBsmall regulatory RNA RybB
Reads supporting (aligned to +/- strand):  ref base T (21/49);  new base G (21/0);  total (42/49)
Fisher's exact test for biased strand distribution p-value = 2.44e-09
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 104 total aligned reads displayed.

GGGATGACGCTGCATTTTGTCACCGACCGTAAGCCGCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGGACA‑TCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGTTGTGCAAAAAAATTTCATTTTCAGGGCAACTTCAGTTTTATCCTAATCCTGGCCA  >  NC_000913/887876‑888151
                                                                                                                                          |                                                                                                                                          
gggATGACGCTGCATTTTGTCACCGACCGTAAGCCGCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGtt                                                                                                                                           >  2:1946524/1‑140 (MQ=255)
 ggATGACGCTGCATTTTGTCACCGACCGTAAGCCGCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTg                                                                                                                                          >  1:1845845/1‑140 (MQ=255)
 ggATGACGCTGCATTTTGTCACCGACCGTAAGCCGCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGTg                                                                                                                                          >  1:2405114/1‑140 (MQ=255)
 ggATGACGCTGCATTTTGTCACCGACCGTAAGCCGCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGTg                                                                                                                                          >  1:1622444/1‑140 (MQ=255)
  gATGACGCTGCATTTTGTCACCGACCGTAAGCCGCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGa                                                                                                                                         >  2:273556/1‑140 (MQ=255)
  gATGACGCTGCATTTTGTCACCGACCGTAAGCCGCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGa                                                                                                                                         >  2:1077643/1‑140 (MQ=255)
   aTGACGCTGCATTTTGTCACCGACCGTAAGCCGCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGAt                                                                                                                                        <  1:1946524/140‑1 (MQ=255)
     gACGCTGCATTTTGTCACCGACCGTAAGCCGCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTg                                                                                                                                          >  2:550047/1‑136 (MQ=255)
     gACGCTGCATTTTGTCACCGACCGTAAGCCGCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTg                                                                                                                                          <  1:550047/136‑1 (MQ=255)
     gACGCTGCATTTTGTCACCGACCGTAAGCCGCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATgg                                                                                                                                      <  1:2287802/140‑1 (MQ=255)
     gACGCTGCATTTTGTCACCGACCGTAAGCCGCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGTGATgg                                                                                                                                      >  1:910947/1‑140 (MQ=255)
      aCGCTGCATTTTGTCACCGACCGTAAGCCGCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATggg                                                                                                                                     <  2:1113198/140‑1 (MQ=255)
      aCGCTGCATTTTGTCACCGACCGTAAGCCGCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATggg                                                                                                                                     <  1:87617/140‑1 (MQ=255)
          tGCATTTTGTCACCGACCGTAAGCCGCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTcc                                                                                                                                 >  1:2250168/1‑140 (MQ=255)
           gCATTTTGTCACCGACCGTAAGCCGCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCca                                                                                                                                <  1:1115043/140‑1 (MQ=255)
            cATTTTGTCACCGACCGTAAGCCGCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCcac                                                                                                                               >  2:476615/1‑140 (MQ=255)
            cATTTTGTCACCGACCGTAAGCCGCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGTTATGGGCTCcac                                                                                                                               >  1:2205941/1‑140 (MQ=255)
               tttGTCACCGACCGTAAGCCGCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACaaa                                                                                                                            <  2:1556747/140‑1 (MQ=255)
                 tGTCACCGACCGTAAGCCGCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAAt                                                                                                                          >  2:352951/1‑140 (MQ=255)
                    cACCGACCGTAAGCCGCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATggg                                                                                                                       <  1:69218/140‑1 (MQ=255)
                    cACCGACCGTAAGCCGCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATggg                                                                                                                       <  1:273556/140‑1 (MQ=255)
                        gaccgTAAGCCGCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTACAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGC‑GGGTTGATGGGCTCCACAAAATGGGGACA‑t                                                                                                                 <  2:1748874/140‑1 (MQ=255)
                           cgTAAGCCGCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATgg                                                                                                                        <  2:270979/132‑1 (MQ=255)
                           cgTAAGCCGCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATgg                                                                                                                        >  1:270979/1‑132 (MQ=255)
                            gTAAGCCGCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGGACA‑TCaa                                                                                                              >  2:1140389/1‑140 (MQ=255)
                            gTAAGCCGCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGTGATGGGCTCCACAAAATGGGGACA‑TCaa                                                                                                              >  2:2094682/1‑140 (MQ=255)
                                 ccGCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTCGATGGGCTCCACAAAATGGGGACA‑TCAAAGaaa                                                                                                         <  2:627094/140‑1 (MQ=255)
                                    cTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTTAACCGAAATGGCGGGGTTGATGGGGTCCACAAAAAGGGGACA‑TCAAAGAAAAGc                                                                                                      >  2:1317522/1‑140 (MQ=255)
                                    cTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGTGATGGGCTCCACAAAATGGGGACA‑TCAAAGAAAAGc                                                                                                      >  2:2140576/1‑140 (MQ=255)
                                     tATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGGACA‑TCAAAGAAAAGCa                                                                                                     <  2:893501/140‑1 (MQ=255)
                                     tATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGTGATGGGCTCCACAAAAAGGGGACA‑TCAAAGAAAAGCa                                                                                                     >  2:302507/1‑140 (MQ=255)
                                      aTCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGGACA‑TCAAAGAAAAGCAg                                                                                                    >  1:2025356/1‑140 (MQ=255)
                                       tCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGGACA‑TCAAAGAAAAGCAGt                                                                                                   <  1:476615/140‑1 (MQ=255)
                                       tCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGGACA‑TCAAAGAAAAGCAGt                                                                                                   >  1:2346602/1‑140 (MQ=255)
                                         gcgcgAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGGACA‑TCAAAGAAAAGCAGTgg                                                                                                 <  1:1396558/140‑1 (MQ=255)
                                           gcgAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGGACA‑TCAAAGAAAAGCAGTGGCa                                                                                               <  2:1932390/140‑1 (MQ=255)
                                           gcgAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGGACA‑TCAAAGAAAAGCAGTGGCa                                                                                               <  2:815084/140‑1 (MQ=255)
                                           gcgAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGGACA‑TCAAAGAAAAGCAGTGGCa                                                                                               <  2:706842/140‑1 (MQ=255)
                                           gcgAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGGACA‑TCAAAGAAAAGCAGTGGCa                                                                                               <  2:1295604/140‑1 (MQ=255)
                                           gcgAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGGACA‑TCAAAGAAAAGCAGTGGCa                                                                                               <  1:1160025/140‑1 (MQ=255)
                                           gcgAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGGACA‑TCAAAGAAAAGCAGTGGCa                                                                                               <  2:202068/140‑1 (MQ=255)
                                           gcgAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGGACA‑TCAAAGAAAAGCAGTGGCa                                                                                               <  2:205397/140‑1 (MQ=255)
                                           gcgAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGGACA‑TCAAAGAAAAGCAGTGGCa                                                                                               <  2:61875/140‑1 (MQ=255)
                                           gcgAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGGACA‑TCAAAGAAAAGCAGTGGCa                                                                                               <  1:219463/140‑1 (MQ=255)
                                           gcgAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGGACA‑TCAAAGAAAAGCAGTGGCa                                                                                               <  1:352951/140‑1 (MQ=255)
                                           gcgAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGGACA‑TCAAAGAAAAGCAGTGGCa                                                                                               <  1:1560445/140‑1 (MQ=255)
                                           gcgAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGGACA‑TCAAAGAAAAGCAGTGGCa                                                                                               <  1:1953541/140‑1 (MQ=255)
                                            cgAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGTGATGGGCTCCACAAAATAGGGACA‑TCAAAGAAAAGCAATGGCAc                                                                                              >  1:1348737/1‑140 (MQ=255)
                                            cgAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGTGATGGGCTCCACAAAAAGGGGACA‑TCAAAGAAAAGCAGTGGCAc                                                                                              >  1:2342544/1‑140 (MQ=255)
                                               ggagATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGGACA‑TCAAAGAAAAGCAGTGGCACTaa                                                                                           >  2:59704/1‑140 (MQ=255)
                                                 agaTTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGGACA‑TCAAAGAAAAGCAGTGGCACTAAtt                                                                                         <  1:2094682/140‑1 (MQ=255)
                                                 agaTTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGGACA‑TCAAAGAAAAGCAGTGGCACTAAtt                                                                                         <  1:1140389/140‑1 (MQ=255)
                                                             tGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGGACA‑TCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGcc                                                                             <  1:2314577/140‑1 (MQ=255)
                                                             tGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGGGGTGGGGCCCACAAAAAAGGGACA‑TCAAAGAAAAAAAGGGGCACTAATTTAAACTGATGcc                                                                             >  2:2314577/1‑140 (MQ=255)
                                                               gTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGTGATGGGCTCCACAAAATGGGGACA‑TCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCt                                                                           >  1:13172/1‑140 (MQ=255)
                                                                ttGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGGACA‑TCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTg                                                                          <  1:864043/140‑1 (MQ=255)
                                                                      gggTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGTGTGGGGCTCCACAAAATGGGGACA‑TCAAAGAAAAGCAGGGGCACTAATTAAGACTGATGCCCTGCGGaaa                                                                    >  2:309341/1‑140 (MQ=255)
                                                                        gTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGTGATGGGCTCCACAAAATGGGGACA‑TCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAg                                                                  >  1:2371601/1‑140 (MQ=255)
                                                                          tGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGTGATGGGCTCCACAAAATGGGGACA‑TCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGtt                                                                >  1:1751038/1‑140 (MQ=255)
                                                                                 tagtagATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGTGATGGGCTCCACAAAAAGGGGACA‑TCAAAAAAAAACAGTGGCACTAATTAAGACTGATGCCCTGCGGGAAAGTTCTGCGGt                                                         >  2:185305/1‑140 (MQ=255)
                                                                                  agtagATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGTGATGGGCTCCACAAAAAGGGGACA‑TCAAAAAAAAGCAGTGGCACTAATTAAAACTGATGCCCTGCGGGAAAGTTCTGCgggt                                                        >  2:1142261/1‑138 (MQ=255)
                                                                                         aaGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGGACA‑TCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGTTGTGCaaa                                                 >  1:1073526/1‑140 (MQ=255)
                                                                                         aaGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGTGATGGGGTCCACAAAATGGGGACA‑TCAAAGAAAAGCAGTGGCACTAATTAAAACTGATGCCCTGCGGAAAAGGTCTGCGGGTGTGCaaa                                                 >  2:648740/1‑140 (MQ=255)
                                                                                           gctttAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGCGATGCTGTGCTCCACCAAATTAGGCCAGTCAAGAAAAAACA‑TGGGACGCATTAAAACAAAAGCCCTGCGGAAAAATTCTTCGGGTGTGCaaaaa                                               >  2:1653887/3‑140 (MQ=255)
                                                                                           gTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGTGATGGGCTCCACAAAATGGGGACA‑TCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGTTGTGCaaaaa                                               >  1:1242807/1‑140 (MQ=255)
                                                                                           gTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGTGATGGGCTCCACAAAAAGGGGACA‑TCAAAGAAAAACAGTGGCACTAATTAAGACTGATGCCCTGCGGGAAAGTTCTGCGGTTGTGCaaaaa                                               >  2:2247157/1‑140 (MQ=255)
                                                                                              ttAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGGACA‑TCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGTTGTGCAAAAAAAt                                            >  1:1458684/1‑140 (MQ=255)
                                                                                              ttAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGGACA‑TCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGTTGTGCAAAAAAAt                                            >  1:672202/1‑140 (MQ=255)
                                                                                              ttAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGGACA‑TCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGTTGTGCAAAAAAAt                                            >  1:2418145/1‑140 (MQ=255)
                                                                                              ttAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGTGATGGGCTCCACAAAAAGGGGACA‑TCCAAGAAAAGCAGTGGCGCTAATTAAGACTGATGCCCCGCGGGAAAATTCTGCGGTTGTGCaaaaaaaa                                            >  2:473198/1‑139 (MQ=255)
                                                                                              ttAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGTGAAGGGCTACACAAAATGGGGACA‑CCCAAGAAAAGCAGTGGCGCTAATTAAGAATGATGCCCTGCGGAAAAATTCTGCGGGTGTGCaaaaaaaa                                            >  2:313281/1‑139 (MQ=255)
                                                                                                aGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGTGATGGGCTCCACAAAATGGGGACA‑TCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGTTGTGCAAAAAAAttt                                          >  1:672563/1‑140 (MQ=255)
                                                                                                 gATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGTGATGGGCTCCACAAAATGGGGACA‑TCAAAGAAAAACAGTGGCACTAATTAAGACTGATTGCCTGCGGAAAAGATCTGCGGTTGTGCAAAAAAAATTc                                         >  1:2273990/1‑140 (MQ=255)
                                                                                                    aaCAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGGACA‑TCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGTTGTGCAAAAAAATTTCAtt                                      <  2:2250168/140‑1 (MQ=255)
                                                                                                      cAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGGACA‑TCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGTTGTGCAAAAAAATTTCAtttt                                    >  1:470350/1‑140 (MQ=255)
                                                                                                      cAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGTGGAGGGGTTCACAAAAAAGGGACA‑TCAAAGAAAAGAAGTAGCCCTAATTAAGACTGATGCCCTGCGGAAAAGGTCTTCGGTTGTGCCAAAAAATTTCAtttt                                    >  2:370265/1‑140 (MQ=255)
                                                                                                      cAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGTGATGGGCTCCACAAAATGGGGACA‑TCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGTTGTGCAAAAAAATTTCAtttt                                    >  1:1513254/1‑140 (MQ=255)
                                                                                                      cAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGGTGATGGGCTCCACAAAATGGGGACA‑TCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGGTGTGCAAAAAAATTTCAtttt                                    >  1:1419414/1‑140 (MQ=255)
                                                                                                           aaCCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGGACA‑TCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGTTGTGCAAAAAAATTTCATTTTCAggg                               <  2:630491/140‑1 (MQ=255)
                                                                                                           aaCCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGGACA‑TCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGTTGTGCAAAAAAATTTCATTTTCAggg                               <  2:2418145/140‑1 (MQ=255)
                                                                                                                 tCAACCTTGAACCGAAATGGCGGGGTTGATGTGCTCCACAAAATGGGGACA‑TCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGTTGTGCAAAAAAATTTCATTTTCAGGGCAAAtt                         >  1:2005277/1‑140 (MQ=255)
                                                                                                                      cTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGGACA‑TCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGTTGTGCAAAAAAATTTCATTTTCAGGGCAACTTCAGtt                    <  1:1976581/140‑1 (MQ=255)
                                                                                                                        tGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGGACA‑TCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGTTGTGCAAAAAAATTTCATTTTCAGGGCAACTTCAGttt                   >  2:2459095/1‑139 (MQ=255)
                                                                                                                        tGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGGACA‑TCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGTTGTGCAAAAAAATTTCATTTTCAGGGCAACTTCAGttt                   <  1:2459095/139‑1 (MQ=255)
                                                                                                                        tGAACCGAAATGGCGGGGGTGATGGGCTCCACAAAATGGGGGCA‑TCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGTTGTGCAAAAAAATTTCATTTTCAGGGCAACTTCAGtttt                  >  2:2006510/1‑140 (MQ=255)
                                                                                                                        tGAACCGAAATGGCGGGGGTGATGGGCTCCACAAAATGGGGACA‑TCAAAGAAAAACAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGTTGTGCAAAAAAATTTCATTTTCAGGGCAACTTCAGtttt                  >  1:1563011/1‑140 (MQ=255)
                                                                                                                           aCCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGGACA‑TCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGTTGTGCAAAAAAATTTCATTTTCAGGGCAACTTCAGTTTTATc               <  2:2487159/140‑1 (MQ=255)
                                                                                                                            ccGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGGACA‑TCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGTTGTGCAAAAAAATTTCATTTTCAGGGCAACTTCAGTTTTATcc              <  2:1845845/140‑1 (MQ=255)
                                                                                                                               aaaTGGCGGGGTTGATGGGGTCCACAAAATGGGGACA‑TCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGTTGTGCAAAAAAATTTCATTTTCAGGGCAACTTCAGTTTTATCCTaa           >  2:1575189/1‑140 (MQ=255)
                                                                                                                               aaaTGGCGGGGTTGATGGGCTCCACAAAATGGGGGCA‑TCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGTTGTGCAAAAAAATTTCATTTTCAGGGCAACTTCAGTTTTATCCTaa           >  1:1447478/1‑140 (MQ=255)
                                                                                                                               aaaTGGCGGGGTTGATGGGCTCCACAAAATGGGGACA‑TCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGTTGTGCAAAAAAATTTCATTTTCAGGGCAACTTCAGTTTTATCCTaa           >  2:49420/1‑140 (MQ=255)
                                                                                                                               aaaTGGCGGGGGTGATGGGCTCCACAAAATGGGGACA‑TCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGTTGTGCAAAAAAATTTCATTTTCAGGGCAACTTCAGTTTTATCCTaa           >  1:2124565/1‑140 (MQ=255)
                                                                                                                                aaTGGCGGGGTTGATGGGCTCCACAAAATGGGGACA‑TCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGTTGTGCAAAAAAATTTCATTTTCAGGGCAACTTCAGTTTTATCCTAAt          <  2:910947/140‑1 (MQ=255)
                                                                                                                                 aTGGCGGGGTTGATGGGCTCCACAAAATGGGGACA‑TCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGTTGTGCAAAAAAATTTCATTTTCAGGGCAACTTCAGTTTTATCCTAATc         <  2:2346602/140‑1 (MQ=255)
                                                                                                                                  tGGCGGGGTTGATGGGCTCCACAAAATGGGGACA‑TCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGTTGTGCAAAAAAATTTCATTTTCAGGGCAACTTCAGTTTTATCCTAATcc        <  2:1425572/140‑1 (MQ=255)
                                                                                                                                  tGGCGGGGTTGATGGGCTCCACAAAATGGGGACA‑TCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGTTGTGCAAAAAAATTTCATTTTCAGGGCAACTTCAGTTTTATCCTAATcc        <  1:1396654/140‑1 (MQ=255)
                                                                                                                                    gCGGGGTTGATGTGCTCCACAAAATGGGGACA‑TCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGTTGTGCAAAAAAATTTCATTTTCAGGGCAACTTCAGTTTTATCCTAATCCTg      <  2:2005277/140‑1 (MQ=255)
                                                                                                                                     cGGGGTTGATGGGCTCCACAAAATGGGGACA‑TCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGTTGTGCAAAAAAATTTCATTTTCAGGGCAACTTCAGTTTTATCCTAATCCTgg     <  1:59704/140‑1 (MQ=255)
                                                                                                                                       ggggTGATGGGGTCCACAAAATGGGGACA‑TCAAAGAAAAGCAGTGGCGCTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGTTGTGCAAAAAAATTTCATTTTTAGGGCAACTTCAGTTTTATCCTAATCCTGGcc   >  2:2416088/1‑140 (MQ=255)
                                                                                                                                        ggTTGATGGGCTCCACAAAATGGGGACA‑TCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGTTGTGCAAAAAAATTTCATTTTCAGGGCAACTTCAGTTTTATCCTAATCCTGGCCa  <  2:1498642/140‑1 (MQ=255)
                                                                                                                                          |                                                                                                                                          
GGGATGACGCTGCATTTTGTCACCGACCGTAAGCCGCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATCAACCTTGAACCGAAATGGCGGGGTTGATGGGCTCCACAAAATGGGGACA‑TCAAAGAAAAGCAGTGGCACTAATTAAGACTGATGCCCTGCGGAAAAGTTCTGCGGTTGTGCAAAAAAATTTCATTTTCAGGGCAACTTCAGTTTTATCCTAATCCTGGCCA  >  NC_000913/887876‑888151

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑