BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,259,149	G→A	L50L (CTG→TTG)	psuK ←	putative pseudouridine kinase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,259,149	0	G	A	100.0%	542.9 / NA	151	L50L (CTG→TTG)	psuK	putative pseudouridine kinase
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (62/89); total (62/89)

Only 100 of 152 total aligned reads displayed.

CGACGTATTTTCTCCCGGCACAATCAGGCATTTATCGACATAAACGCCAGATTGATTGGTTTGCGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAGGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGAATCCGCATAATTTAATGATTCATGTGAATATCCGGCGACATCAATATTCGCCGAACCTATAATTACGACAT  >  NC_000913/2259012‑2259280

cGACGTATTTTCTCCCGGCACAATCAGGCATTTATCGACATAAACGCCAGATTGATTGGTTTGCGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGt                                                                                                                                   >  1:1449436/1‑140 (MQ=255)

 gACGTATTTTCTCCCGGCACAATCAGGCATTTATCGACATAAACGCCAGATTGATTGGTTTGCGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGtt                                                                                                                                  <  1:522575/140‑1 (MQ=255)

 gACGTATTTTCTCCCGGCACAATCAGGCATTTATCGACATAAACGCCAGATTGATTGGTTTGCGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGtt                                                                                                                                  <  2:1449436/140‑1 (MQ=255)

 gACGTATTTTCTCCCGGCACAATCAGGCATTTATAGACATAAACGCCAGATTGATTGGTTTGCGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGtt                                                                                                                                  <  2:1934110/140‑1 (MQ=255)

   cGTATTTTCTCCCGGCACAATCAGGCATTTATCGACATAAACGCCAGATTGATTGGTTTGCGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGtttt                                                                                                                                >  1:1817641/1‑140 (MQ=255)

   cGTATTTTCTCCCGGCACAATCAGGCATTTATCGACATAAACGCCAGATTGATTGGTTTGCGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGtttt                                                                                                                                >  2:366543/1‑140 (MQ=255)

      aTTTTCTCCCGGCACAATCAGGCATTTATCGACATAAACGCCAGATTGATTTGTTTGCGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTtgtg                                                                                                                             <  2:1704398/140‑1 (MQ=255)

        tttCTCCCGGCACAATCAGGCATTTATCGACATAAACGCCAGATTGATTGGTTTGCGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCa                                                                                                                           >  1:2341846/1‑140 (MQ=255)

        tttCTCCCGGCACAATCAGGCATTTATCGACATAAACGCCAGATTGATTGGTTTGCGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCa                                                                                                                           <  1:1812570/140‑1 (MQ=255)

           ctcCCGGCACAATCAGGCATTTATCGACATAAACGCCAGATTGATTGGTTTGCGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCTCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAata                                                                                                                        <  2:945617/140‑1 (MQ=255)

           ctcCCGGCACAATCAGGCATTTATCGACATAAACGCCAGATTGATTGGTTTGCGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAata                                                                                                                        <  1:1153455/140‑1 (MQ=255)

            tcCCGGCACAATCAGGCATTTATCGACATAAACGCCAGATTGATTGGTTTGCGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAatat                                                                                                                       >  1:1165824/1‑140 (MQ=255)

             cccGGCACAATCAGGCATTTATCGACATAAACGCCAGATTGATTGGTTTGCGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATAtt                                                                                                                      <  2:1531201/140‑1 (MQ=255)

             cccGGCACAATCAGGCATTTATCGACATAAACGCCAGATTGATTGGTTTGCGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATAtt                                                                                                                      <  1:1962370/140‑1 (MQ=255)

             cccGGCACAATCAGGCATTTATCGACATAAACGCCAGATTGATTGGTTTGCGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATAtt                                                                                                                      <  1:1517151/140‑1 (MQ=255)

              ccGGCACAATCAGGCATTTATCGACATAAACGCCAGATTGATTGGTTTGCGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTg                                                                                                                     <  2:349563/140‑1 (MQ=255)

                ggCACAATCAGGCATTTATCGACATAAACGCCAGATTGATTGGTTTGCGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGTGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTgcg                                                                                                                   <  2:827892/140‑1 (MQ=255)

                ggCACAATCAGGCATTTATCGACATAAACGCCAGATTGATTGGTTTGCGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTgcg                                                                                                                   >  2:191701/1‑140 (MQ=255)

                 gCACAATCAGGCATTTATCGACATAAACGCCCGATTGATTGGTTTGCGTTAGCAGCGATTGACAATAAACATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTGCCCAGCAACGCCAAGTTTTGTGCAATATTgcgc                                                                                                                  <  2:2464414/140‑1 (MQ=255)

                 gCACAATCAGGCATTTATCGACATAAACGCCAGATTGATTGGTTTGCGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTgcgc                                                                                                                  <  1:1394689/140‑1 (MQ=255)

                 gCACAATCAGGCATTTATCGACATAAACGCCAGATTGATTGGTTTGCGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTgcgc                                                                                                                  <  1:682751/140‑1 (MQ=255)

                 gCACAATCAGGCATTTATCGACATAAACGCCAGATTGATTGGTTTGCGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTgcgc                                                                                                                  <  1:340560/140‑1 (MQ=255)

                 gCACAATCAGGCATTTATCGACATAAACGCCAGATTGATTGGTTTGCGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTgcgc                                                                                                                  >  1:1969571/1‑140 (MQ=255)

                 gCACAATCAGGCATTTATCGACATAAACGCCAGATTGATTGGTTTGCGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTgcgc                                                                                                                  >  1:1981522/1‑140 (MQ=255)

                  cacaATCAGGCATTTATCGACATAAACGCCAGATTGATTGGTTTGCGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGcc                                                                                                                 <  2:1323104/140‑1 (MQ=255)

                  cacaATCAGGCATTTATCGACATAAACGCCAGATTGATTGGTTTGCGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGcc                                                                                                                 <  2:563825/140‑1 (MQ=255)

                    caATCAGGCATTTATCGACATAAACGCCAGATTGATTGGTTTGCGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCt                                                                                                               <  2:2341846/140‑1 (MQ=255)

                      aTCAGGCATTTATCGACATAAACGCCAGATTGATTGGTTTGCGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTAc                                                                                                             >  1:774247/1‑140 (MQ=255)

                            cATTTATCGACATAAACGCCAGATTGATTGGTTTGCGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTccacc                                                                                                       >  1:2042888/1‑140 (MQ=255)

                               ttATCGACATAAACGCCAGATTGATTGGTTTGCGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAgg                                                                                                    >  2:643069/1‑140 (MQ=255)

                                tATCGACATAAACGCCAGATTGATTGGTTTGCGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGc                                                                                                   >  2:1436811/1‑140 (MQ=255)

                                 aTCGACATAAACGCCAGATTGATTGGTTTGCGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCg                                                                                                  >  2:393828/1‑140 (MQ=255)

                                  tCGACATAAACGCCAGATTGATTGGTTTGCGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGt                                                                                                 <  2:477203/140‑1 (MQ=255)

                                         aaaCGCCAGATTGATTGGTTTGCGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAatttt                                                                                          >  2:1303277/1‑140 (MQ=255)

                                         aaaCGCCAGATTGATTGGTTTGCGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAatttt                                                                                          >  1:417268/1‑140 (MQ=255)

                                                aGATTGATTGGTTTGCGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTAc                                                                                   <  1:393828/140‑1 (MQ=255)

                                                aGATTGATTGGTTTGCGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTAc                                                                                   <  1:2298440/140‑1 (MQ=255)

                                                aGATTGATTGGTTTGCGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTAc                                                                                   >  2:985348/1‑140 (MQ=255)

                                                    tgattgGTTTGCGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTgg                                                                               >  1:1794957/1‑140 (MQ=255)

                                                       ttgGTTTGCGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAattttat                                                                                        <  2:400488/128‑1 (MQ=255)

                                                       ttgGTTTGCGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCC‑GGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGAttt                                                                           >  1:1100079/1‑140 (MQ=255)

                                                        tgGTTTGCGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTAc                                                                                   <  2:2020555/132‑1 (MQ=255)

                                                          gTTTGCGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGa                                                                         >  1:471955/1‑140 (MQ=255)

                                                          gTTTGCGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGa                                                                         >  1:2282945/1‑140 (MQ=255)

                                                            ttGCGTTAGCAGCGATTCACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGAAt                                                                       <  2:1179786/140‑1 (MQ=255)

                                                             tGCGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGAATc                                                                      >  1:990779/1‑140 (MQ=255)

                                                                 ttAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGAATCCGCa                                                                  <  1:1302639/140‑1 (MQ=255)

                                                                 ttAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGAATCCGCa                                                                  <  2:2515/140‑1 (MQ=255)

                                                                 ttAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGAATCCGCa                                                                  <  1:1688083/140‑1 (MQ=255)

                                                                 ttAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGAATCCGCa                                                                  <  1:2026601/140‑1 (MQ=255)

                                                                 ttAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGAATCCGCa                                                                  <  2:1165824/140‑1 (MQ=255)

                                                                    gcagcGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGAATCCGCATaa                                                               <  1:1304397/140‑1 (MQ=255)

                                                                    gcagcGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGAATCCGCATaa                                                               >  1:2124991/1‑140 (MQ=255)

                                                                     cagcGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTTAATCCGCATAAt                                                              >  1:1308589/1‑140 (MQ=255)

                                                                     cagcGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGAATCCGCATAAt                                                              <  1:366543/140‑1 (MQ=255)

                                                                         gATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGAATCCGCATAATTTaa                                                          <  1:1030683/140‑1 (MQ=255)

                                                                            tGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGAATCCGCATAATTTAATGa                                                       <  2:2042888/140‑1 (MQ=255)

                                                                            tGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGAATCCGCATAATTTAATGa                                                       <  1:1470460/140‑1 (MQ=255)

                                                                             gACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGAATCCGCATAATTTAATGAt                                                      <  1:2470684/140‑1 (MQ=255)

                                                                             gACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCATAAATTTTATTTTACCTGGATTTGAATCCGCATAATTTAATGAt                                                      <  2:2142175/140‑1 (MQ=255)

                                                                              aCCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGAAt                                                                       >  2:735166/1‑122 (MQ=255)

                                                                               ccATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGAATCCGCATAATTTAATGATTc                                                    <  1:1436811/140‑1 (MQ=255)

                                                                               ccATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGAATCCGCATAATTTAATGATTc                                                    <  2:751032/140‑1 (MQ=255)

                                                                               ccATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGAATCCGCATAATTTAATGATTc                                                    <  2:1104736/140‑1 (MQ=255)

                                                                                cATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGAATCCGCATAATTTAATGATTCa                                                   >  1:1237941/1‑140 (MQ=255)

                                                                                cATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGAATCCGCATAATTTAATGATTCa                                                   <  2:2282945/140‑1 (MQ=255)

                                                                                cATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGAATCCGCATAATTTAATGATTCa                                                   <  2:471955/140‑1 (MQ=255)

                                                                                  tAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGAATCCGCATAATTTAATGATTCAtg                                                 >  2:442022/1‑140 (MQ=255)

                                                                                        tCAGTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGAATCCGCATAATTTAATGATTCATGTGAata                                           <  2:1681567/140‑1 (MQ=255)

                                                                                        tCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGAATCCGCATAATTTAATGATTCATGTGAata                                           >  2:505832/1‑140 (MQ=255)

                                                                                          aCTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGAATCCGCATAATTTAATGATTCATGTGAATATc                                         >  2:933882/1‑140 (MQ=255)

                                                                                            tGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGAATCCGCATAATTTAAt                                                         <  1:766184/122‑1 (MQ=255)

                                                                                            tGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGAATCCGCATAATTTAAt                                                         >  2:766184/1‑122 (MQ=255)

                                                                                             gCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGAATCCGCATAATTTAATGATTCATGTGAATATCCgg                                      >  2:1637131/1‑140 (MQ=255)

                                                                                             gCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGAATCCGCATAATTTAATGATTCATGTGAATATCCgg                                      <  1:2144763/140‑1 (MQ=255)

                                                                                                tACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGAATCCGCATAATTTAATGATTCATGTGAATATCCGGCGa                                   <  1:366/140‑1 (MQ=255)

                                                                                                 aCGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGAATCCGCATAATTTAATGATTCATGTGAATATCCGGCGAc                                  >  2:577665/1‑140 (MQ=255)

                                                                                                   ggCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGAATCCGCATAATTTAATGATTCATGTGAATATCCGGCGACAt                                <  2:636402/140‑1 (MQ=255)

                                                                                                   ggCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGAATCCGCATAATTTAATGATTCATGTGAATATCCGGCGACAt                                <  1:1418096/140‑1 (MQ=255)

                                                                                                        tCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGAATCCGCATAATTTAATGATTCATGTGAATATCCGGCGACATCAata                           >  1:1676726/1‑140 (MQ=255)

                                                                                                              gCCAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGAATCCGCATAATTTAATGATTCATGTGAATATCCGGCGACATCAATATTCGcc                     <  2:2232364/140‑1 (MQ=255)

                                                                                                                cAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGAATCCGCATAATTTAATGATTCATGTGAATATCCGGCGACATCAATATTCGCCGa                   <  1:643069/140‑1 (MQ=255)

                                                                                                                cAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGAATCCGCATAATTTAATGATTCATGTGAATATCCGGCGACATCAATATTCGCCGa                   <  1:2282099/140‑1 (MQ=255)

                                                                                                                cAGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGAATCCGCATAATTTAATGATTCATGTGAATATCCGGCGACATCAATATTCGCCGa                   <  2:140437/140‑1 (MQ=255)

                                                                                                                 aGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGAATCCGCATAATTTAATGATTCATGTGAATATCCGGCGACATCAATATTCGCCg                    >  2:1240836/1‑138 (MQ=255)

                                                                                                                 aGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGAATCCGCATAATTTAATGATTCATGTGAATATCCGGCGACATCAATATTCGCCg                    <  1:1240836/138‑1 (MQ=255)

                                                                                                                 aGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGAATCCGCATAATTTAATGATTCATGTGAATATCCGGCGACATCAATATTCGCCGaa                  <  2:231452/140‑1 (MQ=255)

                                                                                                                 aGGCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGAATCCGCATAATTTAATGATTCATGTGAATATCCGGCGACATCAATATTCGCCGaa                  >  2:2082016/1‑140 (MQ=255)

                                                                                                                  ggCTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGAATCCGCATAATTTAATGATTCATGTGAATATCCGGCGACATCAATATTCGCCGAAc                 <  1:537399/140‑1 (MQ=255)

                                                                                                                    cTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGAATCCGCATAATTTAATGATTCATGTGAATATCCGGCGACATCAATATTCGCCGAACCt               >  1:1947972/1‑140 (MQ=255)

                                                                                                                    cTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGAATCCGCATAATTTAATGATTCATGTGAATATCCGGCGACATCAATATTCGCCGAACCt               <  2:1237941/140‑1 (MQ=255)

                                                                                                                    cTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGAATCCGCATAATTTAATGATTCATGTGAATATCCGGCGACATCAATATTCGCCGAACCt               >  1:1996668/1‑140 (MQ=255)

                                                                                                                    cTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGAATCCGCATAATTTAATGATTCATGTGAATATCCGGCGACATCAATATTCGCCGAACCt               >  1:1767960/1‑140 (MQ=255)

                                                                                                                    cTTTGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGAATCCGCATAATTTAATGATTCATGTGAATATCCGGCGACATCAATATTCGCCGAACCt               <  2:1100079/140‑1 (MQ=255)

                                                                                                                    cTTTGTTA‑CCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGAATCCGCATAATTTAATGATTCATGTGAATATCCGGCGACATCAATATTCGCCGAACCta              >  2:1398946/1‑140 (MQ=255)

                                                                                                                      ttGTTACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGAATCCGCATAATTTAATGATTCATGTGAATATCCGGCGACATCAATATTCGCCGAACCtat             <  1:995465/140‑1 (MQ=255)

                                                                                                                          tACCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGAATCCGCATAATTTAATGATTCATGTGAATATCCGGCGACATCAATATTCGCCGAACCTATAAtt         <  1:371677/140‑1 (MQ=255)

                                                                                                                           aCCCAGCAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGAATCCGCATAATTTAATGATTCATGTGAATATCCGGCGACATCAATATTCGCCGAACCTATAATTa        <  2:2020754/140‑1 (MQ=255)

                                                                                                                                 cAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGAATCCGCATAATTTAATGATTCATGTGAATATCCGGCGACATCAATATTCGCCGAACCTATAATTACGACAt  >  1:920803/1‑140 (MQ=255)

                                                                                                                                 cAACGCCAAGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGAATCCGCATAATTTAATGATTCATGTGAATATCCGGCGACATCAATATTCGCCGAACCTATAATTACGACAt  >  1:1139651/1‑140 (MQ=255)

CGACGTATTTTCTCCCGGCACAATCAGGCATTTATCGACATAAACGCCAGATTGATTGGTTTGCGTTAGCAGCGATTGACCATAAAAATCACTGCCTACGGCGCTCAGTAGCCAGGCTTTGTTACCCAGCAACGCCAGGTTTTGTGCAATATTGCGCCCTACTCCACCAGGCGTAAATTTTATTTTACCTGGATTTGAATCCGCATAATTTAATGATTCATGTGAATATCCGGCGACATCAATATTCGCCGAACCTATAATTACGACAT  >  NC_000913/2259012‑2259280

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`