Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 344,004 G→A intergenic (+71/‑172) yahK → / → yahL aldehyde reductase, NADPH‑dependent/uncharacterized protein YahL

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913344,0040GA100.0% 220.1 / NA 63intergenic (+71/‑172)yahK/yahLaldehyde reductase, NADPH‑dependent/uncharacterized protein YahL
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (36/27);  total (36/27)

CGAATGCTGCGCGGTGATGTGAAATATCGTTTTGTTATCGATAATCGCACACTAACAGACTGAAAAAATTAATAAATACCCTGTGGTTTAACATATTAACTTCGCTCTCCACTTAACTTTTTAGTTAAGGAGAGCGAAATAATATCAAAGTAGCAGTAAAACCTATAACGTAAATTTAAATTGTTAAATTAACGCCCTCCAGTACACAATACTTCACACGTTAGTTATGAGCGATTTCTGATAGTGCCTGGTTTAATCAGAGCTTTA  >  NC_000913/343871‑344137
                                                                                                                                     |                                                                                                                                     
cGAATGCTGCGCGGTGATGTGAAATATCGTTTTGTTATCGATAATCGCACACTAACAGACTGAAAAAATTAATAAATACCCTGTGGTTTAACATATTAACTTCGCTCTCCACTTAACTTTTTAGTTAAGGAGAACGAaat                                                                                                                                 >  1:119593/1‑140 (MQ=255)
  aaTGCTGCGCGGTGATGTGAAATATCGTTTTGTTATCGATAATCGCACACTAACAGACTGAAAAAATTAATAAATACCCTGTGGTTTAACATATTAACTTCGCTCTCCACTTAACTTTTTAGTTAAGGAGAACGAaataa                                                                                                                               >  1:401932/1‑140 (MQ=255)
  aaTGCTGCGCGGTGATGTGAAATATCGTTTTGTTATCGATAATCGCACACTAACAGACTGAAAAAATTAATAAATACCCTGTGGTTTAACATATTAACTTCGCTCTCCACTTAACTTTTTAGTTAAGGAGAACGAaataa                                                                                                                               >  2:293643/1‑140 (MQ=255)
           cgGTGATGTGAAATATCGTTTTGTTATCGATAATCGCACACTAACAGACTGAAAAAATTAATAAATACCCTGTGGTTTAACATATTAACTTCGCTCTCCACTTAACTTTTTAGTTAAGGAGAACGAAATAATATCAAAGt                                                                                                                      <  2:119593/140‑1 (MQ=255)
           cgGTGATGTGAAATATCGTTTTGTTATCGATAATCGCACACTAACAGACTGAAAAAATTAATAAATACCCTGTGGTTTAACATATTAACTTCGCTCTCCACTTAACTTTTTAGTTAAGGAGAACGAAATAATATCAAAGt                                                                                                                      <  1:1296753/140‑1 (MQ=255)
             gTGATGTGAAATATCGTTTTGTTATCGATAATCGCACACTAACAGACTGAAAAAATTAATAAATACCCTGTGGTTTAACATATTAACTTCGCTCTCCACTTAACTTTTTAGTTAAGGAGAACGAAATAATATCAAAGTAg                                                                                                                    <  1:1058769/140‑1 (MQ=255)
             gTGATGTGAAATATCGTTTTGTTATCGATAATCGCACACTAACAGACTGAAAAAATTAATAAATACCCTGTGGTTTAACATATTAACTTCGCTCTCCACTTAACTTTTTAGTTAAGGAGAACGAAATAATATCAAAGTAg                                                                                                                    <  2:439068/140‑1 (MQ=255)
             gTGATGTGAAATATCGTTTTGTTATCGATAATCGCACACTAACAGACTGAAAAAATTAATAAATACCCTGTGGTTTAACATATTAACTTCGCTCTCCACTTAACTTTTTAGTTAAGGAGAACGAAATAATATCAAAGTAg                                                                                                                    >  1:439068/1‑140 (MQ=255)
                         atCGTTTTGTTATCGATAATCGCACACTAACAGACTGAAAAAATTAATAAATACCCTGTGGTTTAACATATTAACTTCGCTCTCCACTTAACTTTTTAGTTAAGGAGAACGAAATAATATCAAAGTAGCAGTAAAACCta                                                                                                        <  2:387842/140‑1 (MQ=255)
                          tCGTTTTGTTATCGATAATCGCACACTAACAGACTGAAAAAATTAATAAATACCCTGTGGTTTAACATATTAACTTCGCTCTCCACTTAACTTTTTAGTTAAGGAGAACGAAATAATATCAAAGTAGCAGTAAAACCtat                                                                                                       >  1:260406/1‑140 (MQ=255)
                               ttGTTATCGATAATCGCACACTAACAGACTGAAAAAATTAATAAATACCCTGTGGTTTAACATATTAACTTCGCTCTCCACTTAACTTTTTAGTTAAGGAGAACGAAATAATATCAAAGTAGCAGTAAAACCTATAACGt                                                                                                  >  2:315503/1‑140 (MQ=255)
                                    aTCGATAATCGCACACTAACAGACTGAAAAAATTAATAAATACCCTGTGGTTTAACATATTAACTTCGCTCTCCACTTAACTTTTTAGTTAAGGAGAACGAAATAATATCAAAGTAGCAGTAAAACCTATAACGtaaatt                                                                                             >  2:725444/1‑140 (MQ=255)
                                            tCGCACACTAACAGACTGAAAAAATTAATAAATACCCTGTGGTTTAACATATTAACTTCGCTCTCCACTTAACTTTTTAGTTAAGGAGAACGAAATAATATCAAAGTAGCAGTAAAACCTATAACGTAAATTTAAATTGt                                                                                     >  2:925766/1‑140 (MQ=255)
                                               cacaCTAACAGACTGAAAAAATTAATAAATACCCTGTGGTTTAACATATTAACTTCGCTCTCCACTTAACTTTTTAGTTAAGGAGAACGAAATAATATCAAAGTAGCAGTAAAACCTATAACGTAAATTTAAATTGTTaa                                                                                  >  1:782523/1‑140 (MQ=255)
                                               cacaCTAACAGACTGAAAAAATTAATAAATACCCTGTGGTTTAACATATTAACTTCGCTCTCCACTTAACTTTTTAGTTAAGGAGAACGAAATAATATCAAAGTAGCAGTAAAACCTATAACGTAAATTTAAATTGTTaa                                                                                  >  1:437132/1‑140 (MQ=255)
                                                      aCAGACTGAAAAAATTAATAAATACCCTGTGGTTTAACATATTAACTTCGCTCTCCACTTAACTTTTTAGTTAAGGAGAACGAAATAATATCAAAGTAGCAGTAAAACCTATAACGTAAATTTAAATTGTTAAATTAACg                                                                           <  2:437132/140‑1 (MQ=255)
                                                      aCAGACTGAAAAAATTAATAAATACCCTGTGGTTTAACATATTAACTTCGCTCTCCACTTAACTTTTTAGTTAAGGAGAACGAAATAATATCAAAGTAGCAGTAAAACCTATAACGTAAATTTAAATTGTTAAATTAACg                                                                           >  2:776828/1‑140 (MQ=255)
                                                       cAGACTGAAAAAATTAATAAATACCCTGTGGTTTAACATATTAACTTCGCTCTCCACTTAACTTTTTAGTTAAGGAGAACGAAATAATATCAAAGTAGCAGTAAAACCTATAACGTAAATTTAAATTGTTAAATTAACGc                                                                          >  1:1163308/1‑140 (MQ=255)
                                                          aCTGAAAAAATTAATAAATACCCTGTGGTTTAACATATTAACTTCGCTCTCCACTTAACTTTTTAGTTAAGGAGAACGAAATAATATCAAAGTAGCAGTAAAACCTATAACGTAAATTTAAATTGTTAAATTAACGCCCt                                                                       >  1:372619/1‑140 (MQ=255)
                                                          aCTGAAAAAATTAATAAATACCCTGTGGTTTAACATATTAACTTCGCTCTCCACTTAACTTTTTAGTTAAGGAGAACGAAATAATATCAAAGTAGCAGTAAAACCTATAACGTAAATTTAAATTGTTAAATTAACGCCCt                                                                       >  1:218348/1‑140 (MQ=255)
                                                           cTGAAAAAATTAATAAATACCCTGTGGTTTAACATATTAACTTCGCTCTCCACTTAACTTTTTAGTTAAGGAGAACGAAATAATATCAAAGTAGCAGTAAAACCTATAACGTAAATTTAAATTGTTAAATTAACGCCCTc                                                                      <  2:529778/140‑1 (MQ=255)
                                                            tGAAAAAATTAATAAATACCCTGTGGTTTAACATATTAACTTCGCTCTCCACTTAACTTTTTAGTTAAGGAGAACGAAATAATATCAAAGTAGCAGTAAAACCTATAACGTAAATTTAAATTGTTAAATTAACg                                                                           <  2:1325697/134‑1 (MQ=255)
                                                            tGAAAAAATTAATAAATACCCTGTGGTTTAACATATTAACTTCGCTCTCCACTTAACTTTTTAGTTAAGGAGAACGAAATAATATCAAAGTAGCAGTAAAACCTATAACGTAAATTTAAATTGTTAAATTAACg                                                                           <  2:1226577/134‑1 (MQ=255)
                                                            tGAAAAAATTAATAAATACCCTGTGGTTTAACATATTAACTTCGCTCTCCACTTAACTTTTTAGTTAAGGAGAACGAAATAATATCAAAGTAGCAGTAAAACCTATAACGTAAATTTAAATTGTTAAATTAACg                                                                           >  1:1226577/1‑134 (MQ=255)
                                                            tGAAAAAATTAATAAATACCCTGTGGTTTAACATATTAACTTCGCTCTCCACTTAACTTTTTAGTTAAGGAGAACGAAATAATATCAAAGTAGCAGTAAAACCTATAACGTAAATTTAAATTGTTAAATTAACg                                                                           >  1:1325697/1‑134 (MQ=255)
                                                            tGAAAAAATTAATAAATACCCTGTGGTTTAACATATTAACTTCGCTCTCCACTTAACTTTTTAGTTAAGGAGAACGAAATAATATCAAAGTAGCAGTAAAACCTATAACGTAAATTTAAATTGTTAAATTAACGCCCTcc                                                                     >  1:686255/1‑140 (MQ=255)
                                                            tGAAAAAATTAATAAATACCCTGTGGTTTAACATATTAACTTCGCTCTCCACTTAACTTTTTAGTTAAGGAGAACGAAATAATATCAAAGTAGCAGTAAAACCTATAACGTAAATTTAAATTGTTAAATTAACGCCCTc                                                                      <  1:422596/139‑1 (MQ=255)
                                                            tGAAAAAATTAATAAATACCCTGTGGTTTAACATATTAACTTCGCTCTCCACTTAACTTTTTAGTTAAGGAGAACGAAATAATATCAAAGTAGCAGTAAAACCTATAACGTAAATTTAAATTGTTAAATTAACGCCCTc                                                                      >  2:422596/1‑139 (MQ=255)
                                                             gAAAAAATTAATAAATACCCTGTGGTTTAACATATTAACTTCGCTCTCCACTTAACTTTTTAGTTAAGGAGAACGAAATAATATCAAAGTAGCAGTAAAACCTATAACGTAAATTTAAATTGTTAAATTAACGCCCTCCa                                                                    <  2:401932/140‑1 (MQ=255)
                                                             gAAAAAATTAATAAATACCCTGTGGTTTAACATATTAACTTCGCTCTCCACTTAACTTTTTAGTTAAGGAGAACGAAATAATATCAAAGTAGCAGTAAAACCTATAACGTAAATTTAAATTGTTAAATTAACGCCCTCCa                                                                    <  2:296240/140‑1 (MQ=255)
                                                             gAAAAAATTAATAAATACCCTGTGGTTTAACATATTAACTTCGCTCTCCACTTAACTTTTTAGTTAAGGAGAACGAAATAATATCAAAGTAGCAGTAAAACCTATAACGTAAATTTAAATTGTTAAATTAACGCCCTCCa                                                                    <  1:293643/140‑1 (MQ=255)
                                                              aaaaaaTTAATAAATACCCTGTGGTTTAACATATTAACTTCGCTCTCCACTTAACTTTTTAGTTAAGGAGAACGAAATAATATCAAAGTAGCAGTAAAACCTATAACGTAAATTTAAATTGTTAAATTAACGCCCTCCAg                                                                   >  1:149243/1‑140 (MQ=255)
                                                              aaaaaaTTAATAAATACCCTGTGGTTTAACATATTAACTTCGCTCTCCACTTAACTTTTTAGTTAAGGAGAACGAAATAATATCAAAGTAGCAGTAAAACCTATAACGTAAATTTAAATTGTTAAATTAACGCCCTCCAg                                                                   >  1:401229/1‑140 (MQ=255)
                                                              aaaaaaTTAATAAATACCCTGTGGTTTAACATATTAACTTCGCTCTCCACTTAACTTTTTAGTTAAGGAGAACGAAATAATATCAAAGTAGCAGTAAAACCTATAACGTAAATTTAAATTGTTAAATTAACGCCCTCCAg                                                                   >  1:1259101/1‑140 (MQ=255)
                                                                  aaTTAATAAATACCCTGTGGTTTAACATATTAACTTCGCTCTCCACTTAACTTTTTAGTTAAGGAGAACGAAATAATATCAAAGTAGCAGTAAAACCTATAACGTAAATTTAAATTGTTAAATTAACGCCCTCCAGTaca                                                               <  1:925766/140‑1 (MQ=255)
                                                                       ataaataCCCTGTGGTTTAACATATTAACTTCGCTCTCCACTTAACTTTTTAGTTAAGGAGAACGAAATAATATCAAAGTAGCAGTAAAACCTATAACGTAAATTTAAATTGTTAAATTAACGCCCTCCAGTACACAATa                                                          <  2:218348/140‑1 (MQ=255)
                                                                            taCCCTGTGGTTTAACATATTAACTTCGCTCTCCACTTAACTTTTTAGTTAAGGAGAACGAAATAATATCAAAGTAGCAGTAAAACCTATAACGTAAATTTAAATTGTTAAATTAACGCCCTCCAGTACACAATACTTca                                                     <  2:782523/140‑1 (MQ=255)
                                                                            taCCCTGTGGTTTAACATATTAACTTCGCTCTCCACTTAACTTTTTAGTTAAGGAGAACGAAATAATATCAAAGTAGCAGTAAAACCTATAACGTAAATTTAAATTGTTAAATTAACGCCCTCCAGTACACAATACTTca                                                     <  2:1229599/140‑1 (MQ=255)
                                                                                  gtgGTTTAACATATTAACTTCGCTCTCCACTTAACTTTTTAGTTAAGGAGAACGAAATAATATCAAAGTAGCAGTAAAACCTATAACGTAAATTTAAATTGTTAAATTAACGCCCTCCAGTACACAATACTTCACACgtt                                               >  1:710006/1‑140 (MQ=255)
                                                                                   tgGTTTAACATATTAACTTCGCTCTCCACTTAACTTTTTAGTTAAGGAGAACGAAATAATATCAAAGTAGCAGTAAAACCTATAACGTAAATTTAAATTGTTAAATTAACGCCCTCCAGTACACAATACTTCACACgtta                                              >  1:991862/1‑140 (MQ=255)
                                                                                   tgGTTTAACATATTAACTTCGCTCTCCACTTAACTTTTTAGTTAAGGAGAACGAAATAATATCAAAGTAGCAGTAAAACCTATAACGTAAATTTAAATTGTTAAATTAACGCCCTCCAGTACACAATACTTCACACgtta                                              >  1:975763/1‑140 (MQ=255)
                                                                                           cATATTAACTTCGCTCTCCACTTAACTTTTTAGTTAAGGAGAACGAAATAATATCAAAGTAGCAGTAAAACCTATAACGTAAATTTAAATTGTTAAATTAACGCCCTCCAGTACACAATACTTCACACGTTAGTTATGAg                                      <  1:776828/140‑1 (MQ=255)
                                                                                             tatTAACTTCGCTCTCCACTTAACTTTTTAGTTAAGGAGAACGAAATAATATCAAAGTAGCAGTAAAACCTATAACGTAAATTTAAATTGTTAAATTAACGCCCTCCAGTACACAATACTTCACACGTTAGTTATGAGCg                                    <  1:315503/140‑1 (MQ=255)
                                                                                               ttAACTTCGCTCTCCACTTAACTTTTTAGTTAAGGAGAACGAAATAATATCAAAGTAGCAGTAAAACCTATAACGTAAATTTAAATTGTTAAATTAACGCCCTCCAGTACACAATACTTCACACGTTAGTTATGAGCGAt                                  >  2:342408/1‑140 (MQ=255)
                                                                                                     tCGCTCTCCACTTAACTTTTTAGTTAAGGAGAACGAAATAATATCAAAGTAGCAGTAAAACCTATAACGTAAATTTAAATTGTTAAATTAACGCCCTCCAGTACACAATACTTCACACGTTAGTTATGAGCGATTTCTGa                            <  2:975763/140‑1 (MQ=255)
                                                                                                     tCGCTCTCCACTTAACTTTTTAGTTAAGGAGAACGAAATAATATCAAAGTAGCAGTAAAACCTATAACGTAAATTTAAATTGTTAAATTAACGCCCTCCAGTACACAATACTTCACACGTTAGTTATGAGCGATTTCTGa                            >  1:381636/1‑140 (MQ=255)
                                                                                                     tCGCTCTCCACTTAACTTTTTAGTTAAGGAGAACGAAATAATATCAAAGTAGCAGTAAAACCTATAACGTAAATTTAAATTGTTAAATTAACGCCCTCCAGTACACAATACTTCACACGTTAGTTATGAGCGATTTCTGa                            >  1:931035/1‑140 (MQ=255)
                                                                                                      cGCTCTCCACTTAACTTTTTAGTTAAGGAGAACGAAATAATATCAAAGTAGCAGTAAAACCTATAACGTAAATTTAAATTGTTAAATTAACGCCCTCCAGTACACAATACTTCACACGTTAGTTATGAg                                      >  2:725225/1‑129 (MQ=255)
                                                                                                      cGCTCTCCACTTAACTTTTTAGTTAAGGAGAACGAAATAATATCAAAGTAGCAGTAAAACCTATAACGTAAATTTAAATTGTTAAATTAACGCCCTCCAGTACACAATACTTCACACGTTAGTTATGAg                                      <  1:725225/129‑1 (MQ=255)
                                                                                                      cGCTCTCCACTTAACTTTTTAGTTAAGGAGAACGAAATAATATCAAAGTAGCAGTAAAACCTATAACGTAAATTTAAATTGTTAAATTAACGCCCTCCAGTACACAATACTTCACACGTTAGTTATGAGCGATTTCTGAt                           <  2:1163308/140‑1 (MQ=255)
                                                                                                       gCTCTCCACTTAACTTTTTAGTTAAGGAGAACGAAATAATATCAAAGTAGCAGTAAAACCTATAACGTAAATTTAAATTGTTAAATTAACGCCCTCCAGTACACAATACTTCACACGTTAGTTATGAGCGATTTCTGATa                          <  2:381636/140‑1 (MQ=255)
                                                                                                        ctctCCACTTAACTTTTTAGTTAAGGAGAACGAAATAATATCAAAGTAGCAGTAAAACCTATAACGTAAATTTAAATTGTTAAATTAACGCCCTCCAGTACACAATACTTCACACGTTAGTTATGAGCGATTTCTGATAg                         >  1:856878/1‑140 (MQ=255)
                                                                                                         tctcCACTTAACTTTTTAGTTAAGGAGAACGAAATAATATCAAAGTAGCAGTAAAACCTATAACGTAAATTTAAATTGTTAAATTAACGCCCTCCAGTACACAATACTTCACACGTTAGTTATGAGCGATTTCTGATAGt                        >  2:252253/1‑140 (MQ=255)
                                                                                                           tcCACTTAACTTTTTAGTTAAGGAGAACGAAATAATATCAAAGTAGCAGTAAAACCTATAACGTAAATTTAAATTGTTAAATTAACGCCCTCCAGTACACAATACTTCACACGTTAGTTATGAGCGATTTCTGATAGTGc                      <  2:372619/140‑1 (MQ=255)
                                                                                                           tcCACTTAACTTTTTAGTTAAGGAGAACGAAATAATATCAAAGTAGCAGTAAAACCTATAACGTAAATTTAAATTGTTAAATTAACGCCCTCCAGTACACAATACTTCACACGTTAGTTATGAGCGATTTCTGATAGTGc                      >  2:678693/1‑140 (MQ=255)
                                                                                                            ccACTTAACTTTTTAGTTAAGGAGAACGAAATAATATCAAAGAAGCAGTAAAACCTATAACGTAAATTTAAATTGTTAAATTAACGCCCTCCAGTACACAATACTTCACACGTTAGTTATGAGCGATTTCTGATAGTGcc                     >  2:1035019/1‑140 (MQ=255)
                                                                                                                   aCTTTTTAGTTAAGGAGAACGAAATAATATCAAAGTAGCAGTAAAACCTATAACGTAAATTTAAATTGTTAAATTAACGCCCTCCAGTACACAATACTTCACACGTTAGTTATGAGCGATTTCTGATAGTGCCTGGTTTa              >  2:168800/1‑140 (MQ=255)
                                                                                                                     tttttAGTTAAGGAGAACGAAATAATATCAAAGTAGCAGTAAAACCTATAACGTAAATTTAAATTGTTAAATTAACGCCCTCCAGTACACAATACTTCACACGTTAGTTATGAGCGATTTCTGATAGTGCCTGGTTTAAt            <  2:531229/140‑1 (MQ=255)
                                                                                                                     tttttAGTTAAGGAGAACGAAATAATATCAAAGTAGCAGTAAAACCTATAACGTAAATTTAAATTGTTAAATTAACGCCCTCCAGTACACAATACTTCACACGTTAGTTATGAGCGATTTCTGATAGTGCCTGGTTTAAt            >  1:1353783/1‑140 (MQ=255)
                                                                                                                         tAGTTAAGGAGAACGAAATAATATCAAAGTAGCAGTAAAACCTATAACGTAAATTTAAATTGTTAAATTAACGCCCTCCAGTACACAATACTTCACACGTTAGTTATGAGCGATTTCTGATAGTGCCTGGTTTAATCaga        >  1:166478/1‑140 (MQ=255)
                                                                                                                              aaGGAGAACGAAATAATATCAAAGTAGCAGTAAAACCTATAACGTAAATTTAAATTGTTAAATTAACGCCCTCCAGTACACAATACTTCACACGTTAGTTATGAGCGATTTCTGATAGTGCCTGGTTTAATCAGAGCttt   <  2:299107/140‑1 (MQ=255)
                                                                                                                               aGGAGAACGAAATAATATCGAAGTAGCAGTAAAACCTATAACGTAAATTTAAATTGTTAAATTAACGCCCTCCAGTACACAATACTTCACACGTTAGTTATGAGCGATTTCTGATAGTGCCTGGTTTAATCAGAGCTtta  <  2:1186751/140‑1 (MQ=255)
                                                                                                                               aGGAGAACGAAATAATATCAAAGTAGCAGTAAAACCTATAACGTAAATTTAAATTGTTAAATTAACGCCCTCCAGTACACAATACTTCACACGTTAGTTATGAGCGATTTCTGATAGTGCCTGGTTTAATCAGAGCTtta  >  1:220035/1‑140 (MQ=255)
                                                                                                                                     |                                                                                                                                     
CGAATGCTGCGCGGTGATGTGAAATATCGTTTTGTTATCGATAATCGCACACTAACAGACTGAAAAAATTAATAAATACCCTGTGGTTTAACATATTAACTTCGCTCTCCACTTAACTTTTTAGTTAAGGAGAGCGAAATAATATCAAAGTAGCAGTAAAACCTATAACGTAAATTTAAATTGTTAAATTAACGCCCTCCAGTACACAATACTTCACACGTTAGTTATGAGCGATTTCTGATAGTGCCTGGTTTAATCAGAGCTTTA  >  NC_000913/343871‑344137

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: