New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3363001 =	40 (1.110)	68 (1.900)	47/274	0.0	77.0%	coding (195/2382 nt)	yhcD	putative fimbrial usher protein YhcD
	?	NC_000913	3766087 =	1 (0.030)					coding (3905/4134 nt)	rhsA	rhs element protein RhsA

ACAATATATAGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTC‑ATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTCGCCATTTACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3363140‑3363001 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACTTCAGGAACTAATTGA  >  NC_000913/3766087‑3766225                                                                                                                                                                                                                                                                                          ACAATATATAGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTC‑ATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTCGCCATTTACT                                                                                                                                             <  2:179288/140‑1  CAATATATAGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTC‑ATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTCGCCATTTACTT                                                                                                                                            <  1:122064/140‑1     TATATAGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTC‑ATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTCGCCATTTACTTAGA                                                                                                                                         >  2:157279/1‑140     TATATAGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTC‑ATCAAAGCGCCTAGCAATGTTGCCTTTTTTTTCGCCATTTACTTAGA                                                                                                                                         >  1:601335/1‑140      ATATAGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTC‑ATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTCGCCATTTACTTAGAT                                                                                                                                        <  2:544264/140‑1       TATAGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTC‑ATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTCGCCATTTACTTAGATA                                                                                                                                       >  2:595439/1‑140       TATAGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTC‑ATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTCGCCATTTACTTAGATA                                                                                                                                       >  2:355488/1‑140          AGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTC‑ATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTCGCCATTTACTTAGATATAA                                                                                                                                    >  2:462451/1‑140          AGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTC‑ATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTCGCCATTTACTTAGATATAA                                                                                                                                    >  2:273223/1‑140             CGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTC‑ATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAA                                                                                                                                 <  2:423180/140‑1               TAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTTATCAAGACAAATGTCGCCATTTTC‑ATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATG                                                                                                                               >  1:465701/1‑140               TAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTC‑ATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATG                                                                                                                               >  1:491577/1‑140               TAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTC‑ATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATG                                                                                                                               >  1:397193/1‑140               TAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTC‑ATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATG                                                                                                                               >  1:342798/1‑140               TAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTC‑ATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATG                                                                                                                               >  2:312385/1‑140                 ACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTC‑ATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGAT                                                                                                                             >  1:39066/1‑140                 ACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTC‑ATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTCGCCATTTACTTAGAT                                                                                                                                        <  2:179371/129‑1                 ACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTC‑ATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTCGCCATTTACTTAGAT                                                                                                                                        >  1:179371/1‑129                   AGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTC‑ATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAG                                                                                                                           <  1:128677/140‑1                     CCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTC‑ATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCT                                                                                                                         >  2:385984/1‑140                     CCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTC‑ATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCT                                                                                                                         >  1:79922/1‑140                             TTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTC‑ATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGG                                                                                                                 <  1:385984/140‑1                               CTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTC‑ATCAAAGCGCCTAGCAATGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAA                                                                                                               <  2:601335/140‑1                                     AAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTC‑ATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTG                                                                                                         <  2:234480/140‑1                                      AGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTC‑ATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGC                                                                                                        <  2:79922/140‑1                                          ATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTC‑ATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGAC                                                                                                    <  1:157279/140‑1                                          ATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTC‑ATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGAC                                                                                                    <  2:491577/140‑1                                           TTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCACCATTTTC‑ATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACA                                                                                                   <  2:343688/140‑1                                            TTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTC‑ATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACAC                                                                                                  <  2:393464/140‑1                                              TTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTC‑ATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAG                                                                                                <  2:397193/140‑1                                               TAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTC‑ATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGG                                                                                               <  2:39066/140‑1                                               TAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTC‑ATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGAC                                                                                                    >  1:452206/1‑135                                               TAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTC‑ATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGAC                                                                                                    <  2:452206/135‑1                                                         TGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTC‑ATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGAT                                                                                     <  1:354203/140‑1                                                          GTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTC‑ATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATC                                                                                    <  1:595439/140‑1                                                          GTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTC‑ATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATC                                                                                    <  1:355488/140‑1                                                                GAAATGCCTGATCAAGACAAATGTCGCCATTTTC‑ATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCA                                                                              <  1:505244/140‑1                                                                 AAATGCCTGATCAAGACAAATGTCGCCATTTTC‑ATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAA                                                                             <  1:45748/140‑1                                                                  AATGCCTGATCAAGACAAATGTCGCCATTTTC‑ATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAAT                                                                            <  2:342798/140‑1                                                                  AATGCCTGATCAAGACAAATGTCGCCATTTTC‑ATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAAT                                                                            <  1:66381/140‑1                                                                    TGCCTGATCAAGACAAATGTCGCCATTTTC‑ATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGA                                                                          >  1:501139/1‑140                                                                      CCTGATCAAGACAAATGTCGCCATTTTC‑ATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACA                                                                        <  1:106951/140‑1                                                                           TCAAGACAAATGTCGCCATTTTC‑ATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATA                                                                   <  1:247153/140‑1                                                                           TCAAGACAAATGTCGCCATTTTC‑ATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATA                                                                   >  2:247153/1‑140                                                                           TCAAGACAAATGTCGCCATTTTC‑ATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATA                                                                   >  1:253473/1‑140                                                                               GACAAATGTCGCCATTTTC‑ATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATG                                                               >  2:612819/1‑140                                                                               GACAAATGTCGCCATTTTC‑ATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATG                                                               >  2:54120/1‑140                                                                               GACAAATGTCGCCATTTTC‑ATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATG                                                               >  1:354043/1‑140                                                                                aaAAATGTCG‑CATTTTCAACCAAACCGCTTAG‑AATGGTTGCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGAC                                                             <  1:173431/138‑1                                                                                 CAAATGTCGCCATTTTC‑ATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGAC                                                             <  1:503237/140‑1                                                                                 CAAATGTCGCCATTTTC‑ATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGAC                                                             <  1:599329/140‑1                                                                                    ATGTCGCCATTTTC‑ATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGA                                                          >  2:443179/1‑140                                                                                     TGTCGCCATTTTC‑ATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGAT                                                         >  1:11943/1‑140                                                                                         GCCATTTTC‑ATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTG                                                     >  1:442272/1‑140                                                                                         GCCATTTTC‑ATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTG                                                     >  1:29658/1‑140                                                                                          CCATTTTC‑ATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGG                                                    >  2:156417/1‑140                                                                                               TTC‑ATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGA                                               <  2:253473/140‑1                                                                                                TC‑ATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGAT                                              <  1:273223/140‑1                                                                                                        AGCGCGTAGCAATGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAA                                       >  2:534015/1‑140                                                                                                              TAGCAATGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCG                                 >  2:28152/1‑140                                                                                                               AGCAATGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGA                                <  1:312385/140‑1                                                                                                                  AATGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAG                             <  2:262446/140‑1                                                                                                                    TGTTGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGAT                           >  2:294230/1‑140                                                                                                                       TGCCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTG                        >  2:194722/1‑140                                                                                                                         CCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGAC                      >  2:478445/1‑140                                                                                                                         CCTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATAGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGAC                      >  2:226940/1‑140                                                                                                                           TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGT                    <  1:612819/140‑1                                                                                                                                 TTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACTTCA              <  2:501139/140‑1                                                                                                                                   CGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACTTCAGG            <  2:465701/140‑1                                                                                                                                             TTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACTTCAGGAACTAATTGA  <  2:354043/140‑1                                                                                                                                             TTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATAGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACTTCAGGAACTAATTGA  <  1:226940/140‑1                                                                                                                                                                                                                                                                                          ACAATATATAGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTC‑ATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTCGCCATTTACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3363140‑3363001 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACTTCAGGAACTAATTGA  >  NC_000913/3766087‑3766225

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.