| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,462,837 | T→C | intergenic (‑177/+217) | nrdD ← / ← treC | anaerobic ribonucleoside‑triphosphate reductase/trehalose‑6‑phosphate hydrolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,462,837 | 0 | T | C | 100.0% | 89.9 / NA | 24 | intergenic (‑177/+217) | nrdD/treC | anaerobic ribonucleoside‑triphosphate reductase/trehalose‑6‑phosphate hydrolase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (7/17); total (7/17) | |||||||||||
TTGGGAAAGGCGTTTTCCGGTTTTTTCGTTTCGTTTTCCGGTGCTTTCCGCAATCGCCATCCGCTTATCCACAACGCCGCACCTTTTTCGTGGGGAGCTGTAGTAGCAATTATAGTCGATTAATACAACATATTGGGTTGGGACGCATTTTAAAGTCTATATATAGTGCTTTGCATCAAGGATGTTTGAGCTTTTTTTGATGTAGCTCAAAGTAAAAAGCAGAGCGTACGGATGACGGGCGCTACAGCGATATGTAAATTTTTTAATGAATTT > NC_000913/4462700‑4462972 | ttGGGAAAGGCGTTTTCCGGTTTTTTCGTTTCGTTTTCCGGTGCTTTCCGCAATCGCCATCCGCTTATCCACAACGCCGCACCTTTTTCGTGGGGAGCTGTAG‑AGCAATTATAGTCGATTAATACAACATAttgggctgg > 1:325375/1‑140 (MQ=255) tGGGAAAGGCGTTTTCCGGTTTTTTCGTTTCGTTTTCCGGTGCTTTCCGCAATCGCCATCCGCTTATCCACAACGCCGCACCTTTTTCGTGGGGAGCT‑‑‑GTAGCAATTATAGTCGATTAATACAACATATTGGGCTGGGAc < 1:300736/140‑1 (MQ=255) ttttCCGGTTTTTTCGTTTCGTTTTCCGGTGCTTTCCGCAATCGCCATCCGCTTATCCACAACGCCGCACCTTTTTCGTGGGGAGCTGTAGTAGCAATTATAGTCGATTAATACAACATATTGGGCTGGGACGCATTTTa < 1:509003/140‑1 (MQ=255) tttCCGGTTTTTTCGTTTCGTTTTCCGGTGCTTTCCGCAATCGCCATCCGCTTATCCACAACGCCGCACCTTTTTCGTGGGGAGCTGTAGTAGCAATTATAGTCGATTAATACAACATATTGGGCTGGGACGCATTTTaa < 1:147312/140‑1 (MQ=255) tttCCGGTTTTTTCGTTTCGTTTTCCGGTGCTTTCCGCAATCGCCATCCGCTTATCCACAACGCCGCACCTTTTTCGTGGGGAGCTGTAGTAGCAATTATAGTCGATTAATACAACATATTGGGCTGGGACGCATTTTaa < 2:110643/140‑1 (MQ=255) tttCCGGTTTTTTCGTTTCGTTTTCCGGTGCTTTCCGCAATCGCCATCCGCTTATCCACAACGCCGCACCTTTTTCGTGGGGAGCTGTAGTAGCAATTATAGTCGATTAATACAACATATTGGGCTGGGACGCATTTTaa < 1:255691/140‑1 (MQ=255) tttCCGGTTTTTTCGTTTCGTTTTCCGGTGCTTTCCGCAATCGCCATCCGCTTATCCACAACGCCGCACCTTTTTCGTGGGGAGCTGTAGTAGCAATTATAGTCGATTAATACAACATATTGGGCTGGGACGCATTTTaa < 1:179378/140‑1 (MQ=255) tCCGGTTTTTTCGTTTCGTTTTCCGGTGCTTTCCGCAATCGCCATCCGCTTATCCACAACGCCGCACCTTTTTCGTGGGGAGCTGTAGTAGCAATTATAGTCGATTAATACAACATATTGGGCTGGGACGCATTTTAAAg < 1:130542/140‑1 (MQ=255) ccGGTTTTTTCGTTTCGTTTTCCGGTGCTTTCCGCAATCGCCATCCGCTTATCCACAACGCCGCACCTTTTTCGTGGGGAGCTGTAGTAGCAATTATAGTCGATTAATACAACATATTGGGCTGGGACGCATTTTAAAGt < 1:318665/140‑1 (MQ=255) ggTTTTTTCGTTTCGTTTTCCGGTGCTTTCCGCAATCGCCATCCGCTTATCCACAACGCCGCACCTTTTTCGTGGGGAGCTGTAGTAGCAATTATAGTCGATTAATACAACATATTGGGCTGGGACGCATTTTAAAGTCt < 2:560818/140‑1 (MQ=255) ggTTTTTTCGTTTCGTTTTCCGGTGCTTTCCGCAATCGCCATCCGCTTATCCACAACGCCGCACCTTTTTCGTGGGGAGCTGTAGTAGCAATTATAGTCGATTAATACAACATATTGGGCTGGGACGCATTTTAAAGTCt < 2:338927/140‑1 (MQ=255) ggTTTTTTCGTTTCGTTTTCCGGTGCTTTCCGCAATCGCCATCCGCTTATCCACAACGCCGCACCTTTTTCGTGGGGAGCTGTAGTAGCAATTATAGTCGATTAATACAACATATTGGGCTGGGACGCATTTTAAAGTCt < 2:165962/140‑1 (MQ=255) tcgtttcgttTTCCGGTGCTTTCCGCAATCGCCATCCGCTTATCCACAACGCCGCACCTTTTTCGTGGGGAGCTGTAGTAGCAATTATAGTCGATTAATACAACATATTGGGCTGGGACGCATTTTAAAGTCtatatata < 2:166728/140‑1 (MQ=255) tcgtttTCCGGTGCTTTCCGCAATCGCCATCCGCTTATCCACAACGCCGCACCTTTTTCGTGGGGAGCTGTAG‑AGCAATTATAGTCGATTAATACAACATATTGGGCTGGGACGCATTTTAAAGTCTATATATAGTGCtt < 2:325375/140‑1 (MQ=255) aTCCGCTTATCCACAACGCCGCACCTTTTTCGTGGGGAGCTGTAGTAGCAATTATAGTCGATTAATACAACATATTGGGCTGGGACGCATTTTAAAGTCTATATATAGTGCTTTGCATCAAGGATGTTTGAGCttttttt > 2:445600/1‑140 (MQ=255) cTTATCCACAACGCCGCACCTTTTTCGTGGGGAGCTGTAGTAGCAATTATAGTCGATTAATACAACATATTGGGCTGGGACGCATTTTAAAGTCTATATATAGTGCTTTGCATCAAGGATGTTTGAGCTTTTTTTGATGt > 1:272266/1‑140 (MQ=255) tATCCACAACGCCGCACCTTTTTCGTGGGGAGCTGTAGTAGCAATTATAGTCGATTAATACAACATATTGGGCTGGGACGCATTTTAAAGTCTATATATAGTGCTTTGCATCAAGGATGTTTGAGCTTTTTTTGATGTAg > 1:363786/1‑140 (MQ=255) aaCGCCGCACCTTTTTCGTGGGGAGCTGTAGTAGCAATTATAGTCGATTAATACAACATATTGGGCTGGGACGCATTTTAAAGTCTATATATAGTGCTTTGCATCAAGGATGTTTGAGCTTTTTTTGATGTAGCTCa > 1:28777/1‑137 (MQ=255) aaCGCCGCACCTTTTTCGTGGGGAGCTGTAGTAGCAATTATAGTCGATTAATACAACATATTGGGCTGGGACGCATTTTAAAGTCTATATATAGTGCTTTGCATCAAGGATGTTTGAGCTTTTTTTGATGTAGCTCa < 2:28777/137‑1 (MQ=255) ccgcACCTTTTTCGTGGGGAGCTGTAGCAGCAATTATAGTCGATTAATACAACATATTGGGCTGGGACGCATTTTAAAGTCTATATATAGTGCTTTGCATCAAGGATGTTTGAGCTTTTTTTGATGTAGCTCAAAGTaaa < 2:586567/140‑1 (MQ=255) cGTGGGGAGCTGTAGTAGCAATTATAGTCGATTAATACAACATATTGGGCTGGGACGCATTTTAAAGTCTATATATAGTGCTTTGCATCAAGGATGTTTGAGCTTTTTTTGATGTAGCTCAAAGTAAAAAGCAGAGCGTa < 1:75996/140‑1 (MQ=255) tagtagCAATTATAGTCGATTAATACAACATATTGGGCTGGGACGCATTTTAAAGTCTATATATAGTGCTTTGCATCAAGGATGTTTGAGCTTTTTTTGATGTAGCTCAAAGTAAAAAGCAGAGCGTACGGATGACGGgc > 2:542524/1‑140 (MQ=255) gtagCAATTATAGTCGATTAATACAACATATTGGGCTGGGACGCATTTTAAAGTCTATATATAGTGCTTTGCATCAAGGATGTTTGAGCTTTTTTTGATGTAGCTCAAAGTAAAAAGCAGAGCGTACGGATGACGGgcgc > 2:121177/1‑140 (MQ=255) aaTTATAGTCGATTAATACAACATATTGGGCTGGGACGCATTTTAAAGTCTATATATAGTGCTTTGCATCAAGGATGTTTGAGCTTTTTTTGATGTAGCTCAAAGTAAAAAGCAGAGCGTACGGATGACggg < 2:247808/132‑1 (MQ=255) aaTTATAGTCGATTAATACAACATATTGGGCTGGGACGCATTTTAAAGTCTATATATAGTGCTTTGCATCAAGGATGTTTGAGCTTTTTTTGATGTAGCTCAAAGTAAAAAGCAGAGCGTACGGATGACggg > 1:247808/1‑132 (MQ=255) tgggctgggACGCATTTTAAAGTCTATATATAGTGCTTTGCATCAAGGATGTTTGAGCTTTTTTTGATGTAGCTCAAAGTAAAAAGCAGAGCGTACGGATGACGGGCGCTACAGCGATATGTAAATTTTTTAATGAAttt > 2:95411/1‑140 (MQ=255) | TTGGGAAAGGCGTTTTCCGGTTTTTTCGTTTCGTTTTCCGGTGCTTTCCGCAATCGCCATCCGCTTATCCACAACGCCGCACCTTTTTCGTGGGGAGCTGTAGTAGCAATTATAGTCGATTAATACAACATATTGGGTTGGGACGCATTTTAAAGTCTATATATAGTGCTTTGCATCAAGGATGTTTGAGCTTTTTTTGATGTAGCTCAAAGTAAAAAGCAGAGCGTACGGATGACGGGCGCTACAGCGATATGTAAATTTTTTAATGAATTT > NC_000913/4462700‑4462972 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |