Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913501,5640AC26.7% 141.0 / 35.2 75*559E (TAA→GAA) ybaLputative transporter YbaL
Reads supporting (aligned to +/- strand):  ref base A (50/5);  new base C (0/20);  total (50/25)
Fisher's exact test for biased strand distribution p-value = 6.62e-14
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 106 total aligned reads displayed.

GTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGG  >  NC_000913/501425‑501700
                                                                                                                                            |                                                                                                                                            
gTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTa                                                                                                                                              >  1:520362/1‑140 (MQ=255)
gTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTa                                                                                                                                              >  2:1968324/1‑140 (MQ=255)
 ttAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTAc                                                                                                                                             >  1:1230601/1‑140 (MQ=255)
 ttAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTAc                                                                                                                                             >  2:774788/1‑140 (MQ=255)
  tAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTAcc                                                                                                                                            >  2:1515105/1‑140 (MQ=255)
    aGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTAcccc                                                                                                                                          <  1:714606/140‑1 (MQ=255)
    aGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTAcccc                                                                                                                                          <  2:1191623/140‑1 (MQ=255)
    aGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTAcccc                                                                                                                                          <  2:1958904/140‑1 (MQ=255)
     gTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCg                                                                                                                                         >  2:918376/1‑140 (MQ=255)
      ttATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGt                                                                                                                                        >  1:462261/1‑140 (MQ=255)
      ttATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGt                                                                                                                                        >  1:1457683/1‑140 (MQ=255)
       tATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGGCGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTc                                                                                                                                       >  2:1125373/1‑140 (MQ=255)
       tATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTc                                                                                                                                       >  2:96696/1‑140 (MQ=255)
         tcgtcgGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTcac                                                                                                                                     >  1:1466789/1‑140 (MQ=255)
          cgtcgGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTcacc                                                                                                                                    >  1:761855/1‑140 (MQ=255)
          cgtcgGTTCGTAGGCCAGATAAGGCGTTCACACCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTcacc                                                                                                                                    >  2:849275/1‑140 (MQ=255)
           gtcgGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTcacca                                                                                                                                   >  2:153620/1‑140 (MQ=255)
           gtcgGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTcacca                                                                                                                                   >  1:1888650/1‑140 (MQ=255)
                  cGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CAcc                                                                                                                        <  1:1322794/140‑1 (MQ=255)
                     gggCAAGATAGGGGGTTCCCGCCGCATCGGGCTTTTGGCTCTCGATGCCTGATGCGCCGCGGGCGCG‑TCTTATCATGCCTACATTTTTTTCATATTTTACACCCGGCACCCCCCTTTTCCCCCGTCCCCACCT‑‑‑‑CCCccgc                                                                                                                     <  2:1547110/139‑1 (MQ=25)
                     aGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACccgc                                                                                                                     >  1:694172/1‑140 (MQ=255)
                         cAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGt                                                                                                                 >  1:1544971/1‑140 (MQ=255)
                            aTAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGc                                                                                                              >  2:267486/1‑140 (MQ=255)
                            aTAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGc                                                                                                              >  2:1026070/1‑140 (MQ=255)
                                 gCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTc                                                                                                         >  2:1837910/1‑140 (MQ=255)
                                   tttCCCGCCGCATCTGGCTTTTGGCTCTCGATCCCTGATGCGCCGCTGGCGCT‑TCTTATCATCCCTACATTTTTTTCATTTTTTACACCCGCCACCCCCCGTTTCCCCCGCCCCCCCCC‑‑‑‑CCCCCGCCGGTGGCGTTTCca                                                                                                       <  2:1230601/139‑1 (MQ=255)
                                    ttCCCGCCGCTTCTGGCTTTTGGCTCTCGATGCCTGATGCGACGCTGGCGCT‑TCTTATCATGCCTACATTTTTTTCATATTTTACATCCGGCACCCACCGTTTCCCCCGCCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCcag                                                                                                      <  2:1416055/140‑1 (MQ=38)
                                    ttCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCT‑TCTTATCATGCCTACATTTTTTTCATATTTTACCCCCGGCAACCACCGTTTCCCCCGTCCCCCCCT‑‑‑‑CACCCGCCGGTGGCGTTTCcag                                                                                                      <  2:1713269/140‑1 (MQ=38)
                                    ttCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTCCCCCGTCCCCCCCT‑‑‑‑CCCCCGCCGGTGGCGTTTCcag                                                                                                      <  1:1514755/140‑1 (MQ=255)
                                    tccccgccgcTTCTGGCTTTTGGCTCCCGGTGCCTGATGCGCGGCTGGCGCG‑TCTTATCATCCCTCCATTTTTTTCATTTTTTCCTCCCGACACCCACCGTTTCCCCCTTCCCCCCCC‑‑‑‑CCCCCGCCGGTGGCGTTTCcag                                                                                                      <  2:1422773/136‑1 (MQ=255)
                                    tccACGCCGCCTCTGGTTTTGGGCTCTCGATGCTTGATGCGACGCTGGGGCG‑TCTTACCATGCCTACATATTTTTCATTTTTTCCCCCCGGCACCCCCGGTTTCCCCGGTCCCCCCCT‑‑‑‑CCCCCGCCGGTGGCGTTTCcag                                                                                                      <  2:1560369/138‑1 (MQ=255)
                                     tCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCACCCACCGTTTCCCCCGTCCCCACCT‑‑‑‑CCCCCGCCGGTGGCGTTTCcagc                                                                                                     <  1:253110/140‑1 (MQ=255)
                                     tCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCcagc                                                                                                     >  1:1907900/1‑140 (MQ=255)
                                     tCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCcagc                                                                                                     >  1:1657505/1‑140 (MQ=255)
                                     tCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCcagc                                                                                                     >  1:409157/1‑140 (MQ=255)
                                      cACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTATATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTCCcagca                                                                                                    >  1:1096694/1‑140 (MQ=255)
                                      cACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCcagca                                                                                                    >  2:441859/1‑140 (MQ=255)
                                      cACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACAGATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCcagca                                                                                                    >  1:688504/1‑140 (MQ=255)
                                        cgccgcATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGt                                                                                                  >  1:277587/1‑140 (MQ=255)
                                         gccgcATCTGGCATTTGGCTCTCGTTGCCTGATGCGCCGCGGGCGCT‑TTTTATCATGCCTACATATTTTTCATATTTTACACCCGGCACCCCCCTTTTCCCCCGTCCCCCCCC‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGtt                                                                                                 <  2:462261/140‑1 (MQ=255)
                                         gccccATCGGGCTTTTGCCTCTCGATGCCTGATGCGCCGCGGGCGCG‑TCTTATCATCCCTACTTTTTTTTCTTTTTTTACCCCCGGAACCCCCCGTTTCCCCCCCCCCCCCCT‑‑‑‑CCCCCGCCGGTGGCGTTTCCAGCAGtt                                                                                                 <  2:1942380/140‑1 (MQ=255)
                                          ccgcATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACACCCGGCAACCCCCGTTTCCCCCGTCCCCCCCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTc                                                                                                <  1:267486/140‑1 (MQ=38)
                                           cgcATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTcc                                                                                               >  1:1801250/1‑140 (MQ=255)
                                           cgcATCGGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTCCCCCGTCACCCCCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTcc                                                                                               <  1:43646/140‑1 (MQ=255)
                                               ttgggCATTTGGTTCTCGATGCAGGTGGCGACGCTGG‑GCGTTTTTTTCTTGCCTCAATTTTTTTAATTTTTTCAATCAGGCACCCCCCTTTTCCCCCGCCCCCCCCT‑‑‑‑CGCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCa                                                                                           <  2:78520/137‑1 (MQ=255)
                                                         ggCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGc                                                                                 >  2:1398118/1‑140 (MQ=255)
                                                         ggCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACACCCGGCACCCCCCGTTTCCCCCGTCCCCCCCT‑‑‑‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGc                                                                                 <  1:511085/140‑1 (MQ=38)
                                                            tctcGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGAt                                                                              >  1:1858310/1‑140 (MQ=255)
                                                             ctcGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACggcgagcg                                                                             >  1:1734313/1‑134 (MQ=255)
                                                              tcGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGAttt                                                                            >  1:1028535/1‑140 (MQ=255)
                                                              tcGATGCCGGATGCGACGCGGGCGCT‑TCTTATCATGCCTACATTTTTTTCATATTTTCCATCCGCCACCCCCCGTTTCCCCCGCCCCCCCCC‑‑‑‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAACATGGTACGGGCGAttt                                                                            <  2:277587/140‑1 (MQ=255)
                                                                   ccctaacgCGACGCTGGCGCG‑TCTTATCTAGCCAACATTTTTTTCATATTTTCCCCCCGACACCCCCCGTTTCCCCCAACCCCCCCC‑‑‑‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGc                                                                       <  2:1888650/133‑1 (MQ=255)
                                                                      tGATGCGCCGCTGGCGTG‑TCTTACCATGCCTACATTTTTTTAATTTTTTCCACCCGGCACCCCCCGTTTCCCCCGCCCCCCCCT‑‑‑‑CACCCGCCGGTGGCGTTCCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCg                                                                    <  2:1096694/140‑1 (MQ=255)
                                                                      tGATGCGCCGCTGGCGCT‑TTTTATCATGCCTATATTTTTTTCATTTTTTACCCCCGGCAACCACCGTTTCCCCCGCCCCCCCCT‑‑‑‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCg                                                                    <  2:1133621/140‑1 (MQ=255)
                                                                       gATGCGCCGCGGGCGCT‑TTTTATCATGCCTCCATTTTTTTCATATTTTACACCCGGCACCCCCCGTTTCCCCCCCCCCCCCCC‑‑‑‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGc                                                                   <  2:658121/140‑1 (MQ=255)
                                                                       gATGCGACGCTGGCGCT‑TTTTATCATGCCTACTTTTTTTTCATATTTTACTCCCGCCACCCCCCGTTTCCCCCGCCCCCCCCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGc                                                                   <  2:1308886/140‑1 (MQ=255)
                                                                          gCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCa                                                                >  2:36280/1‑140 (MQ=255)
                                                                           gcgcggtGGCGCG‑TTTTATCATGCCTACATTTTTTTCATTTTTTACACCCGGCACCCCCCTTTTCCCCCGCCCCCCCCT‑‑‑‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCAt                                                               <  2:409157/134‑1 (MQ=255)
                                                                           cGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCTTTTCCCCCGTCACCCCCC‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCAt                                                               <  1:734636/140‑1 (MQ=255)
                                                                              cGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCAc                                                            >  1:1309527/1‑140 (MQ=255)
                                                                              cGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCAc                                                            >  1:361857/1‑140 (MQ=255)
                                                                              cGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCAc                                                            >  1:525701/1‑140 (MQ=255)
                                                                              cGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCAc                                                            >  2:1086500/1‑140 (MQ=255)
                                                                                 tGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCCCCGTTTCCCCCGTCCCCACCT‑‑‑‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTAc                                                         <  1:122612/140‑1 (MQ=255)
                                                                                   gcgcG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCt                                                       >  1:62801/1‑140 (MQ=255)
                                                                                       ctttttATCATGCCTACATTTTTTTCATTTTTTCCACCCGCCACCCCCCTTTTCCCCCGCCCCCCCCC‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGAt                                                    <  2:950283/136‑1 (MQ=255)
                                                                                         tCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTc                                                  >  1:1892360/1‑140 (MQ=255)
                                                                                            tATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGca                                               >  2:1965175/1‑140 (MQ=255)
                                                                                            tATCATCCCTACATTTTTTTCATATTTTACACCCGGCACCCCCCGTTTCCCCCGCCCCCCCCC‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGca                                               <  2:1028535/140‑1 (MQ=255)
                                                                                              tCATGCCTACATTTTTTTCATTTTTTCCATCCGGCAACCCCCGTTTCCCCCGTCCCCCCCT‑‑‑‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGcacc                                             <  1:1274273/140‑1 (MQ=255)
                                                                                              tCATGCCTACATTTTTTTCATATTTTACATCCGGCAACCCCCGTTTCCCCCGTCACCCCCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGcacc                                             <  1:849275/140‑1 (MQ=255)
                                                                                                 ggCCAACATTTTTTTCATTTTTTACATCCGGCACCCACCGTTTCCCCCATCCCCACCT‑‑‑‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACg                                          <  2:669851/139‑1 (MQ=255)
                                                                                                   ccTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGtt                                        >  1:1318249/1‑140 (MQ=255)
                                                                                                      aaatttttttCATTTTTTCCACCCGGCACCCACCGTTTCCCCCGCCCCCCCCC‑‑‑‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCgg                                     <  2:412362/135‑1 (MQ=255)
                                                                                                      aCATTTTTTTCATTTTTTCCCTCCGACAACCCCCTTTTCCCCCGCCCCCCCCC‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCgg                                     <  2:1318249/140‑1 (MQ=255)
                                                                                                      aCATTTTTTTCATTTTTTCCACCCGGCACCCACCTTTTCCCCCGTCCCCCCCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCgg                                     <  2:688504/140‑1 (MQ=255)
                                                                                                      aCATTTTTTTCATATTTTACATCCGGCACCCACCGTTTCCCCCGTCACCACCT‑‑‑‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCgg                                     <  1:153620/140‑1 (MQ=255)
                                                                                                      aCATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCgg                                     >  2:1894492/1‑140 (MQ=255)
                                                                                                      aCATATTTTTAATATTTTACATCCGGCACCCCCCGTTTCCCCCGTCCCCCCCC‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCgg                                     <  1:1026070/140‑1 (MQ=255)
                                                                                                       cATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGtt                                        >  1:278452/1‑140 (MQ=255)
                                                                                                       cATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGt                                    >  1:1360066/1‑140 (MQ=255)
                                                                                                           tttttCATATTTTACACCCGGCACCCCCCGTTTCCCCCGTCCCCCCCT‑‑‑‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGata                                <  1:1515105/140‑1 (MQ=255)
                                                                                                           ttttcCATATTTTACCCCCGGCAACCACCCTTCCCCCCGCCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGata                                <  1:441859/140‑1 (MQ=255)
                                                                                                            ttttCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGatat                               >  1:1565018/1‑140 (MQ=255)
                                                                                                            ttttCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGatat                               >  1:1584943/1‑140 (MQ=255)
                                                                                                              ttCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATAc                             >  1:195895/1‑140 (MQ=255)
                                                                                                                cATATTTTACCTCCGGCAACCCCCGTTTCCCCCGCCCCCCCCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGc                           <  1:1125373/140‑1 (MQ=255)
                                                                                                                 atatTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGcc                          >  1:429411/1‑140 (MQ=255)
                                                                                                                      ttACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTc                     >  1:944781/1‑140 (MQ=255)
                                                                                                                       tccacccGGCACCCCCCGTTTCCCCCGCCCCCCCCC‑‑‑‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCa                    <  2:1657505/135‑1 (MQ=255)
                                                                                                                       tACACCCGGCACCCCCCGTTCCCCCCTCCCCCCCCC‑‑‑‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCa                    <  2:1360066/140‑1 (MQ=255)
                                                                                                                           cccGGCACCCCCCGTTTCCCCCGTCCCCCCCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGt                <  1:1837910/139‑1 (MQ=255)
                                                                                                                               gCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATa            >  2:111177/1‑140 (MQ=255)
                                                                                                                                   ccaccGTTTCCCCCGTCCCCCCCC‑‑‑‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATgg        <  2:1840555/140‑1 (MQ=255)
                                                                                                                                     cccGTTTCCCCCGTCCCCCCCC‑‑‑‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGgc      <  2:761855/139‑1 (MQ=255)
                                                                                                                                      ccGTTCACCCCGTCACCCCCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGgcg     <  1:422639/140‑1 (MQ=255)
                                                                                                                                       cttttCCCCCGTCCCCACCT‑‑‑‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGgcgc    <  1:103050/138‑1 (MQ=255)
                                                                                                                                       cGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGgcgc    <  1:1965175/140‑1 (MQ=255)
                                                                                                                                        ttttCCCCCGCCCCCCCCC‑‑‑‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGcgcg   <  2:1544971/139‑1 (MQ=255)
                                                                                                                                         tttCCCCCGCCCCCCCCC‑‑‑‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCgg  <  2:434799/140‑1 (MQ=255)
                                                                                                                                            |                                                                                                                                            
GTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGG  >  NC_000913/501425‑501700

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑