| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 501,575 | 0 | A | C | 25.4% | 131.8 / 18.7 | 67 | V555G (GTG→GGG) | ybaL | putative transporter YbaL |
| Reads supporting (aligned to +/- strand): ref base A (42/8); new base C (0/17); total (42/25) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.21e-10 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAAT > NC_000913/501436‑501708 | gtcgGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTcacca > 2:153620/1‑140 (MQ=255)gtcgGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTcacca > 1:1888650/1‑140 (MQ=255) cGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CAcc < 1:1322794/140‑1 (MQ=255) gggCAAGATAGGGGGTTCCCGCCGCATCGGGCTTTTGGCTCTCGATGCCTGATGCGCCGCGGGCGCG‑TCTTATCATGCCTACATTTTTTTCATATTTTACACCCGGCACCCCCCTTTTCCCCCGTCCCCACCT‑‑‑‑CCCccgc < 2:1547110/139‑1 (MQ=25) aGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACccgc > 1:694172/1‑140 (MQ=255) cAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGt > 1:1544971/1‑140 (MQ=255) aTAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGc > 2:1026070/1‑140 (MQ=255) aTAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGc > 2:267486/1‑140 (MQ=255) gCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTc > 2:1837910/1‑140 (MQ=255) tttCCCGCCGCATCTGGCTTTTGGCTCTCGATCCCTGATGCGCCGCTGGCGCT‑TCTTATCATCCCTACATTTTTTTCATTTTTTACACCCGCCACCCCCCGTTTCCCCCGCCCCCCCCC‑‑‑‑CCCCCGCCGGTGGCGTTTCca < 2:1230601/139‑1 (MQ=255) ttCCCGCCGCTTCTGGCTTTTGGCTCTCGATGCCTGATGCGACGCTGGCGCT‑TCTTATCATGCCTACATTTTTTTCATATTTTACATCCGGCACCCACCGTTTCCCCCGCCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCcag < 2:1416055/140‑1 (MQ=38) ttCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCT‑TCTTATCATGCCTACATTTTTTTCATATTTTACCCCCGGCAACCACCGTTTCCCCCGTCCCCCCCT‑‑‑‑CACCCGCCGGTGGCGTTTCcag < 2:1713269/140‑1 (MQ=38) ttCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTCCCCCGTCCCCCCCT‑‑‑‑CCCCCGCCGGTGGCGTTTCcag < 1:1514755/140‑1 (MQ=255) tccccgccgcTTCTGGCTTTTGGCTCCCGGTGCCTGATGCGCGGCTGGCGCG‑TCTTATCATCCCTCCATTTTTTTCATTTTTTCCTCCCGACACCCACCGTTTCCCCCTTCCCCCCCC‑‑‑‑CCCCCGCCGGTGGCGTTTCcag < 2:1422773/136‑1 (MQ=255) tccACGCCGCCTCTGGTTTTGGGCTCTCGATGCTTGATGCGACGCTGGGGCG‑TCTTACCATGCCTACATATTTTTCATTTTTTCCCCCCGGCACCCCCGGTTTCCCCGGTCCCCCCCT‑‑‑‑CCCCCGCCGGTGGCGTTTCcag < 2:1560369/138‑1 (MQ=255) tCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCACCCACCGTTTCCCCCGTCCCCACCT‑‑‑‑CCCCCGCCGGTGGCGTTTCcagc < 1:253110/140‑1 (MQ=255) tCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCcagc > 1:409157/1‑140 (MQ=255) tCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCcagc > 1:1907900/1‑140 (MQ=255) tCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCcagc > 1:1657505/1‑140 (MQ=255) cACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTATATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTCCcagca > 1:1096694/1‑140 (MQ=255) cACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCcagca > 2:441859/1‑140 (MQ=255) cACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACAGATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCcagca > 1:688504/1‑140 (MQ=255) cgccgcATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGt > 1:277587/1‑140 (MQ=255) gccgcATCTGGCATTTGGCTCTCGTTGCCTGATGCGCCGCGGGCGCT‑TTTTATCATGCCTACATATTTTTCATATTTTACACCCGGCACCCCCCTTTTCCCCCGTCCCCCCCC‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGtt < 2:462261/140‑1 (MQ=255) gccccATCGGGCTTTTGCCTCTCGATGCCTGATGCGCCGCGGGCGCG‑TCTTATCATCCCTACTTTTTTTTCTTTTTTTACCCCCGGAACCCCCCGTTTCCCCCCCCCCCCCCT‑‑‑‑CCCCCGCCGGTGGCGTTTCCAGCAGtt < 2:1942380/140‑1 (MQ=255) ccgcATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACACCCGGCAACCCCCGTTTCCCCCGTCCCCCCCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTc < 1:267486/140‑1 (MQ=38) cgcATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTcc > 1:1801250/1‑140 (MQ=255) cgcATCGGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTCCCCCGTCACCCCCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTcc < 1:43646/140‑1 (MQ=255) ttgggCATTTGGTTCTCGATGCAGGTGGCGACGCTGG‑GCGTTTTTTTCTTGCCTCAATTTTTTTAATTTTTTCAATCAGGCACCCCCCTTTTCCCCCGCCCCCCCCT‑‑‑‑CGCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCa < 2:78520/137‑1 (MQ=255) ggCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGc > 2:1398118/1‑140 (MQ=255) ggCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACACCCGGCACCCCCCGTTTCCCCCGTCCCCCCCT‑‑‑‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGc < 1:511085/140‑1 (MQ=38) tctcGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGAt > 1:1858310/1‑140 (MQ=255) ctcGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACggcgagcg > 1:1734313/1‑134 (MQ=255) tcGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGAttt > 1:1028535/1‑140 (MQ=255) tcGATGCCGGATGCGACGCGGGCGCT‑TCTTATCATGCCTACATTTTTTTCATATTTTCCATCCGCCACCCCCCGTTTCCCCCGCCCCCCCCC‑‑‑‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAACATGGTACGGGCGAttt < 2:277587/140‑1 (MQ=255) ccctaacgCGACGCTGGCGCG‑TCTTATCTAGCCAACATTTTTTTCATATTTTCCCCCCGACACCCCCCGTTTCCCCCAACCCCCCCC‑‑‑‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGc < 2:1888650/133‑1 (MQ=255) tGATGCGCCGCTGGCGTG‑TCTTACCATGCCTACATTTTTTTAATTTTTTCCACCCGGCACCCCCCGTTTCCCCCGCCCCCCCCT‑‑‑‑CACCCGCCGGTGGCGTTCCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCg < 2:1096694/140‑1 (MQ=255) tGATGCGCCGCTGGCGCT‑TTTTATCATGCCTATATTTTTTTCATTTTTTACCCCCGGCAACCACCGTTTCCCCCGCCCCCCCCT‑‑‑‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCg < 2:1133621/140‑1 (MQ=255) gATGCGCCGCGGGCGCT‑TTTTATCATGCCTCCATTTTTTTCATATTTTACACCCGGCACCCCCCGTTTCCCCCCCCCCCCCCC‑‑‑‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGc < 2:658121/140‑1 (MQ=255) gATGCGACGCTGGCGCT‑TTTTATCATGCCTACTTTTTTTTCATATTTTACTCCCGCCACCCCCCGTTTCCCCCGCCCCCCCCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGc < 2:1308886/140‑1 (MQ=255) gCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCa > 2:36280/1‑140 (MQ=255) gcgcggtGGCGCG‑TTTTATCATGCCTACATTTTTTTCATTTTTTACACCCGGCACCCCCCTTTTCCCCCGCCCCCCCCT‑‑‑‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCAt < 2:409157/134‑1 (MQ=255) cGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCTTTTCCCCCGTCACCCCCC‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCAt < 1:734636/140‑1 (MQ=255) cGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCAc > 1:1309527/1‑140 (MQ=255) cGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCAc > 2:1086500/1‑140 (MQ=255) cGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCAc > 1:525701/1‑140 (MQ=255) cGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCAc > 1:361857/1‑140 (MQ=255) tGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCCCCGTTTCCCCCGTCCCCACCT‑‑‑‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTAc < 1:122612/140‑1 (MQ=255) gcgcG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCt > 1:62801/1‑140 (MQ=255) ctttttATCATGCCTACATTTTTTTCATTTTTTCCACCCGCCACCCCCCTTTTCCCCCGCCCCCCCCC‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGAt < 2:950283/136‑1 (MQ=255) tCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTc > 1:1892360/1‑140 (MQ=255) tATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGca > 2:1965175/1‑140 (MQ=255) tATCATCCCTACATTTTTTTCATATTTTACACCCGGCACCCCCCGTTTCCCCCGCCCCCCCCC‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGca < 2:1028535/140‑1 (MQ=255) tCATGCCTACATTTTTTTCATTTTTTCCATCCGGCAACCCCCGTTTCCCCCGTCCCCCCCT‑‑‑‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGcacc < 1:1274273/140‑1 (MQ=255) tCATGCCTACATTTTTTTCATATTTTACATCCGGCAACCCCCGTTTCCCCCGTCACCCCCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGcacc < 1:849275/140‑1 (MQ=255) cATGCCTACATATTTTTCATATTTTACATCCGGCAACCCCCGTTTCCCCCGTCCCCCCCT‑‑‑‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGcacca < 1:335678/140‑1 (MQ=255) ggCCAACATTTTTTTCATTTTTTACATCCGGCACCCACCGTTTCCCCCATCCCCACCT‑‑‑‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACg < 2:669851/139‑1 (MQ=255) ccTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGtt > 1:1318249/1‑140 (MQ=255) taaatttttttCTTTTTTTACACCCGCCACCCCCCTTTCCCCCCCCCCCCCCCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCg < 2:1457683/134‑1 (MQ=255) aaatttttttCATTTTTTCCACCCGGCACCCACCGTTTCCCCCGCCCCCCCCC‑‑‑‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCgg < 2:412362/135‑1 (MQ=255) aCATTTTTTTCATTTTTTCCCTCCGACAACCCCCTTTTCCCCCGCCCCCCCCC‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCgg < 2:1318249/140‑1 (MQ=255) aCATTTTTTTCATTTTTTCCACCCGGCACCCACCTTTTCCCCCGTCCCCCCCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCgg < 2:688504/140‑1 (MQ=255) aCATTTTTTTCATATTTTACATCCGGCACCCACCGTTTCCCCCGTCACCACCT‑‑‑‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCgg < 1:153620/140‑1 (MQ=255) aCATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCgg > 2:1894492/1‑140 (MQ=255) aCATATTTTTAATATTTTACATCCGGCACCCCCCGTTTCCCCCGTCCCCCCCC‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCgg < 1:1026070/140‑1 (MQ=255) cATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCTCACCCACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGtt > 1:278452/1‑140 (MQ=255) cATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGt > 1:1360066/1‑140 (MQ=255) tttttCATATTTTACACCCGGCACCCCCCGTTTCCCCCGTCCCCCCCT‑‑‑‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGata < 1:1515105/140‑1 (MQ=255) ttttcCATATTTTACCCCCGGCAACCACCCTTCCCCCCGCCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGata < 1:441859/140‑1 (MQ=255) ttttCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGatat > 1:1565018/1‑140 (MQ=255) ttttCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGatat > 1:1584943/1‑140 (MQ=255) ttCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATAc > 1:195895/1‑140 (MQ=255) cATATTTTACCTCCGGCAACCCCCGTTTCCCCCGCCCCCCCCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGc < 1:1125373/140‑1 (MQ=255) atatTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGcc > 1:429411/1‑140 (MQ=255) tatTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCa > 1:1539082/1‑140 (MQ=255) ttACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTc > 1:944781/1‑140 (MQ=255) tccacccGGCACCCCCCGTTTCCCCCGCCCCCCCCC‑‑‑‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCa < 2:1657505/135‑1 (MQ=255) tACACCCGGCACCCCCCGTTCCCCCCTCCCCCCCCC‑‑‑‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCa < 2:1360066/140‑1 (MQ=255) cccGGCACCCCCCGTTTCCCCCGTCCCCCCCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGt < 1:1837910/139‑1 (MQ=255) gCAACCACCTTTTCCCCCGCCCCCCCCC‑‑‑‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATa < 1:848392/140‑1 (MQ=255) gCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATa > 2:111177/1‑140 (MQ=255) ccaccGTTTCCCCCGTCCCCCCCC‑‑‑‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATgg < 2:1840555/140‑1 (MQ=255) cccGTTTCCCCCGTCCCCCCCC‑‑‑‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGgc < 2:761855/139‑1 (MQ=255) ccGTTCACCCCGTCACCCCCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGgcg < 1:422639/140‑1 (MQ=255) cttttCCCCCGTCCCCACCT‑‑‑‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGgcgc < 1:103050/138‑1 (MQ=255) cGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGgcgc < 1:1965175/140‑1 (MQ=255) ttttCCCCCGCCCCCCCCC‑‑‑‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGcgcg < 2:1544971/139‑1 (MQ=255) tttCCCCCGCCCCCCCCC‑‑‑‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCgg < 2:434799/140‑1 (MQ=255) tcccccGCCCCCCCCC‑‑‑‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGc < 2:195895/138‑1 (MQ=255) cccccCTCACCCCCA‑‑‑‑CCCCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCa < 1:977616/139‑1 (MQ=255) ccGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCaata < 1:1398118/140‑1 (MQ=255) gTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCaataat > 1:903212/1‑140 (MQ=255) gTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCaataat > 1:64883/1‑140 (MQ=255) gTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCaataat > 2:1513292/1‑140 (MQ=255) gTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCaataat > 2:276817/1‑140 (MQ=255) gTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCaataat > 2:1519028/1‑140 (MQ=255) gTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCaataat > 1:1666104/1‑140 (MQ=255) | GTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCG‑TCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACCT‑‑‑‑CACCCGCCGGTGGCGTTTCCAGCAGTTCCAGCATGGTACGGGCGATTTCACGCTCGCCCATCACTACCTGATTCGCACCACGTTCGGTGATATACGCCACTTCATCGTCATAATGGGCGCGGGCAATAAT > NC_000913/501436‑501708 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |