Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,287,7190TA27.2% 164.5 / 33.9 81intergenic (‑348/‑45)acs/nrfAacetyl‑CoA synthetase (AMP‑forming)/cytochrome c552 nitrite reductase
Reads supporting (aligned to +/- strand):  ref base T (50/9);  new base A (0/22);  total (50/31)
Fisher's exact test for biased strand distribution p-value = 5.42e-13
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

GACTAACTCTAAAGTGGTATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCT  >  NC_000913/4287586‑4287853
                                                                                                                                     |                                                                                                                                      
gACTAACTCTAAAGTGGTATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAAc                                                                                                                                  >  2:41763/1‑140 (MQ=255)
aaCTAACTCTAAAGTGGTTTTTTACATGCCTTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGAAATGTCATGACAGTGTAGGTGGGGTTACTGTCGTAAAAAACAAAAAAAAc                                                                                                                                  <  2:320062/139‑1 (MQ=255)
 aCTAACTCTAAAGTGGTATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAAcc                                                                                                                                 >  1:547430/1‑140 (MQ=255)
   tAACTCTAAAGTGGTATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGTTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTAAAAAACAAAAAAAACCGc                                                                                                                               <  2:70968/140‑1 (MQ=255)
    aaCTCTAAAGTGGTATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGAAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTAAAAAACAAAAAAAACCGcc                                                                                                                              <  2:879593/140‑1 (MQ=255)
     aCTCTAAAGTGGTATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCa                                                                                                                             >  2:1152807/1‑140 (MQ=255)
      ctctAAAGTGGTATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCAt                                                                                                                            >  1:1293654/1‑140 (MQ=255)
      ctctAAAGTGGTATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCAt                                                                                                                            >  1:1329308/1‑140 (MQ=255)
         tAAAGTGGTATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGc                                                                                                                         >  1:70036/1‑140 (MQ=255)
           aaGTGGTATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGcaa                                                                                                                       >  1:935106/1‑140 (MQ=255)
                 tATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATTTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGcaacaa                                                                                                                    <  1:947809/137‑1 (MQ=255)
                 tATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGcaacaa                                                                                                                    >  2:947809/1‑137 (MQ=255)
                 tATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATgg                                                                                                                 >  1:1251657/1‑140 (MQ=255)
                 tATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATgg                                                                                                                 >  2:1308635/1‑140 (MQ=255)
                   ttttACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGTTTATTTGTTACACATGGGGGCGAGCAATGTCATGACAGTGTAGGTGGGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGgcg                                                                                                               <  1:846865/140‑1 (MQ=255)
                   ttttACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATTTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGgcg                                                                                                               <  1:1065418/140‑1 (MQ=255)
                        cATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATTTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAAtt                                                                                                          <  1:554400/140‑1 (MQ=255)
                        cATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAAtt                                                                                                          >  1:1380927/1‑140 (MQ=255)
                        cATGCACTTAAAATTGATTAAAGAAAACATTCACAGTGTGTTTATTTGTTACACATAGGGGCGAGAAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAAAAAAAACCGCCATTGCAACAATGGCGCAAtt                                                                                                          <  2:70036/140‑1 (MQ=255)
                          acaccTTAAAATTGATAAAAGACAACATTAACAGTGTGGTTTTTTGTTACCAATGGGGGCGAGCAATGTAAGGACAGTGTAGGGGGGGTTACTGTCGTAAAAAACAAAAAAAACCGCCATTGCAACAATGGCGCAATTCg                                                                                                        <  2:583807/136‑1 (MQ=255)
                           gCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCgg                                                                                                       >  1:411474/1‑140 (MQ=255)
                           gCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCgg                                                                                                       >  2:1124052/1‑140 (MQ=255)
                             aCTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGAt                                                                                                     >  1:1127791/1‑140 (MQ=255)
                                taaaaTTGATAAAAGACAACATTCACAGTGTGGTTATTTGTTACACATGGGGGCGAGAAATGTCATGACAGTGTAGGTGCGTTTACTGTCGTAAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGaa                                                                                                  <  2:1121907/137‑1 (MQ=255)
                                tACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGaa                                                                                                  <  1:1373868/140‑1 (MQ=255)
                                 aCAATTGATAAAAGACAACATTCACGGTGTGGTTATTTTTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGGGGTTACTGTCGTAAAAAACAAAAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAg                                                                                                 <  2:1196888/140‑1 (MQ=255)
                                     ttGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGcccc                                                                                             <  1:41763/140‑1 (MQ=255)
                                         ttAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGctgcctgt                                                                                         >  1:583807/1‑133 (MQ=255)
                                         ttAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATg                                                                                         >  2:1196507/1‑140 (MQ=255)
                                         ttAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATg                                                                                         >  1:289197/1‑140 (MQ=255)
                                           aaaGACAATATTCACGGTGTGGTTATTTGTTACACATAGGGGCGACCAATGTCATGACAGTGTAGGTGCGTTTACTGCCGTAAAAAACAAAAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGAc                                                                                       <  2:625770/140‑1 (MQ=255)
                                            aaGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTAAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACa                                                                                      <  1:23420/140‑1 (MQ=255)
                                            aaGAAAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGAAATGTCATGACAGTGTAGGGGGGGTTACTGTCGTAAAAAACAAAAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACa                                                                                      <  2:532334/140‑1 (MQ=255)
                                                   caTTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATaa                                                                               >  2:838860/1‑140 (MQ=255)
                                                   caTTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATaa                                                                               >  1:347064/1‑140 (MQ=255)
                                                            tgtgTTTTTTTTTTACACATGGGGGCGAGCAATTTATTGCGGGTGTGGGGGCGGTTCCTCTGGTAAAAAAAAAAAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAacg                                                                      <  2:1053460/140‑1 (MQ=255)
                                                             gtgttattttGTTACACAAAGGGGCGAGAAATGTCAGGAAAGTGTGGGGGGGGTTCTTGTCGAAAAAAACAAAAAAACCCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAacgc                                                                     <  2:597607/133‑1 (MQ=255)
                                                              tgGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAacgca                                                                    >  2:728686/1‑140 (MQ=255)
                                                              tgGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAacgca                                                                    >  1:1053460/1‑140 (MQ=255)
                                                              tgGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAacgca                                                                    >  1:1046560/1‑140 (MQ=255)
                                                              tgGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAacgca                                                                    >  1:447040/1‑140 (MQ=255)
                                                               gttttttttttACAAATAGGGGCGAATAATCTAATAACAGTGTAGGTGCGTTTACTGTCGTAAAAAACAAAAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAacgcac                                                                   <  2:289197/135‑1 (MQ=255)
                                                               ggTTTTTTGTTACAAATGGGGGCGACAATTGTAATGACAGTGTAGGGGGGGTTACTGTCGTAAAAAAAAAAAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAacgcac                                                                   <  2:1329308/140‑1 (MQ=255)
                                                               ggTTTTTTGTTACAAAAGGGGGCGAGAAATGTCATGACGGTGTGGGGGGGTTTACTGTCGTAAAAAAAAAAAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAacgcac                                                                   <  2:964936/140‑1 (MQ=255)
                                                               ggTTTTTTGTTACAAAAAGGGGGGAGCAATGTCATGACAGTGTAGGTGCGTTTACTGTGGTAAAAAACAAAAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAacgcac                                                                   <  2:1293654/140‑1 (MQ=255)
                                                                gTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAacgcacg                                                                  >  2:98879/1‑140 (MQ=255)
                                                                 ttATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAacgcacgc                                                                 >  1:1481028/1‑140 (MQ=255)
                                                                  ttttttttACACAGGGGGGCGAGCAATGTCATGACAGTGTGGGGGCGGTTACTGTCGAAAAAAAAAAAAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGcc                                                                <  2:1217694/138‑1 (MQ=255)
                                                                  tttttGTAACAAATGGGGGCGAGAAATGTCATGACAGTGGGGGTGCGGTTACTGTCTAAAAAAACAAAAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGcc                                                                <  2:623606/138‑1 (MQ=255)
                                                                  tATTTTTTACACAGGGGGGCGAGAAATGTCATGACAGTGTAGGTGCGTTTACTGTCGAAAAAAAAAAAAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGcc                                                                <  2:1251657/140‑1 (MQ=255)
                                                                      tGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTAt                                                            >  1:427293/1‑140 (MQ=255)
                                                                      tGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTAt                                                            >  2:575249/1‑140 (MQ=255)
                                                                        ttACACATGGGGGCGAGCATTTTCATGACAGTGTAGGTGCGGTTCCTGTGGTAAAAAACAAAAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCt                                                          <  1:501677/140‑1 (MQ=255)
                                                                        ttACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCt                                                          >  2:152761/1‑140 (MQ=255)
                                                                         aacacAAAGGGGAGAAAAATGTCATAAAAGGGGAGGGGGGTTTCCTGGGGAAAAAAAAAAAAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCtt                                                         <  2:1158324/139‑1 (MQ=255)
                                                                            aaaggggggCGAGAAATGTAATGACAGTGTGGGTGCGTTTACTGTGGAAAAAAAAAAAAAAACCCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAg                                                      <  2:1127791/135‑1 (MQ=255)
                                                                                aGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTa                                                  >  2:1351753/1‑140 (MQ=255)
                                                                                  gggCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTAtt                                                >  2:768991/1‑140 (MQ=255)
                                                                                  gggCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTAtt                                                >  1:1445612/1‑140 (MQ=255)
                                                                                  gggCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTAtt                                                >  1:726016/1‑140 (MQ=255)
                                                                                  gggCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTAtt                                                >  1:603737/1‑140 (MQ=255)
                                                                                  gggCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTAtt                                                >  2:352106/1‑140 (MQ=255)
                                                                                  gggCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTAtt                                                >  2:261305/1‑140 (MQ=255)
                                                                                  gggCGAAAAATGTAATGACAGTGTAGGTGCGTTTACTGTCGTAAAAAAAAAAAAAACCCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTAtt                                                <  2:814319/140‑1 (MQ=255)
                                                                                      gAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGAtt                                            >  1:303500/1‑140 (MQ=255)
                                                                                             gtaaTGACGGTGGGGGTGGGTTTACTGTCGAAAAAAAAAAAAAAACCCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCttttt                                     <  1:361410/137‑1 (MQ=255)
                                                                                              tCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCtttttt                                    >  1:836581/1‑140 (MQ=255)
                                                                                               caggACAGTGTGGGTGCGGTTACTGTCGTAAAAAAAAAAAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTtttttc                                   <  1:1308635/137‑1 (MQ=255)
                                                                                                    aggtgtAGGGGCGGTTACTGTCGTAAAAAAAAAAAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTtttttcttttt                              <  2:836581/138‑1 (MQ=255)
                                                                                                      gtgtAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCa                            >  1:1124136/1‑140 (MQ=255)
                                                                                                       tgtAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCAc                           >  1:1351302/1‑140 (MQ=255)
                                                                                                       tgtAGGTGAGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCAc                           >  2:208243/1‑140 (MQ=255)
                                                                                                            gTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTg                      >  2:356036/1‑140 (MQ=255)
                                                                                                                 gTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCATGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCAc                 >  2:902066/1‑140 (MQ=255)
                                                                                                                 gTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCAc                 >  1:198376/1‑140 (MQ=255)
                                                                                                                 gTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCAc                 >  2:861297/1‑140 (MQ=255)
                                                                                                                 gTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCAc                 >  2:553810/1‑140 (MQ=255)
                                                                                                                 gTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCAc                 >  2:549541/1‑140 (MQ=255)
                                                                                                                  ttACTGTCGTAAAAAACAATAAAACCCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACg                <  2:608717/140‑1 (MQ=255)
                                                                                                                   tACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGc               >  1:1479189/1‑140 (MQ=255)
                                                                                                                   tACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGc               >  1:176703/1‑140 (MQ=255)
                                                                                                                   tACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGc               >  1:559830/1‑140 (MQ=255)
                                                                                                                                aaCAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGgct  >  1:144498/1‑140 (MQ=255)
                                                                                                                                     |                                                                                                                                      
GACTAACTCTAAAGTGGTATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTTACTGTCGTGAAAAACAATAAAAACCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCT  >  NC_000913/4287586‑4287853

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: