New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 72193 =NA (NA)3 (0.030) 3/226 8.1 NA noncoding (29/34 nt) other REP7b
?NC_000913 = 4554510 NA (NA)noncoding (30/34 nt) other REP346
Rejected: Coverage evenness skew score above cutoff.

ATGCGGCGCGGATCGCCACGCGCTCGGTAGTAGTCGCCGACGGGCGCATCGCCTGGCAGGGTATGACCAATGAGTTGTTGAGCGGTAAGGCGAGTGCTTCGGCACTATTGGGGATTACGGGTTAGTATGCACTGTCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/72353‑72193
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggatgcggcgtgaacgccttatccgGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTGGAAGTTGGCACGTACAGGTGGGCAAAAAAACGAAAACTGGTCAACCAAATATCAGTTTGATTGACCAGTAAGTCTGTAGGG  <  NC_000913/4554510‑4554373
                                                                                                                                                                                                                                                                                                           
ATGCGGCGCGGATCGCCACGCGCTCGGTAGTAGTCGCCGACGGGCGCATCGCCTGGCAGGGTATGACCAATGAGTTGTTGAGCGGTAAGGCGAGTGCTTCGGCACTATTGGGGATTACGGGTTAGTATGCACTGTCGGAT                                                                                                                                                                 >  2:1552158/1‑140
  GCGGCGCGGATCGCCACGCGCTCGGTAGTAGTCGCCGACGGGCGCATCGCCTGGCAGGGTATGACCAATGAGTTGTTGAGCGGTAAGGCGAGTGCTTCGGCACTATTGGGGATTACGGGTTAGTATGCACTGTCGGATGC                                                                                                                                                               >  1:988625/1‑140
  GCGGCGCGGATCGCCACGCGCTCGGTAGTAGTCGCCGACGGGCGCATCGCCTGGCAGGGTATGACCAATGAGTTGTTGAGCGGTAAGGCGAGTGCTTCGGCACTATTGGGGATTACGGGTTAGTATGCACTGTCGGATGC                                                                                                                                                               >  1:1318771/1‑140
  GCGGCGCGGATCGCCACGCGCTCGGTAGTAGTCGCCGACGGGCGCATCGCCTGGCAGGGTATGACCAATGAGTTGTTGAGCGGTAAGGCGAGTGCTTCGGCACTATTGGGGATTACGGGTTAGTATGCACTGTCGGATGC                                                                                                                                                               >  1:220288/1‑140
    GGCGCGGATCGCCACGCGCTCGGTAGTAGTCGCCGACGGGCGCATCGCCTGGCAGGGTATGACCAATGAGTTGTTGAGCGGTAAGGCGAGTGCTTCGGCACTATTGGGGATTAGGGGTTAGTATGCACTGTCGGATGCGG                                                                                                                                                             >  2:204387/1‑140
     GCGCGGATCGCCACGCGCTCGGTAGTAGTCGCCGACGGGCGCATCGCCTGGCAGGGTATGACCAATGAGTTGTTGAGCGGTAAGGCGAGTGCTTCGGCACTATTGGGGATTACGGGTTAGTATGCACTGTCGGATGCGGC                                                                                                                                                            <  1:904464/140‑1
        CGGATCGCCACGCGCTCGGTAGTAGTCGCCGACGGGCGCATCGCCTGGCAGGGTATGACCAATGAGTTGTTGAGCGGTAAGGCGAGTGCTTCGGCACTATTGGGGATTACGGGTTAGTATGCACTGTCGGATGCGGCGTG                                                                                                                                                         <  2:68786/140‑1
        CGGATCGCCACGCGCTCGGTAGTAGTCGCCGACGGGCGCATCGCCTGGCAGGGTATGACCAATGAGTTGTTGAGCGGTAAGGCGAGTGCTTCGGCACTATTGGGGATTACGGGTTAGTATGCACTGTCGGATGCGGCGTG                                                                                                                                                         <  1:222639/140‑1
         GGATCGCCACGCGCTCGGTAGTAGTCGCCGACGGGCGCATCGCCTGGCAGGGTATGACCAATGAGTTGTTGAGCGGTAAGGCGAGTGCTTCGGCACTATTGGGGATTACGGGTTAGTATGCACTGTCGGATGCGGCGTGA                                                                                                                                                        <  1:246107/140‑1
         GGATCGCCACGCGCTCGGTAGTAGTCGCCGACGGGCGCATCGCCTGGCAGGGTATGACCAATGAGTTGTTGAGCGGTAAGGCGAGTGCTTCGGCACTATTGGGGATTACGGGTTAGTATGCACTGTCGGATGCGGCGTGA                                                                                                                                                        <  1:366900/140‑1
         GGATCGCCACGCGCTCGGTAGTAGTCGCCGACGGGCGCATCGCCTGGCAGGGTATGACCAATGAGTTGTTGAGCGGTAAGGCGAGTGCTTCGGCACTATTGGGGATTACGGGTTAGTATGCACTGTCGGATGCGGCGTGA                                                                                                                                                        <  2:482411/140‑1
         GGATCGCCACGCGCTCGGTAGTAGTCGCCGACGGGCGCATCGCCTGGCAGGGTATGACCAATGAGTTGTTGAGCGGTAAGGCGAGTGCTTCGGCACTATTGGGGATTACGGGTTAGTATGCACTGTCGGATGCGGCGTGA                                                                                                                                                        <  2:270323/140‑1
             CGCCACGCGCTCGGTAGTAGTCGCCGACGGGCGCATCGCCTGGCAGGGTATGACCAATGAGTTGTTGAGCGGTAAGGCGAGTGCTTCGGCACTATTGGGGATTACGGGTTAGTATGCACTGTCGGATGCGGCGTGAACGC                                                                                                                                                    <  1:217485/140‑1
                  CGCGCTCGGTAGTAGTCGCCGACGGGCGCATCGCCTGGCAGGGTATGACCAATGAGTTGTTGAGCGGTAAGGCGAGTGCTTCGGCACTATTGGGGATTACGGGTTAGTATGCACTGTCGGATGCGGCGTGAACGCCTTAT                                                                                                                                               <  1:36898/140‑1
                   GCGCTCGGTAGTAGTCGCCGACGGGCGCATCGCCTGGCAGGGTATGACCAATGAGTTGTTGAGCGGTAAGGCGAGTGCTTCGGCACTATTGGGGATTACGGGTTAGTATGCACTGTCGGATGCGGCGTGAACGCCTTATC                                                                                                                                              <  1:185289/140‑1
                    CGCTCGGTAGTAGTCGCCGACGGGCGCATCGCCTGGCAGGGTATGACCAATGAGTTGTTGAGCGGTAAGGCGAGTGCTTCGGCACTATTGGGGATTACGGGTTAGTATGCACTGTCGGATGCGGCGTGAACGCCTTATCC                                                                                                                                             <  1:1044921/140‑1
                       TCGATAGTAGTCGCCGACGGGCGCATCGCCTGGCAGGGTATGACCAATGAGTTGTTGAGCGGTAAGGCTAGTGCTTCGGCACTATTTGGGATTACGGGTTAGTATGCACTGTCGGATGCGGCGTGAACGCCTTATCCGGC                                                                                                                                          <  1:646591/140‑1
                                                                     ATGAGTTGTTGAGCGGTAAGGCGAGTGCTTCGGCACTATTGGGGATTACGGGTTAGTATGCACTGTCGGATGCGGCGTGAACGCCTTATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCA                                                                                            >  1:1249702/1‑140
                                                                                                        CTATTGGGGATTACGGGTTAGTATGCACTGTCGGATGCGGCGTGAACGCCTTATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTGGAAGTTGGCACGTACAGGTGGGCAAA                                                         <  2:1249702/140‑1
                                                                                                                                          ATGCGGCGTGAACGCCTTATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTGGAAGTTGGCACGTACAGGTGGGCAAAAAAACGAAAACTGGTCAACCAAATATCAGTTTGA                       <  2:1716787/140‑1
                                                                                                                                           TGCGGCGTGAACGCCTTATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTGGAAGTTGGCACGTACAGGTGGGCAAAAAAACGAAAACTGGTCAACCAAATATCAGTTTGAT                      <  2:1625403/140‑1
                                                                                                                                           TGCGGCGTGAACGCCTTATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTGGAAGTTGGCACGTACAGGTGGGCAAAAAAACGAAAACTGGTCAACCAAATATCAGTTTGAT                      <  2:522239/140‑1
                                                                                                                                           TGCGGCGTGAACGCCTTATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTGGAAGTTGGCACGTACAGGTGGGCAAAAAAACGAAAACTGGTCAACCAAATATCAGTTTGAT                      <  1:609871/140‑1
                                                                                                                                           TGCGGCGTGAACGCCTTATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTGGAAGTTGGCACGTACAGGTGGGCAAAAAAACGAAAACTGGTCAACCAAATATCAGTTTGAT                      <  2:1396561/140‑1
                                                                                                                                           TGCGGCGTGAACGCCTTATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTGGAAGTTGGCACGTACAGGTGGGCAAAAAAACGAAAACTGGTCAACCAAATATCAGTTTGAT                      <  1:762687/140‑1
                                                                                                                                             CGGCGTGAACGCCTTATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTGGAAGTTGGCACGTACAGGTGGGCAAAAAAACGAAAACTGGTCAACCAAATATCAGTTTGATTG                    <  2:165715/140‑1
                                                                                                                                                CGTGAACGCCTTATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTGGAAGTTGGCACGTACAGGTGGGCAAAAAAACGAAAACTGGTCAACCAAATATCAGTTTGATTGACC                 <  2:598220/140‑1
                                                                                                                                                CGTGAACGCCTTATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTGGAAGTTGGCACGTACAGGTGGGCAAAAAAACGAAAACTGGTCAACCAAATATCAGTTTGATTGACC                 <  2:503135/140‑1
                                                                                                                                                CGTGAACGCCTTATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTGGAAGTTGGCACGTACAGGTGGGCAAAAAAACGAAAACTGGTCAACCAAATATCAGTTTGATTGACC                 <  1:1455869/140‑1
                                                                                                                                                CGTGAACGCCTTATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTGGAAGTTGGCACGTACAGGTGGGCAAAAAAACGAAAACTGGTCAACCAAATATCAGTTTGATTGACC                 <  1:810434/140‑1
                                                                                                                                                  TGAACGCCTTATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTGGAAGTTGGCACGTACAGGTGGGCAAAAAAACGAAAACTGGTCAACCAAATATCAGTTTGATTGACCAG               <  2:432812/140‑1
                                                                                                                                                   GAACGCCTTATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTGGAAGTTGGCACGTACAGGTGGGCAAAAAAACGAAAACTGGTCAACCAAATATCAGTTTGATTGACCAGT              <  1:1138938/140‑1
                                                                                                                                                    AACGCCTTATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTGGAAGTTGGCACGTACAGGTGGGCAAAAAAACGAAAACTGGTCAACCAAATATCAGTTTGATTGACCAGTA             >  1:1761892/1‑140
                                                                                                                                                    AACGCCTTATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTGGAAGTTGGCACGTACAGGTGGGCAAAAAAACGAAAACTGGTCAACCAAATATCAGTTTGATTGACCAGTA             <  2:1045765/140‑1
                                                                                                                                                     ACGCCTTATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTGGAAGTTGGCACGTACAGGTGGGCAAAAAAACGAAAACTGGTCAACCAAATATCAGTTTGATTGACCAGTAA            <  1:97861/140‑1
                                                                                                                                                     ACGCCTTATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTGGAAGTTGGCACGTACAGGTGGGCAAAAAAACGAAAACTGGTCAACCAAATATCAGTTTGATTGACCAGTAA            <  1:47480/140‑1
                                                                                                                                                       GCCTTATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTGGAAGTTGGCACGTACAGGTGGGCAAAAAAACGAAAACTGGTCAACCAAATATCAGTTTGATTGACCAGTAAGT          <  2:1370604/140‑1
                                                                                                                                                         CTTATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTGGAAGTTGGCACGTACAGGTGGGCAAAAAAACGAAAACTGGTCAACCAAATATCAGTTTGATTGACCAGTAAGTCT        <  2:1677149/140‑1
                                                                                                                                                         CTTATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTGGAAGTTGGCACGTACAGGTGGGCAAAAAAACGAAAACTGGTCAACCAAATATCAGTTTGATTGACCAGTAAGTCT        <  1:587334/140‑1
                                                                                                                                                         CTTATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTGGAAGTTGGCACGTACAGGTGGGCAAAAAAACGAAAACTGGTCAACCAAATATCAGTTTGATTGACCAGTAAGTCT        <  2:1101629/140‑1
                                                                                                                                                           TATCCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTGGAAGTTGGCACGTACAGGTGGGCAAAAAAACGAAAACTGGTCAACCAAATATCAGTTTGATTGACCAGTAAGTCTGT      <  2:64698/140‑1
                                                                                                                                                              CCGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTGGAAGTTGGCACGTACAGGTGGGCAAAAAAACGAAAACTGGTCAACCAAATATCAGTTTGATTGACCAGTAAGTCTGTAGG   <  2:1227572/140‑1
                                                                                                                                                               CGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTGGAAGTTGGCACGTACAGGTGGGCAAAAAAACGAAAACTGGTCAACCAAATATCAGTTTGATTGACCAGTAAGTCTGTAGGG  <  1:1149486/140‑1
                                                                                                                                                               CGGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTGGAAGTTGGCACGTACAGGTGGGCAAAAAAACGAAAACTGGTCAACCAAATATCAGTTTGATTGACCAGTAAGTCTGTAGGG  <  2:631852/140‑1
                                                                                                                                                                                                                                                                                                           
ATGCGGCGCGGATCGCCACGCGCTCGGTAGTAGTCGCCGACGGGCGCATCGCCTGGCAGGGTATGACCAATGAGTTGTTGAGCGGTAAGGCGAGTGCTTCGGCACTATTGGGGATTACGGGTTAGTATGCACTGTCGGATGCGGCGTGAACGCCTTATCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/72353‑72193
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggatgcggcgtgaacgccttatccgGCCTACAACGGGCAATTTTACGGCCCCCGTTAATCTCAAACTATACCATTAGCACTGGAAGTTGGCACGTACAGGTGGGCAAAAAAACGAAAACTGGTCAACCAAATATCAGTTTGATTGACCAGTAAGTCTGTAGGG  <  NC_000913/4554510‑4554373

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.