| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,565,621 | 0 | T | G | 23.8% | 168.2 / 13.2 | 80 | N38T (AAC→ACC) | dosP | oxygen‑sensing c‑di‑GMP phosphodiesterase DosP |
| Reads supporting (aligned to +/- strand): ref base T (29/32); new base G (19/0); total (48/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.95e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
AACACGCGCTTTACCGCCTTCACGGTTGTGACGAATGTATTCAGGATGCGCAGGACGCAAATCCCGCGGAATCAGCATATCAATGTTATTGCCAATGACTTCTTCACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGTTGAAAAACATCACTTCATCATTTTCGTTAATTAACACCGCACCCATCATATTTTGCTCAAGGGCGGGGAAAAAAATGCCATCGGCGGCATTATCCGCATCGGTTAGCTTCATGATTACCTCTGCATCCTGGCGCATC > NC_000913/1565482‑1565758 | aaCACGCGCTTTACCGCCTTCACGGTTGTGACGAATGTATTCAGGATGCGCAGGACGCAAATCCCGCGGAATCAGCATATCAATGTTATTGCCAATGACTTCTTCACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGt > 2:1353035/1‑140 (MQ=255) tgcggTTTACCGCCTTCACGCTTGCGACGAATGTTTTTATGATGCGCAGGACGCAAATCCCTCGGGGTCATCGTAACAATGTTATTGCCAATGACTTCTTCACGTTTTTATCCCTCGAGCTTCTCTGCGGCGGGGtcgtt > 2:1396891/2‑136 (MQ=255) cgcgCTTTACCGCCTTCACGGTTGTGACGAATGTATTCAGGATGCGCAGGACGCAAATCCCGCGGAATCAGCATATCAATGTTATTGCCAATGACTTCTTCACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGTTGaa > 1:965995/1‑140 (MQ=255) gcTTTACCGCCTTCACGGTTGTGACGAATGTATTCAGGATGCGCAGGACGCAAATCCCGCGGAATCAGCATATCAATGTTATTGCCAATGACTTCTTCACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGTTGaaaaa > 2:569356/1‑140 (MQ=255) gcTTTACCGCCTTCACGGTTGTGACGAATGTATTCAGGATGCGCAGGACGCAAATCCCGCGGAATCAGCATATCAATGTTATTGCCAATGACTTCTTCACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGTTGaaaaa > 1:117372/1‑140 (MQ=255) gcTTTACCGCCTTCACGGTTGTGACGAATGTATTCAGGATGCGCAGGACGCAAATCCCGCGGAATCAGCATATCAATGTTATTGCCAATGACTTCTTCACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGTTGaaaaa > 2:611857/1‑140 (MQ=255) cTTTACCGCCTTCACGGTTGTGACGAATGTATTCAGGATGCGCAGGACGCAAATCCCGCGGAATCAGCATATCAATGTTATTGCCAATGACTTCTTCACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGTTGaaaaaa > 1:1678616/1‑139 (MQ=255) tACCGCCTTCACGGTTGTGACGAATGTATTCAGGATGCGCAGGACGCAAATCCCGCGGAATCAGCATATCAATGTTATTGCCAATGACTTCTTCACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGTTGAAAAACATc < 1:818804/140‑1 (MQ=255) ccGCCTTCACGGTTGTGACGAATGTATTCAGGATGCGCAGGACGCAAATCCCGCGGAATCAGCATATCAATGTTATTGCCAATGACTTCTTCACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGTTGAAAAACATCAc < 1:611857/140‑1 (MQ=255) ccGCCTTCACGGTTGTGACGAATGTATTCAGGATGCGCAGGACGCAAATCCCGCGGAATCAGCATATCAATGTTATTGCCAATGACTTCTTCACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGTTGAAAAACATCAc < 1:569356/140‑1 (MQ=255) cTTCACGGTTGTGACGAATGTATTCAGGATGCGCAGGACGCAAATCCCGCGGAATCAGCATATCAATGTTATTGCCAATGACTTCTTCACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGGTTTAAAAGATCACTtct > 2:560971/1‑139 (MQ=255) cTTCACGGTTGTGACGAATGTATTCAGGATGCGCAGGACGCAAATCCCGCGGAATCAGCATATCAATGTTATTGCCAATGACTTCTTCACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGGTGAAAAACATCACTtca > 1:421359/1‑140 (MQ=255) tCACGGTTGTGACGAATGTATTCAGGATGCGCAGGACGCAAATCCCGCGGAATCAGCATATCAATGTTATTGCCAATGACTTCTTCACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGTTGAAAAACATCACTtcatc > 1:88956/1‑140 (MQ=255) tCACGGTTGTGACGAATGTATTCAGGATGCGCAGGACGCAAATCCCGCGGAATCAGCATATCAATGTTATTGCCAATGACTTCTTCACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGTTGAAAAACATCACTtcatc > 1:329137/1‑140 (MQ=255) aCGGTTGTGACGAATGTATTCAGGATGCGCAGGACGCAAATCCCGCGGAATCAGCATATCAATGTTATTGCCAATGACTTCTTCACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGTTGAAAAACATCAcatcatcat > 2:1161071/1‑140 (MQ=255) aCGGTTGTGACGAATGTATTCAGGATGCGCAGGACGCAAATCCCGCGGAATCAGCATATCAATGTTATTGCCAATGACTTCTTCACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGGTGAAAAAAATCACTTtattat > 2:1702227/1‑140 (MQ=255) tgtgACGAATGTATTCAGGATGCGCAGGACGCAAATCCCGCGGAATCAGCATATCAATGTTATTGCCAATGACTTCTTCACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGTTGAAAAACATCACTTCATCATTTTCg < 1:1411807/140‑1 (MQ=255) tgtgACGAATGTATTCAGGATGCGCAGGACGCAAATCCCGCGGAATCAGCATATCAATGTTATTGCCAATGACTTCTTCACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGTTGAAAAACATCACTTCATCATTTTCg < 1:152790/140‑1 (MQ=255) tgtgACGAATGTATTCAGGATGCGCAGGACGCAAATCCCGCGGAATCAGCATATCAATGTTATTGCCAATGACTTCTTCACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGTTGAAAAACATCACTTCATCATTTTCg < 1:1256212/140‑1 (MQ=255) gtgACGAATGTATTCAGGATGCGCAGGACGCAAATCCCGCGGAATCAGCATATCAATGTTATTGCCAATGACTTCTTCACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGTTGAAAAACATCACTTCATCATTTTCGt > 1:823698/1‑140 (MQ=255) tgACGAATGTATTCAGGATGCGCAGGACGCAAATCCCGCGGAATCAGCATATCAATGTTATTGCCAATGACTTCTTCACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGTTTAAAAAAAACACTTTAAATTTTTCGtt > 2:1577744/1‑140 (MQ=255) tgACGAATGTATTCAGGATGCGCAGGACGCAAATCCCGCGGAATCAGCATATCAATGTTATTGCCAATGACTTCTTCACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGTTGAAAAACATCACTTCATCATTTTCGtt < 1:652436/140‑1 (MQ=255) aCGAATGTATTCAGGATGCGCAGGACGCAAATCCCGCGGAATCAGCATATCAATGTTATTGCCAATGACTTCTTCACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGTTGAAAAAAATCACTTCATCATTTTCGttaa > 2:520522/1‑140 (MQ=255) tGTATTCAGGATGCGCAGGACGCAAATCCCGCGGAATCAGCATATCAATGTTATTGCCAATGACTTCTTCACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGTTGAAAAACATCACTTCATCATTTTCGTTAATTAac > 1:1385793/1‑140 (MQ=255) tGTATTCAGGATGCGCAGGACGCAAATCCCGCGGAATCAGCATATCAATGTTATTGCCAATGACTTCTTCACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGTTGAAAAAAATCACTTCATCATTTTCGttaattaaa > 1:1748145/1‑139 (MQ=255) tATTCAGGATGCGCAGGACGCAAATCCCGCGGAATCAGCATATCAATGTTATTGCCAATGACTTCTTCACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGTTGAAAAACATCACTTCATCATTTTCGTTAATTAacac > 1:1392477/1‑140 (MQ=255) ttCAGGATGCGCAGGACGCAAATCCCGCGGAATCAGCATATCAATGTTATTGCCAATGACTTCTTCACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGTTGAAAAACATCACTTCATCATTTTCGTTAATTAACACCg < 1:1445911/140‑1 (MQ=255) cAGGATGCGCAGGACGCAAATCCCGCGGAATCAGCATATCAATGTTATTGCCAATGACTTCTTCACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGTTGAAAAACATCACTTCATCATTTTCGTTAATTAACACCGCa < 2:378411/140‑1 (MQ=255) aGGATGCGCAGGACGCAAATCCCGCGGAATCAGCATATCAATGTTATTGCCAATGACTTCTTCACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGTTGAAAAACATCACTTCATCATTTTCGTTAATTAACACCGCAc < 1:520522/140‑1 (MQ=255) gATGCGCAGGACGCAAATCCCGCGGAATCAGCATATCAATGTTATTGCCAATGACTTCTTCACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGGTGAAAAACATCACTTCATCATTTTCGTTAATTAAcaccccaccc > 1:943865/1‑140 (MQ=255) gATGCGCAGGACGCAAATCCCGCGGAATCAGCATATCAATGTTATTGCCAATGACTTCTTCACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGGTGAAAAAAATCACTTCATCATTTTTGTTAATTAAAACCGCAccc > 2:681722/1‑140 (MQ=255) gcgcAGGACGCAAATCCCGCGGAATCAGCATATCAATGTTATTGCCAATGACTTCTTCACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGTTGAAAAACATCACTTCATCATTTTCGTTAATTAACACCGCACCcatc > 1:298380/1‑140 (MQ=255) cgcAGGACGCAAATCCCGCGGAATCAGCATATCAATGTTATTGCCAATGACTTCTTCACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGGTGAAAAAAATCCCTTCACCATTTTCGTTAATTAAAACCCGCCCcatca > 1:1219832/1‑140 (MQ=255) cAGGACGCAAATCCCGCGGAATCAGCATATCAATGTTATTGCCAATGACTTCTTCACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGTTGAAAAACATCACTTCATCATTTTCGTTTATTAACACCGCCCCCATCata > 1:1292628/1‑140 (MQ=255) ggACGCAAATCCCGCGGAATCAGCATATCAATGTTATTGCCAATGACTTCTTCACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGTTGAAAAACATCACTTCATCATTTTCGTTAATTAACACCGCACCCATCATAtt < 2:421359/140‑1 (MQ=255) ggACGCAAATCCCGCGGAATCAGCATATCAATGTTATTGCCAATGACTTCTTCACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGTTGAAAAACATCACATCATCATTTTCGTTAATTAACACCGCACCCATCATAtt < 1:1161071/140‑1 (MQ=255) aCGCAAATCCCGCGGAATCAGCATATCAATGTTATTGCCAATGACTTCTTCACGTTTGTATCCCCAGAGCTTCTCTGCGGGGGGGTTGAAAAACATCACTTCATCATTTTCGTTAATTAACACCGCACCCATCATAtttt > 1:639426/1‑140 (MQ=255) cGCAAATCCCGCGGAATCAGCATATCAATGTTATTGCCAATGACTTCTTCACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGGTGAAAAACATCACTTCATCATTTTCGTTAATTAACACCGCACCCATCATAttttt > 1:36059/1‑139 (MQ=255) aaTCCCGCGGAATCAGCATATCAATGTTATTGCCAATGACTTCTTCACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGTTGAAAAACATCACTTCATCATTTTCGTTAATTAACACCGCACCCATCATATTTTGCTCa < 1:301302/140‑1 (MQ=255) aTCAGCATATCAATGTTATTGCCAATGACTTCTTCACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGTTGAAAAACATCACTTCATCATTTTCGTTAATTAACACCGCACCCATCATATTTTGCTCAAGGGCGGGGaa > 1:1149540/1‑140 (MQ=255) gTTATTGCCAATGACTTCTTCACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGTTGAAAAACATCACTTCATCATTTTCGTTAATTAACACCGCACCCATCATATTTTGCTCAAGGGCGGGGAAAAAAATGCCATcgg < 2:304668/140‑1 (MQ=255) aTTGCCAATGACTTCTTCACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGTTGAAAAACATCACTTCATCATTTTCGTTAATTAACACCGCACCCATCATATTTTGCTCAAGGGCGGGGAAAAAAATGCCATcggcgg < 2:1392477/140‑1 (MQ=255) ttGCCAATGACTTCTTCACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGTTGAAAAACATCACTTCATCATTTTCGTTAATTAACACCGCACCCATCATATTTTGCTCAAGGGCGGGGAAAAAAATGCCATCggcggc < 1:1101570/140‑1 (MQ=255) ttGCCAATGACTTCTTCACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGGTGAAAAACATCACTTCATCATTTTCGTTAATTAACACCGCACCCATCATATTTTGCTCAAGGGCGGGGAAAAAAATGCCATcggcggg > 1:410949/1‑139 (MQ=255) tGCCAATGACTTCTTCACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGTTGAAAAACATCACTTCATCATTTTCGTTAATTAACACCGCACCCATCATATTTTGCTCAAGGGCGGGGAAAAAAATGCCATCGGCGGCa > 1:240903/1‑140 (MQ=255) tGCCAATGACTTCTTCACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGTTGAAAAACATCACTTCATCATTTTCGTTAATTAACACCGCACCCATCATATTTTGCTCAAGGGCGGGGAAAAAAATGCCATCGGCGGCa > 1:1659435/1‑140 (MQ=255) gCCAATGACTTCTTCACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGGTGAAAAAAATCACTTCATCATTTTTGTTAATTAACACCGCACCCATCATATTTTTCTCAAAGGCGGGGAAAAAAAAGCCATCggcggcct > 2:306558/1‑138 (MQ=255) gCCAATGACTTCTTCACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGCTGAAAAACATCCATTCATCCTTTTTGTTAATTAACACCGCCCCCAACATATTTTGTCCCAGGGGGGGGGAAAAAAAGCCATccgcgggct > 2:676857/1‑137 (MQ=255) aaTGACTTCTTCACGTTTGTATCCCCAGAGCTTCTCTGCGGGGGGGTTGAAAAACATCACTTCATCATTTTCGTTAATTAACACCGCACCCATCATATTTTGCTCAAGGGCGGGGAAAAAAATGCCATTGGCGGCATTAt < 2:639426/140‑1 (MQ=255) aaTGACTTCTTCACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGTTGAAAAACATCACTTCATCATTTTCGTTAATTAACACCGCACCCATCATATTTTGCTCAAGGGCGGGGAAAAAAATGCCATCGGCGGCATTAt > 1:318270/1‑140 (MQ=255) aaTGACTTCTTCACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGGTTGAAAACATCACTTCATCATTTTCATTAAATAACACCGCACCCAACATATTTTTCTCAAGGGCGGGGGAAAAAAAACCCTccgcgggcattt > 2:1707255/1‑134 (MQ=255) aaTGACTTCTTCACGTTTGTATCACCAGAGCTTCTCTGCGGCGGGGTTGAAAAACATCACTTCATCATTTTCGTTAATTAACACCGCACCCATCATATTTTGCTCAAGGGCGGGGGAAAAAAAGCCATCGGCGGCAtttt > 2:369309/1‑138 (MQ=255) aTGACTTCTTCACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGTTGAAAAACATCACTTCATCATTTTCGTTAATTAACACCGCACCCATCATATTTTGCTCAAGGGCGGGGAAAAAAATGCCATCGGCGGCATTATc > 1:738779/1‑140 (MQ=255) tGACTTCTTCACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGGTGAAAAACATCACTTCATCATTTTCGTTAATTAACACCGCACCCATCATATTTTGCTCAAGGGCGGGGAAAAAAATGCCATCGGCGGCATTATcc > 1:960465/1‑140 (MQ=255) cttcttCACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGTTGAAAAACATCCCTTCATCATTTTTGTTAATTAACACCGCCCCCATCATATTTTGCTCAAGGGCGGGGGAAAAAAAGCCCTCGGGGGCCTTTTCCGcc > 2:974918/1‑139 (MQ=255) cttcttCACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGTTGAAAAACATCACTTCATCATTTTCGTTAATTAACACCGCACCCATCATATTTTGCTCAAGGGCGGGGAAAAAAATGCCATCGGCGGCATTATCCGCa < 1:681722/140‑1 (MQ=255) cttcttCACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGTTGAAAAACATCACTTCATCATTTTCGTTAATTAACACCGCACCCATCATATTTTGCTCAAGGGCGGGGAAAAAAATGCCATCGGCGGCATTATCCGCa < 2:1149540/140‑1 (MQ=255) cttcACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGTTGAAAAACATCACTTCATCATTTTCGTTAATTAACACCGCACCCATCATATTTTGCTCAAGGGCGGGGAAAAAAATGCCATCGGCGGCATTATTCCCATCg > 1:1607902/1‑140 (MQ=255) cttcACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGGTGAAAAACATCACTTCATCATTTTCGTTAATTAACACCGCACCCATCATATTTTTCTCAAGGGCGGGGGAAAAAAAGCCATCGGCGGCATTATCCCCATCg > 2:1311620/1‑140 (MQ=255) cttcACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGGTGAAAAACATCACTTCATCATTTTCGTTAATTAACACCGCACCCATCATATTTTGCTCAAGGGCGGGGAAAAAAATGCCATCGGCGGCATTATCCGCATCg > 1:31162/1‑140 (MQ=255) tcACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGTTGAAAAACATCACTTCATCATTTTCGTTAATTAACACCGCACCCATCATATTTTGCTCAAGGGCGGGGAAAAAAATGCCATCGGCGGCATTATCCGCATCGGt < 1:1311620/140‑1 (MQ=255) tcACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGTTGAAAAACATCACTTCATCATTTTCGTTAATTAACACCGCACCCATCATATTTTGCTCAAGGGCGGGGAAAAAAATGCCATCGGCGGCATTATCCGCATCGGt < 2:1748145/140‑1 (MQ=255) tttGTATCCCCAGAGCTTCTCTGCGGCGGGGTTGAAAAACATCACTTCATCATTTTCGTTAATTAACACCGCACCCATCATATTTTGCTCAAGGGCGGGGAAAAAAATGCCATCGGCGGCATTATCCGCATCGGTTAGCt < 1:862716/140‑1 (MQ=255) tttGTATCACCAGAGCTTCTCTGCGGCGGGGTTGAAAAACATCACTTCATCATTTTCGTTAATTAACACCGCACCCATCATATTTTGCTCAAGGGCGGGGAAAAAAATGCCATCGGCGGCATTATCCGCATCGGTTAGCt < 1:369309/140‑1 (MQ=255) tATCCCCAGAGCTTCTCTGCGGCGGGGTTGAAAAACATCACTTTATCATTTTCGTTAATTAACACCGCACCCCTCATATTTTGCTCAAGGGCGGGGAAAAAAAAGCCATCGGCGGCCTTATTCGCCTCGGGTTGCtttct > 2:358913/1‑137 (MQ=255) tATCCCCAGAGCTTCTCTGCGGCGGGGTTGAAAAACATCACTTCATCATTTTCGTTAATTAACACCGCACCCATCATATTTTGCTCAAGGGCGGGGAAAAAAATGCCATCGGCGGCATTATCCGCATCGGTTAGCTTCAt > 1:563339/1‑140 (MQ=255) tATCCCCAGAGCTTCTCTGCGGCGGGGTTGAAAAACATCACTTCATCATTTTCGTTAATTAACACCGCACCCATCATATTTTGCTCAAGGGCGGGGAAAAAAATGCCATCGGCGGCATTATCCGCATCGGGTAGCTTCAt > 1:530887/1‑140 (MQ=255) ccccAGAGCTTCTCTGCGGCGGGGTTGAAAAACATCACTTCATCATTTTCGTTAATTAACACCGCACCCATCATATTTTGCTCAAGGGCGGGGAAAAAAATGCCATCGGCGGCATTATCCGCATCGGTTAGCTTCATGAt < 2:1724240/140‑1 (MQ=255) ccccAGAGCTTCTCTGCGGCGGGGTTGAAAAACATCACTTCATCATTTTCGTTAATTAACACCGCACCCATCATATTTTGCTCAAGGGCGGGGAAAAAAATGCCATCGGCGGCATTATCCGCATCGGTTAGCTTCATGAt < 2:117372/140‑1 (MQ=255) cccAGAGCTTCTCTGCGGCGGGGTTGAAAAACATCACTTCATCATTTTCGTTAATTAACACCGCACCCATCATATTTTGCTCAAGGGCGGGGAAAAAAATGCCATCGGCGGCATTATCCGCATCGGTTAGCTTCATGAtt < 2:298380/140‑1 (MQ=255) cccAGAGCTTCTCTGCGGCGGGGTTGAAAAACATCACTTCATCATTTTCGTTAATTAACACCGCACCCATCATATTTTGCTCAAGGGCGGGGAAAAAAATGCCATCGGCGGCATTATCCGCATCGGTTAGCTTCATGAtt < 2:965995/140‑1 (MQ=255) ccAGAGCTTCTCTGCGGCGGGGTTGAAAAACATCACTTCATCATTTTCGTTAATTAACACCGCACCCATCATATTTTGCTCAAGGGCGGGGAAAAAAATGCCATCGGCGGCATTATCCGCATCGGTTAGCTTCATGATTa < 2:240903/140‑1 (MQ=255) ccAGAGCTTCTCTGCGGCGGGGTTGAAAAACATCACTTCATCATTTTCGTTAATTAACACCGCACCCATCATATTTTGCTCAAGGGCGGGGAAAAAAATGCCATCGGCGGCATTATCCGCATCGGTTAGCTTCATGATTa < 2:454222/140‑1 (MQ=255) agagCTTCTCTGCGGCGGGGGTGAAAAACATCACTTCATCATTTTCGTTAATTAACACCGCACCCCTCATATTTTGCTCAAAGGCGGGGAAAAAAATGCCATCGGCGGCATTATTCCCATCGGGTAGCCTCATGGTTAcc > 1:143365/1‑140 (MQ=255) agCTTCTCTGCGGCGGGGTTGAAAAACATCACTTCATCATTTTCGTTAATTAACACCGCACCCATCATATTTTGCTCAAAGGCGGGGAAAAAAATGCCCTCGGCGGCCTTATCCGCATCGGTTAGCTTCATGATTACctc > 1:209048/1‑140 (MQ=255) agCTTCTCTGCGGCGGGGGTGAAAAACATCACTTCATCATTTTCGGTAATTAACACCGCACCCATCATATTTTGCTCAAAGGCGGGGGAAAAAAAGCCATCGGCGGGAATATCCGCCTCGGGTAGCCTCAAGATTAActc > 2:373143/1‑140 (MQ=255) gCTTCTCTGCGGCGGGGTTGAAAAACATCACTTCATCATTTTCGTTAATTAACACCGCACCCATCATATTTTGCTCAAGGGCGGGGAAAAAAATGCCATCGGCGGCATTATCCGCATCGGTTAGCTTCATGATTACctct < 1:1273348/140‑1 (MQ=255) gCTTCTCTGCGGCGGGGTTGAAAAACATCACTTCATCATTTTCGTTAATTAACACCGCACCCATCATATTTTGCTCAAGGGCGGGGAAAAAAAAGCCATCGGCGGGATTATCCGCATCGGGTTGCTTCATGATTACctct > 2:326480/1‑140 (MQ=255) gCTTCTCTGCGGCGGGGGTGAAAAAAATCACTTCATCATTTTCGTTAATTAACACCGCACCCATCATATTTTGCTCAAGGGCGGGGAAAAAAAAGCCATCGGCGGCATTATCCCCATCGGTTAGCTTCATGATTAActct > 2:546826/1‑140 (MQ=255) ttCTCTGCGGCGGGGTTGAAAAACATCACTTCATCATTTTCGTTAATTAACACCGCACCCATCATATTTTTCTCAAGGGCGGGGAAAAAAATGCCATCGGCGGCATTATCCGCATCGGTTAGCTTCATGATTACCTCTGc > 1:703203/1‑140 (MQ=255) tctcTGCGGCGGGGGTGAAAAACATCACTTCATCATTTTCGTTAATTAACACCGCACCCATCATATTTTGCTCAAGGGCGGGGAAAAAAATGCCATCGGCGGCATTATCCGCATCGGGTAGCTTTATGATTACCTCTGcc > 2:1427757/1‑139 (MQ=255) tctcTGCGGCGGGGGTGAAAAAAATCACTTCATCATTTTCGTTAATTAACACCGCACCCATCATATTTTGCTCAAGGGCGGGGAAAAAAATGCCATCGGCGGCATTATCCCCCTCGGGTTGCTTTATGATTACCTCTGCa > 2:1428511/1‑140 (MQ=255) ctctGCGGCGGGGTTGAAAAACATCACTTCATCATTTTCGTTAATTAACACCGCACCCATCATATTTTGCTCAAGGGCGGGGAAAAAAATGCCATCGGCGGCATTATCCGCATCGGTTAGCTTCATGATTACCTCTGCAt < 2:329137/140‑1 (MQ=255) ctctGCGGCGGGGGTGAAAAACATCACTTCATCATTTTCGTTAATTAACACCGCACCCATCATATTTTTCTCAAGGGCGGGGGAAAAAATGCCATCGGCGGCATTATTCGCCTCGGTTAGCTTCATGATTAACTCTGCAt > 2:903253/1‑140 (MQ=255) ctctGCGGCGGGGGTGAAAAAAATCACTTCATCATTTTCGTTAATTAACACCGCACCCATCATATTTTGCTCAAGGGCGGGGGAAAAAAAGCCATCGGCGGCATTATCCGCATCCGTTTGCTTTATGATTACCTCTTCAt > 2:1027608/1‑140 (MQ=255) cggcggGGGTGAAAAACATCACTTCATCATTTTCGTTAATTAACACCGCACCCATCATATTTTGCTCAAGGGCGGGGAAAAAAATGCCATCGGCGGCCTTATTCGCATCGGTTAGCTTCATGATTACCTCTGCATCCTgg > 2:1715997/1‑140 (MQ=255) ggTTGAAAAACATCACTTCATCATTTTCGTTAATTAACACCGCACCCATCATATTTTGCTCAAGGGCGGGGAAAAAAATGCCATCGGCGGCATTATCCGCATCGGTTAGCTTCATGATTACCTCTGCATCCTGGCGCATc < 1:546826/140‑1 (MQ=255) | AACACGCGCTTTACCGCCTTCACGGTTGTGACGAATGTATTCAGGATGCGCAGGACGCAAATCCCGCGGAATCAGCATATCAATGTTATTGCCAATGACTTCTTCACGTTTGTATCCCCAGAGCTTCTCTGCGGCGGGGTTGAAAAACATCACTTCATCATTTTCGTTAATTAACACCGCACCCATCATATTTTGCTCAAGGGCGGGGAAAAAAATGCCATCGGCGGCATTATCCGCATCGGTTAGCTTCATGATTACCTCTGCATCCTGGCGCATC > NC_000913/1565482‑1565758 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |