Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,206,4440TA24.1% 123.2 / 17.6 58intergenic (‑188/‑19)ttdR/ttdADNA‑binding transcriptional activator Dan/L(+)‑tartrate dehydratase subunit alpha
Reads supporting (aligned to +/- strand):  ref base T (4/40);  new base A (14/0);  total (18/40)
Fisher's exact test for biased strand distribution p-value = 3.02e-10
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

CCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTA  >  NC_000913/3206312‑3206582
                                                                                                                                    |                                                                                                                                          
cccTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACTTTTTTGGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACaaaaa                                                                                                                                     <  2:563397/140‑1 (MQ=255)
cccTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAaaaaaaaaaa                                                                                                                                     >  1:609215/1‑140 (MQ=255)
cccTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAATACaaaaa                                                                                                                                     >  2:574277/1‑140 (MQ=255)
  cTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGGATTTTTTCAGACAAATAaaaaaaaa                                                                                                                                   >  2:1137656/1‑138 (MQ=255)
   tGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAAACACAaaaaaaaaata                                                                                                                                  >  2:449643/1‑137 (MQ=255)
    gCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTgg                                                                                                                                 <  1:695211/140‑1 (MQ=255)
     ctctGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTTTGACAAAAAAAAAAAATGGa                                                                                                                                >  2:112920/1‑140 (MQ=255)
      tctGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTCCATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAg                                                                                                                               <  2:1631743/140‑1 (MQ=255)
      tctGGCGCAATATTCATTCTTATTTTCGCGTTAATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAg                                                                                                                               <  2:403154/140‑1 (MQ=255)
          gcgcAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCCGACAAATACAAAAAAAGGAGTTgg                                                                                                                           >  1:996004/1‑139 (MQ=255)
          gcgcAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAATAAAAAAAAAGGAGTTGc                                                                                                                           >  2:1677334/1‑140 (MQ=255)
           cgcAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAAAACAAAAAATGGAGGTggc                                                                                                                          >  1:127640/1‑138 (MQ=255)
              aaTATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCatg                                                                                                                       <  2:577803/140‑1 (MQ=255)
              aaTATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCatg                                                                                                                       <  1:851391/140‑1 (MQ=255)
                    cattcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGc                                                                                                                 <  2:225073/140‑1 (MQ=255)
                     attcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATAC‑AAAACTGGAGTTGCCATGATGAGCGa                                                                                                               <  1:370882/140‑1 (MQ=255)
                      ttcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGa                                                                                                               <  2:300124/140‑1 (MQ=255)
                      ttcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGa                                                                                                               <  2:1287021/140‑1 (MQ=255)
                      ttcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGa                                                                                                               <  2:224791/140‑1 (MQ=255)
                      ttcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGa                                                                                                               <  1:727987/140‑1 (MQ=255)
                      ttcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGa                                                                                                               <  1:480715/140‑1 (MQ=255)
                      ttcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGa                                                                                                               <  2:287830/140‑1 (MQ=255)
                      ttcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGa                                                                                                               <  1:125190/140‑1 (MQ=255)
                          tATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTTAGACAAATAAAAAAAATTGAGTTGCCATGATGAGCGGAAGt                                                                                                           >  2:1202739/1‑140 (MQ=255)
                          tATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCCGACAAAAACAAAAAATGGAGTTTCCGTGAGGAGCGcaaaa                                                                                                           >  1:632427/1‑138 (MQ=255)
                          tATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAAATTTTTCACAAAAAAAAAAAAAAAGGAGGTGGCCTTATGAGGGGAAga                                                                                                           >  2:706844/1‑139 (MQ=255)
                           aTTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAAAACAAAAAATGGAGGTGCCATGATGAGCGGAAGta                                                                                                          >  1:531123/1‑140 (MQ=255)
                           aTTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGta                                                                                                          <  2:1399263/140‑1 (MQ=255)
                            ttttCGCGTTGATTCATGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAAAAAAAAAAATGGAGGTGCCCTGATGAGCGaaaaaaa                                                                                                         >  1:506554/1‑136 (MQ=255)
                            ttttCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGGATTTTTTCAGACAAAAAAAAAAAATTGAGGTGCCATGATGAGGGGAAGaaa                                                                                                         >  1:570487/1‑140 (MQ=255)
                            ttttCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCCGACAAAAAAAAAAAAAGGAGGTGCCATGATGAGGgaaagaaa                                                                                                         >  1:201399/1‑140 (MQ=255)
                            ttttCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAATAAAAAAAATGGAGTTGCCATGATGAGCGGAAGaaa                                                                                                         >  1:1124005/1‑140 (MQ=255)
                             tttCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGtaat                                                                                                        <  1:234356/140‑1 (MQ=255)
                                   gTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCaa                                                                                                  <  2:921014/140‑1 (MQ=255)
                                    ttGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAAc                                                                                                 <  2:520280/140‑1 (MQ=255)
                                       aTTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAgg                                                                                              <  2:184538/140‑1 (MQ=255)
                                       aTTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAgg                                                                                              <  1:904123/140‑1 (MQ=255)
                                              aaCTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGaa                                                                                       <  1:669968/140‑1 (MQ=255)
                                               aCTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAAt                                                                                      <  1:1372881/140‑1 (MQ=255)
                                                cTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATa                                                                                     <  1:112920/140‑1 (MQ=255)
                                                    tAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGtt                                                                                 <  1:1617652/140‑1 (MQ=255)
                                                           atatTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCCAAAAAAAAAAAAAAATTGAGGTGGCATGATGAGGGAAAAGAATAAACAAAAAGCAGAGAAAAAGTTTGCagag                                                                          >  2:587401/1‑140 (MQ=255)
                                                            tatTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAgaga                                                                         <  1:449643/140‑1 (MQ=255)
                                                            tatTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAgaga                                                                         <  2:788093/140‑1 (MQ=255)
                                                             atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTTAAACAAAAAAAAAAAATGGAGGTGGCATGATGGGCGAAAGAAATAAACAAAAAGCAGGGAAAAAAATGACAgagaa                                                                        >  2:982712/1‑139 (MQ=255)
                                                             atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCCAACAAAAAAAAAAAATGGGGGTGCCATGATGGGGGAAAAAAAAAAAAAAAAAGAAGTGAATAAAATGAAAAAGAt                                                                        >  2:1597290/1‑140 (MQ=255)
                                                             atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAAAAAAAAAAATGGAGTTTCCATGATGAGGGAAAAGAAAAAACAAAAAGCAGAGAAAAAATTGAAAaagaa                                                                        >  2:66167/1‑139 (MQ=255)
                                                             atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGAt                                                                        <  2:1634650/140‑1 (MQ=255)
                                                             atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAAATTTTTCAGACAAAAACAAAAAATGGAGGTTCCCTGATTAGCGAAAGAAAAAAACAAAAAGCAGGGAATAAATTGGAAGAGAt                                                                        >  2:997693/1‑140 (MQ=255)
                                                             atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAAATTTTTCAGACAAAAACAAAAAATGGAGGTGGCATGATGAGGGAAAAAAAAAAAAAACAAGCAGGGAAAAAAATGACAgagaa                                                                        >  2:580423/1‑139 (MQ=255)
                                                             atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGCGAATTTTTTTAGACAAATAAAAAAAATGGAGGTGGCATGATGAGCGAAAGAAAAAAACAACAAGCAATGAAAAAAATGAAAgagaa                                                                        >  2:46936/1‑139 (MQ=255)
                                                              ttCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGAtt                                                                       <  1:574277/140‑1 (MQ=255)
                                                              ttCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGAtt                                                                       <  1:343479/140‑1 (MQ=255)
                                                                  cGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAAAAAAAAAAATGGAGGTGGCATGATGAGCGAAAAAAATAAACAAAAAGCAGGGAAAAAATTGACAGAGAATGTCg                                                                   >  2:1454584/1‑140 (MQ=255)
                                                                    gTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGGAATTTTTCACAAAAAAAAAAAAACAGGGGGTGGCATTATAAGAGAAAAAAAAAAAAAAAAAGCAGTGAATAAAATGAAAGAGAATGTCGCt                                                                 >  2:776744/1‑140 (MQ=255)
                                                                       gCAAAAAATATAAAACCCCATTTTTAGTGGTAGTTTGTGGCGGGGAATTTTTCCAGACAAATCCAAAAACTGGAGTTGCCATGAGGAGCG‑AAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACt                                                             <  1:1614028/140‑1 (MQ=255)
                                                                        cAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCACACAAAAACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAAAAAACAAAAAGCAGTGAATAAATTGACAGAGATTGTCGCTAACt                                                             >  2:830953/1‑140 (MQ=255)
                                                                             aaTATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTAcc                                                        <  1:371524/140‑1 (MQ=255)
                                                                             aaTATAAAACCACATTTTTAGTGGTAGTTTGGGGGGGTGATTTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCAAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTAcc                                                        <  2:416441/140‑1 (MQ=255)
                                                                                 aaaaaCCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCa                                                    <  1:1597290/139‑1 (MQ=255)
                                                                                         caTTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAAAAAAAAAAATGGGGGTGCCATGATGAGGGGAAGGAATAAACAACAGGCAGTGAAAAAAATGACAGAGATTTTCGCTAACTTTTCCGCCACGAttttt                                            >  2:369/1‑138 (MQ=255)
                                                                                               tAGTGGTAGTTTGTGGCGGTGAATTTTTCCAAACAAATACAAAAACTGGAGTTGCCATGAGGAGCAAAATTAATAAGCAACAGGCAGTAAATAAGTGGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGa                                      <  2:1223262/140‑1 (MQ=255)
                                                                                                 gTGGTAGTTTGTGGCGGTGAATTTTTTCCGACAAATACAAAAAATGGGGTTGGCCTGATTGGGGGAAGGAATAAAGAACAGGGAGGGAATAAATTGGAAGGGATTGTTGCTAAACTTTCCCCCCTGATTTTTATCCCAAt                                    >  2:929771/1‑140 (MQ=255)
                                                                                                 gTGGTAGTTTGTGGCGGTGAATTTTTCCAGAAAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTCCCGCCATGATTTCTACCCGAAt                                    <  1:235033/140‑1 (MQ=255)
                                                                                                   ggTAGTTTGTGGCGGTGAATTTTTCCAGACAAATAAAAAAACTGGAGTTGCCATGATGAGGGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGc                                  <  2:201399/140‑1 (MQ=255)
                                                                                                    gTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGTGAAAGTAATAAGCAACAGGAAGTGAATAAGTTGCCAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGcc                                 <  1:1677334/140‑1 (MQ=255)
                                                                                                     tAGTTTGTGGCGGTGAATTTTTCCAGAAAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAAAAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCt                                <  2:632427/140‑1 (MQ=255)
                                                                                                         ttGTGGCGGTAAATTTTTCAAGAAAAATAAAAAAACTGGAGTTGCCATGATGAGCAAAAGAAATAAGCAACAGGCAGTAAATAAGTTGACAGAGATTGTCGCTAATTTTACCGCCATGATTTCTACCCGAATGCCtgatg                            <  2:531123/140‑1 (MQ=255)
                                                                                                            tgGCGGTGAATTTTTTCCGACAAAAACAAAAAATGGGGTTGGCATGATGGGGGGAAGGAATAAACAAAAAGCAGAGGATAAATTGACAGAGATTGTCGCTAACTTTACCCCCATGATTTTTACCCCAATGCCTGATGACg                         >  2:89290/1‑140 (MQ=255)
                                                                                                            tgGCGGTGAATTTTTTCAGACAAAAAAAAAAAATGGAGGTGGCATGATGAGCGAAAATAATAAACAACAAGCAGTGAATAAGTTGAAAGAGATTGTTGCTAACTTTACCGCCATGATTTTTTCCCCAAAGCCTGATGACg                         >  2:479042/1‑140 (MQ=255)
                                                                                                             gggggcgAATTTTTCCAGACAAATACAAAAACTGAAGTTGCCATGATGAGCGAAAGTAATAACAACCAGGAGGTAAAAAAGTGAACAGATATTGTCCCTAATTTAACCGCCATGATTTCTACCCGAATGCCTGATGACgt                        <  2:785841/134‑1 (MQ=255)
                                                                                                             ggCGGTAAATTTTTCCAGAAAAAAAAAAAACCTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTAAATAAGTTGACAGAGATTGTCGTAAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACgt                        <  2:1657686/140‑1 (MQ=255)
                                                                                                              gCGGTGAATTTTTCCAGACAAATAAAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACgtg                       <  1:46936/140‑1 (MQ=255)
                                                                                                              gCGGTAAATTTTTCCAAAAAAATAAAAAAACGGGAGTGGCCATGATGAGCGAAAGTAAAAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACgtg                       <  2:996004/140‑1 (MQ=255)
                                                                                                                 gTGAATTTTTTCAGACAAATACAAAAAATGGGGTTGCCATGATGAGCGAAAGAAATAAACAAAAAGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTTTACCCCAATGCCTGATGACgtggtg                    >  2:1277705/1‑140 (MQ=255)
                                                                                                                  tGAATTTTTCCCCACAAAAATAAAAAATGGAGGTGCTCAGATGGGGGAAAGAAATAAGCAACAGGGAGGGAAGAAGTTGAGAGAGAATGTAGGTAACATTACCCCCCAGAGTTTTACCCGAATGCCTGATGAcagggggg                   >  2:143193/1‑133 (MQ=255)
                                                                                                                           ccAGAAAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTaa          <  1:66167/140‑1 (MQ=255)
                                                                                                                             aGACAAATAAAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTaaaa        <  1:587401/140‑1 (MQ=255)
                                                                                                                             aGAAAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGCCAGTGAATAAGTTGACAGAGATTGTCGTTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTaaaa        <  1:199774/140‑1 (MQ=255)
                                                                                                                                   aTACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTa  >  1:994235/1‑140 (MQ=255)
                                                                                                                                    |                                                                                                                                          
CCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTA  >  NC_000913/3206312‑3206582

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑